Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00552 ATGGAATTCGAGTATTTTTCTTCAGCCAGTAGCGATCGTATGCACGATGTGTTCATCAATTTCAGGGGAAAAGACACTCGTAGGAATTTCGTTTCTCATCTCTACGCTGCCCTCTCCAATGCCGGAGTCAACACTTTCCTTGACGAAGCAGATTTTCCCAAGGGAGCGGATCTAAAAGATGGACTATTAGATAGGATTGCAAGCTCCCGGATATGTGTCGTTGTTTTCTCCAGAAACTACACTGAATCTTCTTGGTGTCTTAACGAGTTGGAAAAAATCATTGAATGCCACAAAACTTATGGCCACATAGTTTTGCCTGTATTTTACCATGTTGTTCCCTCCCAAGTTCGTCATCAAACTGGAGATTTTGGAAATGTTTTGAAAGCATTTGCACAGGAAAGATCGTGGGGTGAATCGGTGATGTCGAGGTGGAACACCGCACTCACCGCAGCAACAAATTTTTCTGGTTGGAATGCCAGAAATACCAGGAACCAGGCTCAATTAGTGGGCGAAATTGTTGAGGTCGTTCTCAAAAAACTAGACAACGCATCTATGTCTATTACTGAATTTCCTGTTGGCTTAGAATCCCGTATTCAAGAAGTGATTGGCTTTACTAAAAGAGAATTCTCCACAGTTTGCATCATAGGGATATGGGGAATGGGAGGGTTGGGTAAAACTACCACAGCCAAAGCCACCTTCAATCGGATTCATCGTAGATTCACGGATAAATGTTTCATTGAAGATATTCGAGAAGTTTGCGAAACAGATCGTAGAGGCCATGTTCATTTGCAAGAACAACTTCTTTCGGGCATCCTCAAAGCAAAGGTGAACATAACAAGCGTTGGGATGGGAAGGGACATGTTGGAGAATAAACTTTCTGTAAGAAAGGCACTCATTGTTCTTGATGATGTTAATGAGTTTGGCCAATTAAAAGACCTATGTGGAAATCGTAAATGGTTTGGTCATGGAAGTGTAATAATCATTACGACTAGAGATGTACGCCTTCTTAAGAAACTTAAAGTTGATTATGTGTATAAGATAGAGGAAATGAACGAAAATGAGTCCCTTGAACTTTTTAGTTGGCATGCTTTTAGAGAAGAAAAACCGAAAGAAGACTTCAATGAAGTTGCAAGAAGTGTAGTTGGTTATTGTGGAGGACTACCTCTAGCTTTGGAGGTTCTTGGTTCTTATTTGAGTGAGAGGACAAAGAAGGAGTGGAAAAGTGTGTTGTCAAAGCTAAAAAAAATTCCCAATAATCAAGTTCAAGAGAAACTGAGAATAAGTTTTGACGGTTTACGCGATCAGATGGAAAAGGATATATTTCTTGATGTATGTTGTTTCTTTATTGGTAAAGACAGAGGCTATGTTACAGATATACTAAATGGCTGTGGACTACATGCTGATATTGGAATAACAGTTCTCATAGAACGTAGCCTCATAAAAGTTGTAAAGAGTAACAAACTCGCAATGCATGATTTGCTAAGAGACATGGGACGAGAGATTATTCGGGAAAGTTCAGCAAAGAGACTAGGGAAGCGCAGTCGATTGTGGTTTCATGAGGATGTAGTTGAAGTATTGACAAAAAATACTGGGACAGAAGCTATTGAGGGATTGACTCTGAAATTGCAGTTAACCAGCAGAGGTTGCTTCAATACTTCTGTTTTTAAGAAAATGCAGAGGTTGAGATTATTACAACTTGATCATGTAAACCTCACTGAAGATTATAGGTATCTTCCTAAGCAACTGAGATGGATCTATTGGAAAAGATTTCCTTTAAAGTACATACCTCACGACTTTTATTTGGAAAGAGTAATTGCGATTGATTTAAGGCACAGTAATCTTAGACTAGTCTGGAAAGAACCCCAGGTTTTTCCGTGGATGAAAGTCCTCAATCTTAGTCATTCCAAGTACTTGATCAAAACCCCTGACTTTTCAGAATTACCAAGTCTTGAAAAACTCATTCTCAAAGATTGTCCAAGTTTGTGCGATGTACACCAGTCCGTTGGGAATCTCCAAAATCTTCAATTGATAAATTTGAAGGACTGTACAAGACTTAGCAGTCTCCCAAGACAAACATACAAGTTGAAATCTTTGAAAACTCTCATCCTATCTGGTTGTTTGAAGATAGACAAATTGGAAGAAGATATAGGGCAAATGGAATCCTTGAGAACTCTACTTGCTAAAAATACTGCAGTGAAACAAGTTCCCTTTTCAGTAGTAAGATCAAAAAGCATTGGATATATATCCCTATGTGGATTTGAAGGATTATCACGTAATGTTTTTCCTTCTATCATTTGGTCTTGGATGTCACCAACAATGAATCCTCTATCTCGTATTCATTCATTTAGTGGCACTTCATCATCTCTTGTCTCCATGGATATGCAGAACAACGATTTGAGTGATCTAGCACCAGTGCTTAGCAATCTTTCAAATCTCCGAAGTCTTTTGGTGCAATTCAATACAGAGGTTCAATTATCTAAACAATTAAGAACAGTTCTGGATGGTGTATATGATGTAAATTTTCCTGGGTTAGAAGTAACATCATACACATCACAAATTTCAAAGGATTGCTTGAAGTCTTATTTGATTGGCATTGGAAGTTACGAAGAAGTCTTCAATACTATATGCAAGAGCGTATCTGAGGGATTGGCAACCAGCGAATCTTGTGATGTTTTACTCCCAGGTGACAATTATCCTTATTGGTTGGCCCAAACAGGAGAGGGACGTTCAGTGTCTTTCATTGTGCCTGACGATTGTTGCATAAAGGGAATGGCTTTGTGTGTTGTGTATTTTTCAACCCCTGAAAACACGATGACTGAATATCTTGTTAGTGTCTTAATGGTTAATTACACAAGGTGCACCATCCAGATATACAAGCATGACACAGTAATTTCCTTTAATGATGAAGATTGGCGTTGCATAATGTCACACTTAGGATCTGGAGAAAAGGTGGAGATTTTTGTGACTTTCGGGCATGGATTTGTAGTGAAGAAAACAGCTGTCTATCTAATGCGTGATGAATCAAGTGATATGGAAGTGGGTCTTTCTCCTAAGCCAAATAAAAATCTGTTTGTAAGATTCATGAAAAAAATTGTCTCGAGTAAGAATCAAGAACATGTGCCAACCAATTTCAAATTCATAGGGAGCATGCCATTGCTTCTGACCATCACTGAATTCGACCCCTCAGTTGAACCATTACAAGTTATGGACTCTCGTACCACCATGAGACATTCGCAGCTAATTCCTCAAGTTTTAATTCAATCTTTAGATTCTTCTAATGCTAGCTGGGAGGATGTTAAAAAGATTAAAGAAATTTTTCCTAAGTTCAACCTTGAGGATAAGGTTGCTTTCGGTGGAAATGGTATTGTTATTGTCGCTGCTGAAATCAAGAAGCTGCTACTGTTCATATACAATGATTTCATTACTTCTATTCATCGTCTCGTTATTAACCATATTCACTTGCTCCTACAACTCTATCGATACCAAATTGAATCAACTTTCTTTCTTGCTTTTACCGTCTTGGTCTTGTTTCATCGAAGTGCATCAACAATGTCTTACACTTCATCATCCTCAAAATCTAAGCCCCGATGGTTATACGATGTGTTCATCAGCTTCCGGGGGGAAGACACTCGTAAGAATTTCGTTTCTCATCTCTATTCCGCACTTTCAAATGCCGGGGTCAATACTTTTCTGGATGATGAGAAGCTTGCCAAGGGACAACAGCTGAAAACAGAACTGTTTCATGCAATAGAAGGGTCTCAAATTTCCATTGTTGTTTTATCCGAAAACTACATTTACTCTACATGGTGTCTCGACGAACTTGTCAAAATCATGGAATGCCATGCTTTTAGAGGTCAAGTGGTTTTGCCCGTGTTTTACGGCGTTTTCCCTTGGTTTTTACGTAGCCTGTACGATGTTTCTTTTGAAGTCATTCTGGAAAAAGCTAGTGACCTCCACCGGGTGAAACAATGGAAGAAAGCACTGGGCGAAGCAGCAGGTTTTGCAGGTTGGGATGTTTCAAATTATAGAAATGAAAACTTTGTTGTGAAGGAAATTGTTAGTGAAGTTTTGGAAAGACTAGATAGAACATACATGTCTATTACAGACTTTCCAGTTGGATTGGACTGTCGTGTGGAACATTGTATTGGCTTTCTAAGAAAGGAAACAAGAGGAGCTTATATACTAGGGATTTGGGGAATGGGAGGGATTGGTAAAACAACCATAGCCAAAGCCATCTACAATGAAATTCGATGTGAATTTAAACATAAAAGTTTCCTAGCAAATATTAGAGAAGTTTGGCAAAGAGATCAAGGGCAGACTGATTTACAAGAACGACTTCTTTCAGATATCCTGAAAACAGAAAAGGTGAAGGTTTATAGCAGTGATTGGGGAAAAGCTATGATCAAGGAAACGCTTTGCACCAAAAGAGTACTTGTTGTACTCGATGATGTTAATACATTGGAACAATTAAGTGCACTATGTGGAAATGGTAATGGGATTGTTCAAGGAAGTGTAATAATCATTACAACAAGAGATGTACGTCTGCTCAATGTTCTTGATGTTGACCAAGTATATGAAGTGGAGGAAATGAATGAGATTGAGTCCCTTGAACTTTTCAGTTGGCATGCTTTTAAGGAAGCAAATCCACCAGAAGCTTTCCTTGAACTCTCAAAACAAGTAGTCACTTACTGTGGAGCACTACCTCTAGCTCTTGAAGTTCTTGGATCTTATCTGTACAAGAGAAGAGAAAAACAGTGGCAAAGTGTATTATCAAAACTAAAAGAAATACCAAATGATAAAATACAAGAGAAATTGAAAATAAGCTATGATGGTTTAACCGATCATACGGAGAAGGACATATTCCTTGACATATGTTGCTTTTTTATCGGTAAGGACAGAGGCTATGTCACAGAGATACTAAATGGCTGTGGACTTCATGCTGAAATCGGAATAACAGTCCTGGTAGAAAGGAGCCTCATAAAAATTGAAAAGAATAACAAATTTGGGATTCATGATTTGCTAAGAGACATGGGAAGAGAAATTGTTCGTCAAAGTTCACCGCTAGAACCTCAGAAGCGCAGTCGATTGTGGGTTCATGATGATGTACTTGATATATTGAGTGAACAAACTGGAACCGGAGTCATTGAGGGATTGGCTTTGAAGATGCAAACAACCGGCGGAGTTTGTTTCAGTACTGAAACATTTGAGAAGATGAAGAGACTGAGACTTCTGCAACTTGATCATGTACAACTAGCTGGAGATTATGTACATCTTCCCAAACAACTGAGATGGGTTCATTGGAAAGCATTTTCATTAACCCACATACCGGAAAACTTTTATCAGGAAAACATAGTCGCCATTGACTTAAAATATAGTTATCTTAAACTAGTATGGAAGGTGCCCCCGTTTCTGGAGAGGCTAAAATTTCTCAATCTTAGTCATTCCAAGTACTTATCAAAGACCCCAGATTTTTCAAAGCTACCAAATCTTGAGAAGCTCATTCTCAAAGATTGTCCAAGCTTGTATGAAGTACACCATTCGATTGGAGATCTAAATAACCTCCTTCTATTAAACTTGAAGGATTGTACTTGCCTTGGTAATCTTCCAATGGTAATCTATAAGTTAAAGTCATTACAAACCCTCATCCTTTCTGGTTGTTCAAATATTGATAAGTTAGAAGAAGACATAGGGCAGATGGAATCCTTAACAACTCTGATGGCAGAAAATACTAGTCTAACACAAGTGCCTTTTGCCATAGTAAGATCTAAAAAGATTGGATACATATCCCTTTGTGGATACGAAGGATTGGCACGAAATGTATTTCCTTCTCTCATATGGTCTTGGATGTCACATACAAGAGGAACTTTATCCAGTATTCAACCATTTGGGGTCATGCCAACGTCTATAGTATCCATGGATATACAGGATAATAATTTGGCTAACCTATTATCAAACTTCAGTGAATTTTCAAAACTTAGAAGTATTTCTGTACAATGCGACTCAGATTTTCAACTAACTCAAGAATTAAGAATAATGCTGCATGGGTTATGCAATGTAAACTCTTCTGGATCGGAAAATGCATATCAATCACCAATTACAGAAAATTCTATGGTATCGAATTTGATTGGAATGGGAAGCTACCAGCAAGTCTTCGATATGCTTAGCAATAGCATATCAAAGGTCTTGAGAACCAGTAGTTCCGCTGATTTTGTGCTTCCAGGGGACAAATATCCTTATTGGTTAGCATATACAGGGGAAGGGCATTCAGTACCTTTTCAAGTTCCTGAAGATAGTGATTGTCGCATGAAGGGAATGCTGTTGTGTGTTGTTTATTCATCAACCCCTGAAAACATGGCAACTCAAGCTCTTACTAATGTGTTCATCTTTAATTACACTAAGTGCACCATTCAGATATATAAGCAAGCAACAACAATGTTCTTTAGTGATGAAGATTGGCAGGGTGTAATATCAAATCTAGGACCCGGAGACAACGTGGAGATTTTTGTAGGTGTTGGTGATGGAATCACGGCTAAGAAAACAGCTGTGTATCTGATATATGGTCAATCAATTACAATGAGAATGGAGTTACTTGGACCAAGTGCACAAGCATCACCGGAGTTGAGTGTGACTCTGTCACCTAAATTGAGTGCACAAGCATCATCTGAGCTGAGTGTGACTCTATCACCTAAATCGTGTGCACAACCAATCACTCATGTGGGGGAGCCCACAAAGAAGCCGCAGGAAAATATATTTGCAAAATTTAGAAACAAAGTGAGAGAATGTTCATGTTTGAACTAG 6798 0.3854 MEFEYFSSASSDRMHDVFINFRGKDTRRNFVSHLYAALSNAGVNTFLDEADFPKGADLKDGLLDRIASSRICVVVFSRNYTESSWCLNELEKIIECHKTYGHIVLPVFYHVVPSQVRHQTGDFGNVLKAFAQERSWGESVMSRWNTALTAATNFSGWNARNTRNQAQLVGEIVEVVLKKLDNASMSITEFPVGLESRIQEVIGFTKREFSTVCIIGIWGMGGLGKTTTAKATFNRIHRRFTDKCFIEDIREVCETDRRGHVHLQEQLLSGILKAKVNITSVGMGRDMLENKLSVRKALIVLDDVNEFGQLKDLCGNRKWFGHGSVIIITTRDVRLLKKLKVDYVYKIEEMNENESLELFSWHAFREEKPKEDFNEVARSVVGYCGGLPLALEVLGSYLSERTKKEWKSVLSKLKKIPNNQVQEKLRISFDGLRDQMEKDIFLDVCCFFIGKDRGYVTDILNGCGLHADIGITVLIERSLIKVVKSNKLAMHDLLRDMGREIIRESSAKRLGKRSRLWFHEDVVEVLTKNTGTEAIEGLTLKLQLTSRGCFNTSVFKKMQRLRLLQLDHVNLTEDYRYLPKQLRWIYWKRFPLKYIPHDFYLERVIAIDLRHSNLRLVWKEPQVFPWMKVLNLSHSKYLIKTPDFSELPSLEKLILKDCPSLCDVHQSVGNLQNLQLINLKDCTRLSSLPRQTYKLKSLKTLILSGCLKIDKLEEDIGQMESLRTLLAKNTAVKQVPFSVVRSKSIGYISLCGFEGLSRNVFPSIIWSWMSPTMNPLSRIHSFSGTSSSLVSMDMQNNDLSDLAPVLSNLSNLRSLLVQFNTEVQLSKQLRTVLDGVYDVNFPGLEVTSYTSQISKDCLKSYLIGIGSYEEVFNTICKSVSEGLATSESCDVLLPGDNYPYWLAQTGEGRSVSFIVPDDCCIKGMALCVVYFSTPENTMTEYLVSVLMVNYTRCTIQIYKHDTVISFNDEDWRCIMSHLGSGEKVEIFVTFGHGFVVKKTAVYLMRDESSDMEVGLSPKPNKNLFVRFMKKIVSSKNQEHVPTNFKFIGSMPLLLTITEFDPSVEPLQVMDSRTTMRHSQLIPQVLIQSLDSSNASWEDVKKIKEIFPKFNLEDKVAFGGNGIVIVAAEIKKLLLFIYNDFITSIHRLVINHIHLLLQLYRYQIESTFFLAFTVLVLFHRSASTMSYTSSSSKSKPRWLYDVFISFRGEDTRKNFVSHLYSALSNAGVNTFLDDEKLAKGQQLKTELFHAIEGSQISIVVLSENYIYSTWCLDELVKIMECHAFRGQVVLPVFYGVFPWFLRSLYDVSFEVILEKASDLHRVKQWKKALGEAAGFAGWDVSNYRNENFVVKEIVSEVLERLDRTYMSITDFPVGLDCRVEHCIGFLRKETRGAYILGIWGMGGIGKTTIAKAIYNEIRCEFKHKSFLANIREVWQRDQGQTDLQERLLSDILKTEKVKVYSSDWGKAMIKETLCTKRVLVVLDDVNTLEQLSALCGNGNGIVQGSVIIITTRDVRLLNVLDVDQVYEVEEMNEIESLELFSWHAFKEANPPEAFLELSKQVVTYCGALPLALEVLGSYLYKRREKQWQSVLSKLKEIPNDKIQEKLKISYDGLTDHTEKDIFLDICCFFIGKDRGYVTEILNGCGLHAEIGITVLVERSLIKIEKNNKFGIHDLLRDMGREIVRQSSPLEPQKRSRLWVHDDVLDILSEQTGTGVIEGLALKMQTTGGVCFSTETFEKMKRLRLLQLDHVQLAGDYVHLPKQLRWVHWKAFSLTHIPENFYQENIVAIDLKYSYLKLVWKVPPFLERLKFLNLSHSKYLSKTPDFSKLPNLEKLILKDCPSLYEVHHSIGDLNNLLLLNLKDCTCLGNLPMVIYKLKSLQTLILSGCSNIDKLEEDIGQMESLTTLMAENTSLTQVPFAIVRSKKIGYISLCGYEGLARNVFPSLIWSWMSHTRGTLSSIQPFGVMPTSIVSMDIQDNNLANLLSNFSEFSKLRSISVQCDSDFQLTQELRIMLHGLCNVNSSGSENAYQSPITENSMVSNLIGMGSYQQVFDMLSNSISKVLRTSSSADFVLPGDKYPYWLAYTGEGHSVPFQVPEDSDCRMKGMLLCVVYSSTPENMATQALTNVFIFNYTKCTIQIYKQATTMFFSDEDWQGVISNLGPGDNVEIFVGVGDGITAKKTAVYLIYGQSITMRMELLGPSAQASPELSVTLSPKLSAQASSELSVTLSPKSCAQPITHVGEPTKKPQENIFAKFRNKVRECSCLN 2265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00552 2265 ProSitePatterns 'Homeobox' antennapedia-type protein signature. 623 628 IPR001827 GO:0003677|GO:0003700|GO:0006355
Viun10g00552 2265 Gene3D - 349 433 IPR042197 -
Viun10g00552 2265 Gene3D - 1529 1613 IPR042197 -
Viun10g00552 2265 SMART till_3 1198 1334 IPR000157 GO:0007165
Viun10g00552 2265 SMART till_3 14 154 IPR000157 GO:0007165
Viun10g00552 2265 Coils Coil 709 729 - -
Viun10g00552 2265 ProSiteProfiles TIR domain profile. 1197 1360 IPR000157 GO:0007165
Viun10g00552 2265 SUPERFAMILY Toll/Interleukin receptor TIR domain 1188 1337 IPR035897 -
Viun10g00552 2265 Gene3D - 1196 1362 IPR035897 -
Viun10g00552 2265 Gene3D - 8 183 IPR035897 -
Viun10g00552 2265 Gene3D Ribonuclease Inhibitor 1719 2041 IPR032675 -
Viun10g00552 2265 SUPERFAMILY L domain-like 1685 1999 - -
Viun10g00552 2265 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 443 IPR027417 -
Viun10g00552 2265 SUPERFAMILY L domain-like 490 821 - -
Viun10g00552 2265 PRINTS Disease resistance protein signature 1564 1578 - -
Viun10g00552 2265 PRINTS Disease resistance protein signature 1394 1409 - -
Viun10g00552 2265 PRINTS Disease resistance protein signature 1471 1485 - -
Viun10g00552 2265 PRINTS Disease resistance protein signature 1873 1889 - -
Viun10g00552 2265 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1360 1624 IPR027417 -
Viun10g00552 2265 Gene3D Ribonuclease Inhibitor 547 851 IPR032675 -
Viun10g00552 2265 Gene3D - 184 344 IPR027417 -
Viun10g00552 2265 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 157 IPR035897 -
Viun10g00552 2265 FunFam Disease resistance protein (TIR-NBS-LRR class) 1195 1362 - -
Viun10g00552 2265 ProSiteProfiles TIR domain profile. 13 180 IPR000157 GO:0007165
Viun10g00552 2265 FunFam Disease resistance protein (TIR-NBS-LRR class) 11 182 - -
Viun10g00552 2265 Pfam TIR domain 15 188 IPR000157 GO:0007165
Viun10g00552 2265 Pfam TIR domain 1199 1369 IPR000157 GO:0007165
Viun10g00552 2265 Gene3D - 1363 1524 IPR027417 -
Viun10g00552 2265 Pfam NB-ARC domain 1378 1602 IPR002182 GO:0043531
Viun10g00552 2265 Pfam NB-ARC domain 210 419 IPR002182 GO:0043531
Viun10g00552 2265 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1199 1956 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00552 Viun-Chr10 5078611 5090905 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00552 10 816 WRKY Transcription Factor Family AT4G12020 28.708 2.68e-82 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00552 - - vun:114165127 4461.75