Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00550 ATGTCCCTTCGCACTGTGGCAGCATTCATGAGTCCAACTTCTTCGATCAATCACACTTTGCTATGTATAAAAGCTCTGCGAGTGTTCAGTTCCACCACCTGTTCGACCATTTGCCTCACCGAAACCAAGGTTGAAGTTGAAGATGATAAAAGCAAATGGACTGATGCTACTGAACTTTTGAGCAAATGGGGTTGCAGTGATGATGATTTGGTGAGAATATTCTCGCGCTGTCCCTCTTTGCGCAATGCTGATCCCTCGATGGTTCAGTCTAAACTGTGCCTGCTTAGTGATTTGGGCTTGCGTGCTTCTCAACTTGTGAAGATTGTCAATTGTAGACCACGATTTTTCCAGAGTCGGAGTAACTCTAGTTTAGAAGAGCGGATTGAACATCTTACATCATTGTTTGAGTCGAGGGATGTGCTTCAGAAGGCCATTGTGAGGAACCCTTCATTGCTGCTATCGGAGGGTCGCTGTAATGTTAAGGCCACAGTTGAGCTCTATGAGAAGTTGGGTGTTAAGAAAGGGGACTTAATTCAGATGCTGCTTTTGCGGCCCACGGTTATTTCAAGGACTTCCTTTGATGCTGAGAAGCTGGAATATTTAAGCAAAACTGGGATTGCTAAGGATTCAAAGATGTATAAATATATGGTGACTTTAATTGGAATCTCTCGCGTAGAAACTATCCGGGAGAAGGTGGCGAATTTCACAAAGTTTGGGTTTTCTGAAGAGGAGATATTTGGTCTTATGGGGAGGTCTCCTAATGTTTTGACATTGTCGACAGACAAGGTTCAGAGGAACATGACTTTCATTTTGGGTACGATGAAGCTTGATGCTAAGATGGTTCTAAAGCAGCCGTATTTATTGTATGCCAACGTGGATACTGTTTTGAAGCCAAGAGTTCTACTAGCATTGAAGATTCAAGATATGGATTCAAAGTGGCAAATCATAGGACCAACGATAGTAAGTTTGCTTAGGATGCCAGAGAAGAGATTTTTGGACTTGTTTGTCAAATGCCATGGCGAGGATGTTGCCAATGAATTGATGGATTTCTATAAAAGGACAAAAGAGGTTAAGAGATTAGGAGATTCATCAAAGAAGTGCAGTAAGAGAGGATTCCCTTTCTGA 1125 0.4231 MSLRTVAAFMSPTSSINHTLLCIKALRVFSSTTCSTICLTETKVEVEDDKSKWTDATELLSKWGCSDDDLVRIFSRCPSLRNADPSMVQSKLCLLSDLGLRASQLVKIVNCRPRFFQSRSNSSLEERIEHLTSLFESRDVLQKAIVRNPSLLLSEGRCNVKATVELYEKLGVKKGDLIQMLLLRPTVISRTSFDAEKLEYLSKTGIAKDSKMYKYMVTLIGISRVETIREKVANFTKFGFSEEEIFGLMGRSPNVLTLSTDKVQRNMTFILGTMKLDAKMVLKQPYLLYANVDTVLKPRVLLALKIQDMDSKWQIIGPTIVSLLRMPEKRFLDLFVKCHGEDVANELMDFYKRTKEVKRLGDSSKKCSKRGFPF 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00550 374 SMART mt_12 71 101 IPR003690 GO:0003690|GO:0006355
Viun10g00550 374 SMART mt_12 142 173 IPR003690 GO:0003690|GO:0006355
Viun10g00550 374 SMART mt_12 210 241 IPR003690 GO:0003690|GO:0006355
Viun10g00550 374 SMART mt_12 246 277 IPR003690 GO:0003690|GO:0006355
Viun10g00550 374 SMART mt_12 278 310 IPR003690 GO:0003690|GO:0006355
Viun10g00550 374 SMART mt_12 106 137 IPR003690 GO:0003690|GO:0006355
Viun10g00550 374 FunFam Mitochondrial transcription termination factor family protein 124 345 - -
Viun10g00550 374 PANTHER CGI-12 PROTEIN-RELATED 49 339 IPR003690 GO:0003690|GO:0006355
Viun10g00550 374 Pfam mTERF 59 152 IPR003690 GO:0003690|GO:0006355
Viun10g00550 374 Pfam mTERF 116 332 IPR003690 GO:0003690|GO:0006355
Viun10g00550 374 Gene3D Transcription termination factor 3, mitochondrial 39 215 IPR038538 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Viun10g00550 mTERF 1.4e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00550 K15032 - gmx:100799629 590.112