Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00547 ATGGCATTCGACTCTTCTTCACCATCATCCAAATCCGAACGGATATACGACGTGTTCATCAATTTCAGGGGGGTAGACACCCGCAAGAAGTTCGTTTCTCATCTCCATTCTTCGCTCTCAAAAGCTGGAGTCAAAACGTTCCTTGACGAGGAGAATCTGCTCAAGGGAATGGAGCTGAAAGAACTATTGCGAGCAATTGAAGTGTCTCAGATAGCAATAGTTGTTTTCTCCAAAAGATACGCTGATTCTAGCTGGTGTCTTGAGGAGCTTCAGAAAATCTTTGAGTGCCGCCAAACTTGTGGCCTAAGAGTTGTGCCCGTATTTTACTATGTTGAACCATCCGAAGTTCGTCAGCAGAAGGGTGATTTTGGAGATGCGTTGCGAGCAGCTGCAAGAAGTGGCTATGCAGGAGAACATCTGGAATTCGCGTTGTCGAGTTGGAGACGCACACTCACCGACGCTGCAAATTTGTCTGGGTGGAATCCGAAGGATTGGAGGACTGAAGCTGAGCTAGTGCGTGACATTGTTAACTACGTTATTGCCAATCTTGATTACAATGCCTTGCCTATCACCAAATTTCCTGTTGGATTAGATCATCCGGTGCAAGAAGTGATTAGATTTATTGAAAGAACCAGAAATTCTTGTAAGATAGGGATATGGGGAATGGGAGGATCCGGTAAAACTACGATTGCCAAAACCATCTACAATAAACTTCATCGTTTATTCGAGAATAAAAGTTTCATTGAAAATATTAGAGAAGTTTGTCAAACAGATAGAAGAAGAGGGCTTGTTCGTTTGCAGGAAAAACTTCTTTCTGATATCCTGAAAGTAAAGGTGGAGATACAAAGCAATGGAATCGGACAAGGTATGATTGAGAACAGATTTATTGGAAAAAGGGCGGTCATTGTTCTTGATGATGTGAATAAGTTTGACCAACTACAAGCACTATGCGGAAATACTCAGTGGATGGGTGAAAGAAGCGTAATAATCATTACAACTAGAGATCTACGTTTACTCAAGAGTTTTGAAGTTGATTTTGTTTATGAAATGAAGGAAATGGAAGCAAATGAGTCCCTTGAGCTTTTTTGTAGGCATGCATTCAGAGAAGAAAAACCAAGAGAGGATTTCAAAGAACTTGCAAAAGATGCAGTTGCTTATTGTGGTGGACTACCTCTAGCTCTTGAAGTTCTAGGTTCTTATTTGAGTAAGAGGACAATGATTGAGTGGAGAAGTGTGTTGTCAAAACTAAAAATAAGTCCCAATACCCAAGTCCAAGAGAAACTGAGGATAAGCTTTGACAGTTTATGTGATCAAATGGAAAAGGAAATATTTCTTGATGTATGTTGTGTTTTTATTGGTAAGGACAGAGGGTGTGTCACGGAGGTACTAAATGGTTGTGGACTATTTGCTGATATTGGAATAACTGTCCTCTTAGAGCGTAGCCTCATAAAAGTCGAAAAGAACAACAAACTCAGAATGCATCATTTGCTACAAGACATGGGAAGAGAGATTATTCGCGAAGGTTCAAACAAAGAACCTGGGAAGCGCAGTAGATTATGGTTTCAAGAGGAGGTGCGTGATGTGTTGACAAATAGTACCGGGACAGATGCTATTGAGGGATTGACTCTGAAATTGAATTTAACGAACAGAGAATGCTTTAAAGCTGATGCTTTCGAGGAAATGAGTAGTTTGAGACTGTTGCAACTTCACCATGTAGAACTCACGGGAGATTATGGTTATCTTTCTAAGCAATTGAGATGGATCTATTGGCAAGGGTTTCCTTCAAAATACATACCTGACAACTTTTATCTGGAAGATGCAATTGCAATTAATTTCAAACACAGTAATCTTAGGCAATTGTGGAAAGAACCCAAGTGTGACACGGAGTTTCAAATAACTAAACAAGTAAGAAAAATTCTGAATGACGTACAAGGGGTACATTTCACTGACTTAGAAATAGCATCCTGTACATCAGAAATTTCAGACAATTCCTTGAGATCTCATTGGATTAGAATTGGAAGCTACCAAGAAGAAGACTTCAATACTCTCAACAAGAGCATAACTAAGGGATTGGCAGCCAGTGGATCTTGTAATGCTTTTCTTCTAGGAGGTAATTATCCTCTTTTATTGGCCCATACAGGCGAGGGACATTCAGTGGATTTCACTGTGCCTGAGGATTGGGACATGAAGGGAATGGCTTTGTGTTTTGTGTATTTATCAACACCTGAAACCGTAGCAACTAAGTGCCTTATTAGTGTCGTACTGGTTAATTACACAAAGTGCAGCATCCAGATATACAAGCGAGACACGGTCATTTCCTTTAATGATGCAGATTGGCAGGGCATAATATCTCATTTGGAAGCTGGAGACAAGGTGGAGATTTTTCTGTCTTTTAGGAATGAATTGGTGATAAAAAACACAGCTGTCTATCTTCTAAAAAAACCTGTTATGAAGGTTTATAGCAGGAAGAGGAATCTTAAGGATCAAGAAAGCAGCCGGAAGAGACAAGGGTAA 2514 0.401 MAFDSSSPSSKSERIYDVFINFRGVDTRKKFVSHLHSSLSKAGVKTFLDEENLLKGMELKELLRAIEVSQIAIVVFSKRYADSSWCLEELQKIFECRQTCGLRVVPVFYYVEPSEVRQQKGDFGDALRAAARSGYAGEHLEFALSSWRRTLTDAANLSGWNPKDWRTEAELVRDIVNYVIANLDYNALPITKFPVGLDHPVQEVIRFIERTRNSCKIGIWGMGGSGKTTIAKTIYNKLHRLFENKSFIENIREVCQTDRRRGLVRLQEKLLSDILKVKVEIQSNGIGQGMIENRFIGKRAVIVLDDVNKFDQLQALCGNTQWMGERSVIIITTRDLRLLKSFEVDFVYEMKEMEANESLELFCRHAFREEKPREDFKELAKDAVAYCGGLPLALEVLGSYLSKRTMIEWRSVLSKLKISPNTQVQEKLRISFDSLCDQMEKEIFLDVCCVFIGKDRGCVTEVLNGCGLFADIGITVLLERSLIKVEKNNKLRMHHLLQDMGREIIREGSNKEPGKRSRLWFQEEVRDVLTNSTGTDAIEGLTLKLNLTNRECFKADAFEEMSSLRLLQLHHVELTGDYGYLSKQLRWIYWQGFPSKYIPDNFYLEDAIAINFKHSNLRQLWKEPKCDTEFQITKQVRKILNDVQGVHFTDLEIASCTSEISDNSLRSHWIRIGSYQEEDFNTLNKSITKGLAASGSCNAFLLGGNYPLLLAHTGEGHSVDFTVPEDWDMKGMALCFVYLSTPETVATKCLISVVLVNYTKCSIQIYKRDTVISFNDADWQGIISHLEAGDKVEIFLSFRNELVIKNTAVYLLKKPVMKVYSRKRNLKDQESSRKRQG 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00547 837 ProSiteProfiles TIR domain profile. 14 183 IPR000157 GO:0007165
Viun10g00547 837 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 647 IPR044974 GO:0006952
Viun10g00547 837 Gene3D - 183 347 IPR027417 -
Viun10g00547 837 Gene3D - 353 436 IPR042197 -
Viun10g00547 837 PRINTS Disease resistance protein signature 216 231 - -
Viun10g00547 837 PRINTS Disease resistance protein signature 294 308 - -
Viun10g00547 837 PRINTS Disease resistance protein signature 559 575 - -
Viun10g00547 837 PRINTS Disease resistance protein signature 387 401 - -
Viun10g00547 837 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 160 IPR035897 -
Viun10g00547 837 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 446 IPR027417 -
Viun10g00547 837 SMART till_3 15 157 IPR000157 GO:0007165
Viun10g00547 837 Pfam NB-ARC domain 200 432 IPR002182 GO:0043531
Viun10g00547 837 SUPERFAMILY "Winged helix" DNA-binding domain 423 529 IPR036390 -
Viun10g00547 837 Pfam TIR domain 16 179 IPR000157 GO:0007165
Viun10g00547 837 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 185 - -
Viun10g00547 837 FunFam Disease resistance protein (TIR-NBS-LRR class) 354 436 - -
Viun10g00547 837 Gene3D - 9 182 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00547 Viun-Chr10 5001182 5007346 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00547 8 634 WRKY Transcription Factor Family AT4G12020 29.212 2.14e-67 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00547 - - gmx:100815297 823.157