Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00539 ATGTTTTATCAAAAAACTATCTTCTTGAAGGTTCTGGTGTCGCTAAAAGTCCTCAATCTCAGTCACTCCTTGTACTTGACAGAAACCCCTGACTTTTCGAGACTACCGAGTCTTGAACAACTCATTCTCAAAGATTGCCCCAGATTGAGCCAAGTACACCAATCTATTGGATGTCTCTGCAATCTTACACTTCTAAATTTGAAGGATTGTACAAGTCTAAACAACCTCCCAGAGGAGATATATAGGTTGAAATCTTTAAAAACTCTCATTCTCTCTGGTTGTTCAAAGATAGGCCTAATTGAAAAAGATATAGGACAAATGAAATCCTTGATAACTCTGATTGCTGAAAATACAGTTGTTAAACAAGTTCCTTTTTCCATTGTAAGCTCAAAATGCATTGGACATATATCCCTACATCATTTTGAGGGATTGTCATATAATCTTTTTCCTTCTATCATTAGGTGTTGGATGTGGCCAACATTGAATCCCCTATCTTATATTCCTCCGTTTTGCATGGATAAGGATCATAATAGTGGGGATGACATTATGCCACTATTTAACACCCTTGCAAATCTTCGAAGTGTTTTGGTTCAATGTGACACCGAGTTTCCACTATCTAAGCAAGTAAAAACTACTCTGGTGGAATATGTTGTAAATATTTCAGAATCAAGAATTTCAAAGCATCACTTCAGGTTATCTTTGATTGGCTTTGGAAGACACAGTGAATTCTTCAGTACTGTGAGAGATAGCATATCTCAGGTATTTGCAAGCAGTGAGTCAAGTGATGTTTCTCTCCCTGGCGACAATGATCCATATTGGTTGGCCCATATGGGTGAGGGACATTCTGTTTCTTTCACTTTGTCTCAGGATCGTGTCATGAAGGGAATGGCTTTGTGTGTTGTTTATTTATCAACCTCCAAAATCATTGAACCTATAGTTACTGCTGTCTTAATTGTTAATCACACAAAGTGCACATTACAAATGCACAACCATAGCTCAGTAATGTCCTCTAACGATGAAGATTGGGATTTCATAATGTCAAATTTAGGATATGGAGACAAGGTGGAGATTTTTGTAACTTTTGGTCACGGATTGGTGATCAAGAAAACTGCTGTCTATCTTATATATAGTGAATCAAATCGCTTGGAAATGGAGCCTTGTCCTGAGAAAAGGAAAATGCTTTAA 1185 0.373 MFYQKTIFLKVLVSLKVLNLSHSLYLTETPDFSRLPSLEQLILKDCPRLSQVHQSIGCLCNLTLLNLKDCTSLNNLPEEIYRLKSLKTLILSGCSKIGLIEKDIGQMKSLITLIAENTVVKQVPFSIVSSKCIGHISLHHFEGLSYNLFPSIIRCWMWPTLNPLSYIPPFCMDKDHNSGDDIMPLFNTLANLRSVLVQCDTEFPLSKQVKTTLVEYVVNISESRISKHHFRLSLIGFGRHSEFFSTVRDSISQVFASSESSDVSLPGDNDPYWLAHMGEGHSVSFTLSQDRVMKGMALCVVYLSTSKIIEPIVTAVLIVNHTKCTLQMHNHSSVMSSNDEDWDFIMSNLGYGDKVEIFVTFGHGLVIKKTAVYLIYSESNRLEMEPCPEKRKML 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00539 394 Gene3D Ribonuclease Inhibitor 5 201 IPR032675 -
Viun10g00539 394 SUPERFAMILY L domain-like 12 166 - -
Viun10g00539 394 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 11 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00539 Viun-Chr10 4755313 4759752 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00539 12 162 WRKY Transcription Factor Family AT4G12020 35.762 1.08e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00539 - - vun:114167018 784.637