Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00537 ATGGCATGTCCAGGTGGAGCCACGCACTCACCAAAGCTGCAAATTTCTTTGGATGGGATGAGAGCAATTACAGTTGGATTACAATCCCACGTGGAAGATGCGATTCAAATTATTAAAAATAAATCCTCGGAAGTTTGTAGGATAGGGATATGTGGAATGGGAGGATCGGGTAAAACAACCCTCGCCAAAGCCATCTATAATCAAATTCAGGGTACATTCATGGAAAAAAGTTTCATTGAGGACATTGCACAAGTTACTCAAACAAGAGGGCGTGTTCATTTACTAGAACAACTTCTGCATGATGTCCTAAAAACGAATGTGGATAGCGTTCAAATGGGAAGAAGTATGATTCGGGAAAGACTTTATGGAAAAAGGGTGCTCATTGTACTAGACGATGTGAATGAGTATTTTTGTTTTTCATATATGAATGAGTATGGTCCATTAGACCTATGGAACAGTCCATGGTTCGGTAAAGGAACTGTAATAATCATTACAACAAGAGATGCAGCGCTACTGACCATGGAACATGTTTACTCTATTATTCGGATAAACGAAATGAATCCAAACGCGTCTCTTAAGCTTCTTAGTTGGCACGCATTTAGAGAAGCAAAACCAAAAGAGGAATACCATCTCCTTGCAAAAAGAGTAGTTGATTATTGTGGAGGACTACCTCTAACTCTTGAAGTAATTGGAAGTTATTTATATGAAAGGTCGATAGAAGAATGGACTAAAGTTTTGTCAAGATTAGAAAATATTCCCCAGCATGAAGTTCCACAAATATTGAAAATAGGCTTTGATGGTTTACGTAATCAAATGGAAAAATATTTATTCCTTGATATATGTTGTTTCTTTGTTGGTAAAGACAGAACCTATGTTACCAAGATCCTAAATGGCTGTGGAGTAGACCCTGATAGTGGAATAAGAGTTCTCATAGAGTGTAGTCTCATAAAAGTTACAAAGAACAACAAATTTGGAGTGCATCCCTTGCTACAAGATATGGGAAGAGAAGTTATTCGTGAAATTTCAAGAAAGGAACCCCGGAAGAACATTGAGTTGGTGCTTGATAAGGATACGAAATATGCACTGTTAGAGAATACTCTCTTTTCATCCCAGGGAACAAATGTCATTCAGGGATTGTCTGAGAAACGGTTTTTAACCAGTACAGGTTGCTTCAAACCTTATTCTTTACAAGCAACGAAAATGTTGAAATTCATTGGAGATTCTGAGTACGTTTCTAAGAAACTGAGATGGTTCATCTTGCGGGGGTTTCCTTTAGAATACCTACCTAACGACTTTTATCTGCATGATGCAATAGCCATTGATTTAAAACACAATCTTCTTCGATTCGTCTGGAAGCAACCCCAGGTTTTGACGTGCCTAAAAGTCTTGAATCTTAGTCACTCCCGGTACTTGCAACAAACCCCTGACTTTTCGAGATTACCAAGTCTTGAACAACTCATTCTCAAAGATTGTCCAAGATTGCGTGAAGTACACCATTCTATTGGATGTCTTTGTTATCTTACACTTCTAAATTTGAAGGATTGTACTAGTCTAATCAATCTCACCATAGAGATATATAAGTTGAAATCATTAAAAATTCTCATTCTATCTGGTTGTTCGAAGGTTTCCCTGTTGGAAAAAGATATTGTGCAAATGGAATCCTTGATAACTCTAATTGCCGAAAGTACAGCTGTGAAAGAAGTGCCATTCTCAATTGTAAGCTCAAAAAGCATTGGATATATATCTCTACGAGGATTTCAGGGATTATCACATAATCTTCTTCCTTCTATCATTCGTTCTTGGATGTTGCCAACAATGAAATCCCTATCTTATATTCATTCCTTTTGTATGGATATGGAAGATAATAGCTGGGATGATATTGCGCCATTGCTTAGCACCCTTGTAAATCTTCGAAGTGTTTTGGTGCAATGTAACACCGAGTTTCAACTATCAAAGCAAGTAGAAACTATTCTGAACGAATATTCTCTAAATATTACAAAATCAGGAACTTCAACACATCACTTGAAGTTTTCTTTGATTGGTGTTGGAAGATGCAAAGATATCTTCAATGCTATTAGCGATAGCATTTCTGAGGCATTGGCAAGCAGTAAGTCAAGCGTTGTTTCTCTCCCAGGTGACAATGATCCTGATTGGTTGGCCCATATAGGTGAGGGACCTTTTGTTTCTTTCACTGTGCCTCAAGATTGTGAGGTGAAGGGAATGGCTCTGTGTGTTGTTTATTTATCAACCCCTGGAATCGTGACAACGGAATATCTTACAAGTGTCTTAATTGTTAATTATACAAAGTGCACATTACAGATACATAACCATGGCACGGTAATTTCCTTTAATGATAAAGATTGGGAAGGTATAATATCAAATTTAGGATCAGGAGACAAGGTGGAGATTTTTTATACTTTTAATCTTGAATTGGTTATCAAGAACACAGCTGTCTATCTGATATATGGTGAAACAAATGACTTAGAAAAGGAGTTTGTACCAAAGAAAAAATCCCTCATTAGATTTATGAAGAAAAGTGTAATGTGA 2547 0.3706 MACPGGATHSPKLQISLDGMRAITVGLQSHVEDAIQIIKNKSSEVCRIGICGMGGSGKTTLAKAIYNQIQGTFMEKSFIEDIAQVTQTRGRVHLLEQLLHDVLKTNVDSVQMGRSMIRERLYGKRVLIVLDDVNEYFCFSYMNEYGPLDLWNSPWFGKGTVIIITTRDAALLTMEHVYSIIRINEMNPNASLKLLSWHAFREAKPKEEYHLLAKRVVDYCGGLPLTLEVIGSYLYERSIEEWTKVLSRLENIPQHEVPQILKIGFDGLRNQMEKYLFLDICCFFVGKDRTYVTKILNGCGVDPDSGIRVLIECSLIKVTKNNKFGVHPLLQDMGREVIREISRKEPRKNIELVLDKDTKYALLENTLFSSQGTNVIQGLSEKRFLTSTGCFKPYSLQATKMLKFIGDSEYVSKKLRWFILRGFPLEYLPNDFYLHDAIAIDLKHNLLRFVWKQPQVLTCLKVLNLSHSRYLQQTPDFSRLPSLEQLILKDCPRLREVHHSIGCLCYLTLLNLKDCTSLINLTIEIYKLKSLKILILSGCSKVSLLEKDIVQMESLITLIAESTAVKEVPFSIVSSKSIGYISLRGFQGLSHNLLPSIIRSWMLPTMKSLSYIHSFCMDMEDNSWDDIAPLLSTLVNLRSVLVQCNTEFQLSKQVETILNEYSLNITKSGTSTHHLKFSLIGVGRCKDIFNAISDSISEALASSKSSVVSLPGDNDPDWLAHIGEGPFVSFTVPQDCEVKGMALCVVYLSTPGIVTTEYLTSVLIVNYTKCTLQIHNHGTVISFNDKDWEGIISNLGSGDKVEIFYTFNLELVIKNTAVYLIYGETNDLEKEFVPKKKSLIRFMKKSVM 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00537 848 Gene3D - 12 181 IPR027417 -
Viun10g00537 848 SUPERFAMILY "Winged helix" DNA-binding domain 256 343 IPR036390 -
Viun10g00537 848 SUPERFAMILY L domain-like 409 649 - -
Viun10g00537 848 Gene3D Ribonuclease Inhibitor 393 694 IPR032675 -
Viun10g00537 848 PRINTS Disease resistance protein signature 47 62 - -
Viun10g00537 848 PRINTS Disease resistance protein signature 526 542 - -
Viun10g00537 848 PRINTS Disease resistance protein signature 120 134 - -
Viun10g00537 848 PRINTS Disease resistance protein signature 220 234 - -
Viun10g00537 848 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 25 569 IPR044974 GO:0006952
Viun10g00537 848 Gene3D - 186 276 IPR042197 -
Viun10g00537 848 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 280 IPR027417 -
Viun10g00537 848 Pfam NB-ARC domain 29 254 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00537 Viun-Chr10 4716753 4720236 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00537 25 518 WRKY Transcription Factor Family AT5G45050 30.303 4.45e-55 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00537 - - vun:114165123 1009.98