Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00530 ATGCACATCCAACAACCTATTCTCAATCTGTGTCGGGTAGCAATTGTTGTTTTCACCAAAACCTATTCTCAATCTGCTTGGTGTCTTCATCAGCTCCAACAAATCATCAAATGGCAAGAAACTTATTCCCGACATGTTTTTCCTGTATATTACGAAATTCAGCCATCCGATGTACGTCTTCAGAAGGGTGATTTTGGAGAAACATTCAAAGAAACTGCACAACAAACATTTTCAGCACAACAACTAGAGCATGGCATGTCCAGGTGGAGCCACACACTCACCAAAGCAGCAAATTTCTTTGGATGGGATGAGAGCAATTACAGGAGTGATGCTGAACTTGTGGACAAAATTGTTGAGGGCGTTCTTAATTTACCAGTCTTGTTTGCTACTAAATTTCCAGTTGGATTACAATCCCGCTTGAACGATGTGATTCAAATTATAAAAGATAAATCCAGGGAAGTTTGTATAATAGGAATATGGGGTGAGGGAGGTTCGGGGAAAACCACCCTTGCCAAAGCTATCTACAATCAACTTCATGGTACATTCACACATAAAAGTTTTATTGAAGATATTTCACAAGTTATTCAAACAAAAGGGCATGTTCATTTACAAGAACAACTACTTTCAGATGTCCTAAACACAAAGATGGAGATACACAGCGTTGAGATGGGAAAAAATAAGATTCGGGAAAAACTTTGTGGGAAAAAATTGCTCATCGTACTTGACGATACCAAATACGATCCATTATTAAACCTACGCGATAGTCATGTATGGTTCGCTAAAGGAACTGTCATAATAATTACAGCAAGAGAAGAACACCTACTAAGGATACCTCAAAATGGTTCTGCTTTTCCAGTAAATCTGTTGAGCACAAATGAGTCCCTTGAGCTTCTTAGTTGGCACGCATTTAGAGAAGCAAAACCAAAACAAGAATACAATGACCTTGCAAAAAGAGTAGTTGTTTATTGTGGAGGACTACCTCTTGCTCTTGAAGTCATTGGAAGTAGTTTATTTGAAAGGACTAAAGAAGAATGGAAGAGTGTATTGTTAGAATTAAAGGAAATTCCTGAGCATGATGTCCATCGGAAATTGAAAATAAGCTTCAATGGTTTACGCAATGAAATGGAAAAAGATTTATTCCTTGATGTTTGTTGTTTCTTTGTTGGTAAAGGCAGAACCTTTGTTACAAAGATCCTAAATGACTGTGGAGTAGATGCTGATAGTGGACTAAGAATTCTCATTGAGCGTAGCCTCGTACAAGTTAAAAAGAACAAGAAATTAGGAATGCAACAGTTGCTACAAAAAATGGGAAGAAAAATTATTTGTGAAATTTCAAGAAAGGAACTTGGAAAGAACCCTCCACTATGGTCTGGTCAGGATGCAGAATATGAACGATTAGAGAATACTCTCTTCTCATCACAACAGACAAAAGTCATTCAGAAAAGATTGTCTTTGAAAATGTTTTTAATTGCCACAAGAGAGTTCGAACGTTATCCTTCAGGGGTAAGAGACACATCAAGGCTTCTGAGACTCTTCAAAGTTTTTGGGAAACTGAGATGGATCAGTTTGCAAGGGTTTTCTTCAGAATACCTACCTAAAGACATTTATCTGCATGATGCAATGGCGATTGATTTAAAACACAGTCTTCTTCGATTCGTCTGGAAAGAACCTCAGGTTTTGAGTTGGCTAAAAGTCCTTAATCTTAGTCACTCCATGTACTTGAGAGAAACTCCTGACTTTTCTGGACTACCACGTCTTGAACAACTCGTTCTCAAAGATTGTCCAAGCTTGCACAAAGTACACCATTCTATTGGATGTCTCAACAATCTTTTATTGCTAAATTTGAAAGATTGTACAAGTCTAAGCAATCTCCCAAGAGAGGTATATAAGTTGAAATCTTTAAACACTCTCATTCTCTCTGGTTGTTCGAAGATTGACCTATTGGAAAAATATATAGTGCAAGTGGAATCCTTGTTAATTCTAATTGCTGAAAATGCAGCTGTGAAACAAGTGCCCTTTTCAATTGTAAGCTCAAAAAACATTGGATATATATTTCTACGTGGATGTGAGGGATTGTCATGTAATCTTTTTCCTTCTATCATTCGGTCTTGGATATCACCAATAATGAATCCCTTATCTTATGTTCACTCATTTTGCATGGATATTGAGGATAATGGTTGGAATGATTTTGACCCATTGCTTAGCACCCTTGCAAATCTTCGAAGTGTTTTGGTACAATGTGACACTGAGTTTCAATTATCTAAGCTTGTTGAAACTATTCTGATCGAATATGGAGTAAATATTTCAAAATCAGAAATTTCACAGCAGCACTTCAAGTATTCTTTGATTGGTGTTGGAAGATGCAAGGATTTCTTCAATGCTGTCAGTGATATCATTTCTAAGGTATTTGCAAGCAATGAGTCACGCGATGTTTCTCTCCCAGGTGATAATGATCCTTATTGGTTCGGCCACATGGGTGAGGGTCGTTCTGTTTTTTTCACCGTGCCTCGAGATCATGACTTGAAGGGAATGGCTTTGTGTGTTGTTTATTTATCAACACCTGAAATTGTGGCCCCTGTATGCCTTAGAAGTGTCTTAATTGTTAATTACACAAAGTGCACATTGCAGATACACAACCATGGCAGGGTAATTTCCTTTAATGATATAGATTGGCAAGGTATAATATCAAATTTAGGACCAGGAGACAAGGTGGAGATTTGTGTGACTTTTGCTCAAGAATTGGTAGTCACGAACACAATTCTCTATCTGATATGTGATGAATTAAATGACTTACAAAAGGAGCCTGCGCCAAAGAAAAATTCCCTCATTAGATTTGTAAAGAAAGTTGTAATGTGA 2856 0.3732 MHIQQPILNLCRVAIVVFTKTYSQSAWCLHQLQQIIKWQETYSRHVFPVYYEIQPSDVRLQKGDFGETFKETAQQTFSAQQLEHGMSRWSHTLTKAANFFGWDESNYRSDAELVDKIVEGVLNLPVLFATKFPVGLQSRLNDVIQIIKDKSREVCIIGIWGEGGSGKTTLAKAIYNQLHGTFTHKSFIEDISQVIQTKGHVHLQEQLLSDVLNTKMEIHSVEMGKNKIREKLCGKKLLIVLDDTKYDPLLNLRDSHVWFAKGTVIIITAREEHLLRIPQNGSAFPVNLLSTNESLELLSWHAFREAKPKQEYNDLAKRVVVYCGGLPLALEVIGSSLFERTKEEWKSVLLELKEIPEHDVHRKLKISFNGLRNEMEKDLFLDVCCFFVGKGRTFVTKILNDCGVDADSGLRILIERSLVQVKKNKKLGMQQLLQKMGRKIICEISRKELGKNPPLWSGQDAEYERLENTLFSSQQTKVIQKRLSLKMFLIATREFERYPSGVRDTSRLLRLFKVFGKLRWISLQGFSSEYLPKDIYLHDAMAIDLKHSLLRFVWKEPQVLSWLKVLNLSHSMYLRETPDFSGLPRLEQLVLKDCPSLHKVHHSIGCLNNLLLLNLKDCTSLSNLPREVYKLKSLNTLILSGCSKIDLLEKYIVQVESLLILIAENAAVKQVPFSIVSSKNIGYIFLRGCEGLSCNLFPSIIRSWISPIMNPLSYVHSFCMDIEDNGWNDFDPLLSTLANLRSVLVQCDTEFQLSKLVETILIEYGVNISKSEISQQHFKYSLIGVGRCKDFFNAVSDIISKVFASNESRDVSLPGDNDPYWFGHMGEGRSVFFTVPRDHDLKGMALCVVYLSTPEIVAPVCLRSVLIVNYTKCTLQIHNHGRVISFNDIDWQGIISNLGPGDKVEICVTFAQELVVTNTILYLICDELNDLQKEPAPKKNSLIRFVKKVVM 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00530 951 Pfam TIR domain 8 121 IPR000157 GO:0007165
Viun10g00530 951 Gene3D - 288 372 IPR042197 -
Viun10g00530 951 Gene3D - 123 280 IPR027417 -
Viun10g00530 951 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 102 IPR035897 -
Viun10g00530 951 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 382 IPR027417 -
Viun10g00530 951 PRINTS Disease resistance protein signature 156 171 - -
Viun10g00530 951 PRINTS Disease resistance protein signature 629 645 - -
Viun10g00530 951 PRINTS Disease resistance protein signature 231 245 - -
Viun10g00530 951 PRINTS Disease resistance protein signature 323 337 - -
Viun10g00530 951 ProSiteProfiles TIR domain profile. 1 125 IPR000157 GO:0007165
Viun10g00530 951 Pfam NB-ARC domain 140 356 IPR002182 GO:0043531
Viun10g00530 951 Gene3D Ribonuclease Inhibitor 506 670 IPR032675 -
Viun10g00530 951 SUPERFAMILY "Winged helix" DNA-binding domain 360 445 IPR036390 -
Viun10g00530 951 SUPERFAMILY L domain-like 509 742 - -
Viun10g00530 951 Gene3D - 3 122 IPR035897 -
Viun10g00530 951 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 667 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00530 Viun-Chr10 4709358 4716477 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00530 561 740 WRKY Transcription Factor Family AT5G45050 31.111 2.15e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00530 - - vun:114165123 1229.16