Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00528 ATGGCGTCTTCAATTCCTCCCACAGAATTCGCCTCTTCAACTTCCAAACTCCCACGGAAGTACGATGTGCTCATCAACTTCACAGGAGAAGACATCCGCAGGAAATTTGTTTCTCATCTCGATTATGCTCTCTCTACTGTTGGGCTCACTACTTTCCTTCATGAGGAGAATGCAGTGAATGACATGCACATCCAACAACCTATTCTCAATCTGTGTCGGGTAGCAATAGTTGTTTTCACCAAAACCTATTCTCAATCTGCTTGGTGTCTTCATCAGCTCCAACAAATCATCAAATGGCAAGAAACTTATTCCCGACATGTTTTTCCTGTATATTACGAAATTCAGCCATCCGATGTACGTTTTCAGAAGGGTGATTTTGGAGAAACATTCAAAGCAACTGCACAAAAAACATTTTCAGGACAACAACTGGAGCATGGCATGTCCAGGTGGAGCCACGCACTCACCAAAGCAGCAAATTTATTTGGATGGGATGAGAGCAATTACAGGAGTGATGCTGAACTTGTGGACAAAATTGTTAAGGGCGTTCTTAATTTACCAGTCTTCTCTGCTACTAAATTTCCAGTTGGATTACAATCCTGCGTGAAAGATGTGATTCAAATTATAAAAAATAAATCCAGGGAAGTTTGTATAATAGGAATATGGGGAGAGGGAGGATCGGGTAAAACCACCCTTGCCAAAGCTATCTACCATCAACTTCATGGTACATTCACACAGAAAAGTTTTATTGAAGATATTGCACAAGTTATTCAAACAAGAGGGCATGTTCATTTACAAGAACAACTACTTTCGGATGTCCTAAACACAAAGATGGAGATACGCAGCGTTGAGATGGGAAAAAAAATGATTCGGGTAAAACTTTCCGGGAAAAAATTGCTCATCGTACTTGACAATACTAAATACGATCCATTATTAGACCTATACGATAGTCATGTTTGGTTCGCTAAAGGAACTGTCATACTAATTACAGCAAGAGAAGAACACCTACTAAGGATACATCAAGTTGATTCTATTTTCCGGATGAATCTGTTGAGCACAAATGAGTCCCTTGAGCTTCTTAGTTGGCATGCATTTAGAGAAGAAAAACCAAAAGAAGAATACAATGACCTTGCAAAAAGAGTAGTTGTTTATTGTGGAGGACTACCGCTAGTTCTTGAAGTCATTGGAAGTTGTTTGTATGAAAGGACGAAAGAAGAATGGAATAGATTATTGTTACAATTAGACAAAAGTCCCCAACATGAAGTTTCACAGACATTGAAAATAAGCTACGAAGGTTTACTTAATCAAACGGAAAAAGATTTATTCCTTGATGTATGTTGTTTCTTTGTTGGTAAAGGCAGAACCTTTGTTACAAAGATTCTAAATGATTGTGGAGTAGATGCTGATAGTGGAATAAGAATTCTCATTGAGCGTAACCTCATACAAGTAAAAAAGAATAACAAATTAGGAATGCAACCGTTGCTACAAAAAATGGGAAGAAAAATTATTCGTGAAATTTCAGGAAAGGAACTTGGAAAGAACGCTCGACTATGGTTTGGTCAGGATGCAGAAAATGATCTGTTAGAGAACACTCTCTTCTCATCACAGCAGACAAAAGTCATTCAGAGATTGTCTTTGAAAATGTTTTTAATAGCCACAAGAGAGTTATTGGAACGTTATCCTTCAATGGTTTTGAGGTCGCTAAGAGTCCTTAATCTTAGTCACTCCATGTACTTGAGAGAAACTCCTGACTTTTCCGGACTACCACGTCTTGAACAGCTCATTCTCAAAGATTGTCCAAGCTTGCGTAAAGTACACCATTCTATTGGATGTCTCAACAATCTTGTATTGCTAAATTTGAAGGACTGTACAAGTCTAAGCAATCTCCCAAGAGAGTTATACAAGTTAAAATCATTAAACACTCTCATTCTCTCTGGTTGTTCGAAGATCGACCTATTGGAAAAATATATAGTGCAAATGGAGTCCTTGATAATTCTAATTGCTGAAAATGCAGCTGTGAAACAAGTGCCCATTTCAATTGTAAGCTCAAAAAACATTGGATATATATTTCTACGTGGATGTGAGGGATTTTCATTTAATCTTTTTCCTTCTATCATTCGGTCTTGGATATCACCAATAATGAATCCCTTATCTTATATTCACTCAATTTGCATGGATATTGAGGATAATGGTTGGAATGATTTTGCACCATTGCTTAGCACCCTCGCAAATCTTCGAAGTGTTTCGGTACAATGTGACACCGAGTTTCAATTATCTAAGCTTGTTGAAACTATTCTGATCGAATATGGAGTAAATATTTCAAAATCAGAAATTTCACAGCAGCACTTCAAGTATTCTTTGATTGGTGTTGGAAGATGCAAGGATTTCTTCAATGCTGTCAGTGATATCATTTCTAAGGTATTTGCAAGCAATGAGTCACGCGATGTTTCTCTCCCAGGTGATAATGATCCTTATTGGTTCGGCCACATGGGTGAGGGTCGTTCTGTTTTTTTCACCGTGCCTCGAGATCATGACTTGAAGGGAATGGCTTTGTGTGTTTTTTATTTATCAACACCTGAAATTGTGGCCCCTGTATGCCTTAGAAGTGTCTTAATTGTTAATTACACAAAGTGCACATTTCAGATACACAACCATGGAACGGTAATTTCCTTTAATGATATAGATTGGCAAGGTATAATATCAAATTTAGAATCAGGAGACAAGGTGGAGATTTGTGTGACTTCTGCTCATGAATTGGTAGTCAAGAACACAATTGTCTATCTGATATGTGATGAATTAAATGACTTACAAAAGGAGCCTGCGCCAAAGAAAAATTCCCTCGTTAGATTTGTAAAGAAAGTTGTAATGTGA 2868 0.3762 MASSIPPTEFASSTSKLPRKYDVLINFTGEDIRRKFVSHLDYALSTVGLTTFLHEENAVNDMHIQQPILNLCRVAIVVFTKTYSQSAWCLHQLQQIIKWQETYSRHVFPVYYEIQPSDVRFQKGDFGETFKATAQKTFSGQQLEHGMSRWSHALTKAANLFGWDESNYRSDAELVDKIVKGVLNLPVFSATKFPVGLQSCVKDVIQIIKNKSREVCIIGIWGEGGSGKTTLAKAIYHQLHGTFTQKSFIEDIAQVIQTRGHVHLQEQLLSDVLNTKMEIRSVEMGKKMIRVKLSGKKLLIVLDNTKYDPLLDLYDSHVWFAKGTVILITAREEHLLRIHQVDSIFRMNLLSTNESLELLSWHAFREEKPKEEYNDLAKRVVVYCGGLPLVLEVIGSCLYERTKEEWNRLLLQLDKSPQHEVSQTLKISYEGLLNQTEKDLFLDVCCFFVGKGRTFVTKILNDCGVDADSGIRILIERNLIQVKKNNKLGMQPLLQKMGRKIIREISGKELGKNARLWFGQDAENDLLENTLFSSQQTKVIQRLSLKMFLIATRELLERYPSMVLRSLRVLNLSHSMYLRETPDFSGLPRLEQLILKDCPSLRKVHHSIGCLNNLVLLNLKDCTSLSNLPRELYKLKSLNTLILSGCSKIDLLEKYIVQMESLIILIAENAAVKQVPISIVSSKNIGYIFLRGCEGFSFNLFPSIIRSWISPIMNPLSYIHSICMDIEDNGWNDFAPLLSTLANLRSVSVQCDTEFQLSKLVETILIEYGVNISKSEISQQHFKYSLIGVGRCKDFFNAVSDIISKVFASNESRDVSLPGDNDPYWFGHMGEGRSVFFTVPRDHDLKGMALCVFYLSTPEIVAPVCLRSVLIVNYTKCTFQIHNHGTVISFNDIDWQGIISNLESGDKVEICVTSAHELVVKNTIVYLICDELNDLQKEPAPKKNSLVRFVKKVVM 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00528 955 Gene3D - 349 432 IPR042197 -
Viun10g00528 955 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 443 IPR027417 -
Viun10g00528 955 PRINTS Disease resistance protein signature 217 232 - -
Viun10g00528 955 PRINTS Disease resistance protein signature 292 306 - -
Viun10g00528 955 PRINTS Disease resistance protein signature 633 649 - -
Viun10g00528 955 PRINTS Disease resistance protein signature 384 398 - -
Viun10g00528 955 SUPERFAMILY "Winged helix" DNA-binding domain 420 522 IPR036390 -
Viun10g00528 955 Gene3D - 18 185 IPR035897 -
Viun10g00528 955 ProSiteProfiles TIR domain profile. 19 186 IPR000157 GO:0007165
Viun10g00528 955 Pfam NB-ARC domain 201 429 IPR002182 GO:0043531
Viun10g00528 955 Pfam TIR domain 20 182 IPR000157 GO:0007165
Viun10g00528 955 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 163 IPR035897 -
Viun10g00528 955 SUPERFAMILY L domain-like 540 747 - -
Viun10g00528 955 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 663 IPR044974 GO:0006952
Viun10g00528 955 Gene3D - 186 344 IPR027417 -
Viun10g00528 955 SMART till_3 20 160 IPR000157 GO:0007165
Viun10g00528 955 Gene3D Ribonuclease Inhibitor 527 665 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00528 Viun-Chr10 4673723 4677652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00528 556 679 WRKY Transcription Factor Family AT4G12020 37.600 1.78e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00528 - - vun:114165880 1183.32