Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00513 ATGGAATTCGCGTCTTCATCATCCAACCTCCAACGGAAGTACGATGTGCTCATCCACTTCGATGGAGAAGATATCCGCAGAAAATTTGTTTCTCATCTCGATTTCACCCTCTCTGCTGTTGGACTCACCACTTTCCTTCATCAGGAGAATGCAGTGAAGGGAATGAAGATCCAAGAACCTATTCTCGACTTCTGTCGTGTAGCAATTGTTGTTTTCACCAAAACCTATTCTGAATCTGCTTGGTGTCTTCATCAACTTCAACAAATCATTCAATGGCATGAAACTTATTCCAGACATGTTCTGCCGGTATATTACGAAATTCAGCCATCTGATGTTCGTCTTCAGAAAGGTCATTTTGGTAAAGCCTTCAAAGCAACTGCACACCAAACATTCTCAGGACAAGAACTGGAACATGGCATGTGCAGGTGGAGCCGCGCACTCACCAAAGTTGCAAATTTCTTTGGATGGGATGATAGCAATTACAGGAGTGATGCTGAACTAGTGGACAGAATTGTTAAGAGCGTTCTTAATTTACCAATCTTGTCTGCTACTGAATTTCCAGTTGGACTAGAGTCCCAGGTGAAAGATGTGATTCGAACCATCAAAAGTAATCCCAGGAAAGTTTGTATCATAGGGATATGGGGAATGAGAGGATCGGGCAAAACTACTCTTGCAAAAGCCATTTATAATCAAATTCATGGTACATTCACGGAGAAAAGCTTCATCGAGAATATTTCAGATTTTAGTCAAAGAAGGCATCTTAATTTACAAAAACGACTTCTTTCAGATATCCTGAAAACAAAGATAAATATACATAGCGTTGAGATGGGAAGAAGTATGATTCGAGAAAGACTTTATGGGAAAAGAGTGCTCATTGTACTTGACGATATGATCGATGAGCATTATCCATTATTAGACTTAAGGATATGTCGTGCATCGCTCGGTGGAGGATCTGTAATAATCCTTACAACAAGATATAAAGACATACTGAGGAAACATGGAGTTGATGCTGTTTTTGGGAAGAATCTATTGAACTCAAACGAGTCCCTTGAGCTTTTTAGTTGGCACGCATTTAGAGAAGCAAAACCAAAAGAAGAATACCATTTCCTTGCAAAAAGTGTAGTTGCTTATTGTGAAGGAAATCCTCTCTCTCTTGAAGTCATTGGAAGTTATTTATATGAAAGGACGAAAATAGAATGGCATAGAGTATTGTTAAAATTAATCGAAGTTCCCCAGTTTGAAATTCTACCGATTTTGAAAATAAGCTTCGATGGTTTACGTGATCAAACGGAAAAAGATTTATTCCTTGATATATGTTGTTTCTTTGTTGGTAAAGGCAGAGCTTATGTAACGAAGATCCTAAATGGCTGTGGAATAGACGCTGATTGTGGAATAAGAGTTCTCTTAGAGCGTAGCCTCATAAAAGTGAAAAGAAACAATAAATTTGGAATTCATCCTTTGGTACGAGATATGGGAAGAGAAATTATTGATGATATTTCAAGAAAGGAACCTAGGAAGAACAGATGGTTGTGGCTTGATGATGATATGAAACATGCACCGTCAAAGTATACCACTGGATATTCTAAGTACCTCTCTAAGAAACTGAGATGTATCAGTTTGCAATGCTTTTCTTCAGAATACCTATGTAACGACTTTTATCTGCATGATGCAATAGTGGTTGATTTAAAACGCAGTCTTCTTGGAATCATCTGGAAACAACCCCAGGTTTTGGCGTTTCTAAAAGTCCTTAATCTTAGTCACTCTAAGTACTTGAGAAAAACCCCTGACTTTTCCGGACTACAAAATCTTGAACATCTCATTCTCAAAGATTGCCCAAGATTGCGTGAAGTGCACCGGTCTATTGGATGTCTATGTAATCTTACACTGCTAAATTTGAAGGACTGTACAAGTTTAAGCAATCTCCCCAGAGAGATATATATGTTGAAATCTTTAAAAACTCTCATTCTTTCTGGTTGTTCCAAGATTAACTTGTTGGAAAAAGATATAGTGCAAATGGAATCCTTGATAACTCTAATCGCGGAAAATACAGTTGTGAAACAAGTTCCTTTTTCAATTGTAAGCTCAAAAGGAATTGGATATATATCCCTACGAGGATTTGAGGGATTATCACATAATCTTTTTCCTTTTATCATTCAGTCTTGGATGTCACCGTCAATGAATTCCCTATCTTATAATCCTTCGTTTTGCATGGATGTGGAAGTTAAAAGTTGGGATGACATTACACCATTGCTTAGCAGCCTTGGAAATCTTCGAAGTGTTTTGGTGCAATGTGACACCGAGTTTCAACTATCTAAGCAAGTGAAAACTATTCTGGTTGAATATCGTGGGAATATTACAGAAATAGGAACTTCAAAGCCACACTTCAGATATTGTTTGATTGGTGTTGGAAGCTGCAAAGAATTCTTTAATGCTTTCAGCGATGGCACTTCTGAGGGACTTGCAAGCAGTGAGTCTTGTGATGTTTTTCTGCCAGGTGGCAATGATCCTTATTGGCTGGTCCATATGGGTGAGGGACATTCTGTTTCTTTCACTTTGCCTAAAGATCACGTCTTGAAGGGAATGGCACTGTGTGCCATTTATTCACCAAACCCTGAAATTTTGACAACTGAGTGTCTTAGAAGTGTCTTAATTGTTAATTATACAAAGTGTACATTGCAGATACATTATCATGGCACGATAATTTCCTTTAATGATATAGACTGGCAAGGTATAATATCAAATTTAGGATCAGGAGACAGAGTAGAGATTTTTGTGATTTTTTGTGATGGATTGGTAGTCAAGAGAACAGTAGTCTATCTGATATGTGGTGAATCAAATGACTTAGAAAAGGAGCCTGGTTAG 2862 0.3791 MEFASSSSNLQRKYDVLIHFDGEDIRRKFVSHLDFTLSAVGLTTFLHQENAVKGMKIQEPILDFCRVAIVVFTKTYSESAWCLHQLQQIIQWHETYSRHVLPVYYEIQPSDVRLQKGHFGKAFKATAHQTFSGQELEHGMCRWSRALTKVANFFGWDDSNYRSDAELVDRIVKSVLNLPILSATEFPVGLESQVKDVIRTIKSNPRKVCIIGIWGMRGSGKTTLAKAIYNQIHGTFTEKSFIENISDFSQRRHLNLQKRLLSDILKTKINIHSVEMGRSMIRERLYGKRVLIVLDDMIDEHYPLLDLRICRASLGGGSVIILTTRYKDILRKHGVDAVFGKNLLNSNESLELFSWHAFREAKPKEEYHFLAKSVVAYCEGNPLSLEVIGSYLYERTKIEWHRVLLKLIEVPQFEILPILKISFDGLRDQTEKDLFLDICCFFVGKGRAYVTKILNGCGIDADCGIRVLLERSLIKVKRNNKFGIHPLVRDMGREIIDDISRKEPRKNRWLWLDDDMKHAPSKYTTGYSKYLSKKLRCISLQCFSSEYLCNDFYLHDAIVVDLKRSLLGIIWKQPQVLAFLKVLNLSHSKYLRKTPDFSGLQNLEHLILKDCPRLREVHRSIGCLCNLTLLNLKDCTSLSNLPREIYMLKSLKTLILSGCSKINLLEKDIVQMESLITLIAENTVVKQVPFSIVSSKGIGYISLRGFEGLSHNLFPFIIQSWMSPSMNSLSYNPSFCMDVEVKSWDDITPLLSSLGNLRSVLVQCDTEFQLSKQVKTILVEYRGNITEIGTSKPHFRYCLIGVGSCKEFFNAFSDGTSEGLASSESCDVFLPGGNDPYWLVHMGEGHSVSFTLPKDHVLKGMALCAIYSPNPEILTTECLRSVLIVNYTKCTLQIHYHGTIISFNDIDWQGIISNLGSGDRVEIFVIFCDGLVVKRTVVYLICGESNDLEKEPG 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00513 953 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 156 IPR035897 -
Viun10g00513 953 Gene3D - 343 427 IPR042197 -
Viun10g00513 953 Pfam NB-ARC domain 191 407 IPR002182 GO:0043531
Viun10g00513 953 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 438 IPR027417 -
Viun10g00513 953 SMART till_3 13 153 IPR000157 GO:0007165
Viun10g00513 953 SUPERFAMILY L domain-like 484 721 - -
Viun10g00513 953 ProSiteProfiles TIR domain profile. 12 179 IPR000157 GO:0007165
Viun10g00513 953 PRINTS Disease resistance protein signature 378 392 - -
Viun10g00513 953 PRINTS Disease resistance protein signature 646 662 - -
Viun10g00513 953 PRINTS Disease resistance protein signature 210 225 - -
Viun10g00513 953 PRINTS Disease resistance protein signature 284 298 - -
Viun10g00513 953 Pfam TIR domain 13 175 IPR000157 GO:0007165
Viun10g00513 953 Gene3D - 176 337 IPR027417 -
Viun10g00513 953 Gene3D - 6 175 IPR035897 -
Viun10g00513 953 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 683 IPR044974 GO:0006952
Viun10g00513 953 Gene3D Ribonuclease Inhibitor 530 691 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00513 Viun-Chr10 4594465 4598483 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00513 12 692 WRKY Transcription Factor Family AT4G12020 26.451 8.59e-57 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00513 - - vun:114165123 1353.19