Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00511 ATGGAATTCGCGTCTTCATCATCCAACCTCCAACGGAAGTACGATGTGCTCATCCACTTCGATGGAGAAGATATCCGCAGGAAATTTGTTTCTCATCTCGATTCCGCCCTCTCTGCTGTTGGATTCACCACTTTCCTTCATGAGGAGAATGCAGTGAAGGAAATGCAGATCCAAGAACCTATTCTCGATCTCTGTCGGGTAGTAATTGTTGTTTTCACCAAATCTTATTCTCAATCTGCTTGGTGTCTTCATCAACTTCAACAAATCATTCAATGGCAAGAAACTTATTCCCGACATGTTCTTCCGGTGTATTACGAAATTCAACCATCTGACGTACGTCTTCAGAAGGGTAATTTTGGTACAGCCTTTAAAGCTACTGCACACCAAACTTTCTCAGACAAACAACTGGAGCATGGCATGTGCATGTGGAGTCACGCTCTCACCAAGACTGCAAATTTCTTTGGATGGGATGAAAGCAATTACAGGAGTGATGCTGAACTAGTGGACAAAATTGTAAAGAGCATTCTTAATTTACCAGTCTTGTCGGCTACTAAATTTCCAGTTGGATTACAATCCTACGTGGAAGATGTGATTCAAATTATAAAAGATAAATCCGCGGAAGTTTGTAGGATAGGGATATGCGGAGTGGGAGGATCGGGTAAAACCACTCTTGCCACAGCCATCTATAATCAAATTCATAGTACATTTACGCACCAAAGTTTTATTGAAGATATTTCAGAAGTTAGCGTAACAAAAAGGGATTATTATATACAAAAACAACTTTTTTCGGATGTCCTAAAAACAAATTTGAAGATACATTGCATTGAGATGGGAAGAAGAATGATTCAGGAAAGACTTTATGGGAAAAAGATGCTCATTGTACTAGACAATGTGAAAGACGATATTTCACTATACATATCGGAATGTAGTGCACTTTTGGGTGAAGGAAGTGTAATAATAATGACAACTAGAAATGAAGACTTACTGAAGAAACTTCAAGTTGATTCTATTTTTCGAATAAAGCTAGGGAACCCAAAAAAGTCAATTGAGCTTCTTAGTTGGCATGCATTTAGGGAAGCAAAACCAAAAGAGGAATACTATTCGCTTGCAAAAAGACTTGTTGCTTACTGTGGAGGACTACCTCTGGCTCTTGAAGTCGTTGGAACATATTTATATGAAAGGACGGAAGAAGAATGGAATACAGTATTGTTGAAATTAGATAATGCTCCTCAACATAAAGTTCTACAGATATTGAAAATAAGCTTTGAAGGTTTGCCTAATCAAATGGAAAGAGATCTATTCCTTGATATATGTTGTTTCTTTGTTGGTAAAGGCAGATCTTATGTTAGGAAGATCCTAAATGGCTGTGGAGTAGACGCTGATAGTGGAATAAAAGTTCTCATAGAGCGTAACCTCATCAAAGTTAAAAAGAACAACAAATTTGGAGTGCATCCTCTGCTACGAGATATGGGAAGAGAAATTATTTCTGATATTTCAAGAAACGAAACTCGTAAACTGTTAGAGAATACTCTCTTTTCATCACAACAGACAAAAATCATTCATAGATTGCGTGGCACAGGAGATTTCTTCGAACGTCACCCTTTAAAGGTAAGAGACCCATCAAGACTGCTTGAACTCCTTGGAGCTTCTGAGTACCATCCTAAGAAACTAACATGGATAAGTTGGCAAGGGTTTCCATCAGAATACCTACCTAACGACTTTTATCTGCATGATGCCATAGCTATTGATTTAAAATACAATCTTCTTCGATTCCTATGGAAACAACCTCAGGTTTTGGAGTCGCTAAAAGTCCTCAACCTCAGTCACTCAATATACTTGACAAAAACCCCTGACTTTTCGACACTACCCAGTCTTGAACAGCTCATTCTCAAAGATTGTCCAAGATTGCGCGAAGTTCACCAATCTGTTGGATGTCTATACAATCTTACACTTCTAAATTTGAAGGATTGTACAAGTCTAAGCAATCTCCCAAGAGAGATATATAAGTTGAAATCTTTGAAAACTCTCATTCTCTCTGGTTGTTCAAAGCTAGGCCTAATGGAGAAAGATATAGGGCAAATGGAATCCTTGATAACTCTAATTGCTGAAAATACAGTTGTGAAACAAGTGCCTTTTTCCATTGTATGCTCAAAAAGCATTGGATATATATCCCTACATCGATTTGAGGGATTGTCACATTATCTTTTTCCTTCTATCATTCGTTGTTGGATGTCGCCAACGATGAATCCCCTATCTTATATTCATTCGTTTTGCATGGATAAGGAGCATAGTAGTGGGGATGATATTATGCCACTATTTAACACCCTTCCAAATCTTCGAAGTGTTGTGGTGCAATGTGACTCCGAATTTCCACTATCTAAACAAGTAAAATCTACTCTGGTCGAATATGTTGTAAATATTTCAGAATCAGGAATTTCAAAGCATCACTTCAGGTTATCTTTGATTGGTTTCGGAAGACATGGTGAATTCTTCAATACTATGAACGAGAGCATATCTAAGGTATTGACAAACAATAAGTCAGGTGATGTTTCTCTCCCAGGTGACAATGATCCTTATTGGTTGACCCATATGGGTGAGGGACATTCTGTTTCTTTTACTTTGCCTCAGGATCGTGTCATGAAGGGAATGACTTTGTGTGTTGTTTATTTATCAACCTCCAAAATCATTGAACCTGAACTTACTGCTGTCTTAATCGTTAATTACACAAAGTGTACATTGCAAATGCACAACCATGGCTCAACAATGTCCTTTAACGATGAAGATTGGGATTGCATAATGTCAAATTTAGGATCTGGTGACAAGGTGGAGATTTTTGTGACTTTTGGTCATGGATTGATGATCAAGAGCACAAGTGTCTATCTTATATATGCTGAATTAAATGACTTCGAAATGGAGCATTGTCCTGAGCCAAAGGAAAATACGTTAAATAAATTCATTAAGAAAATGTTAATGTCTCACTTCTGGTAA 2988 0.3765 MEFASSSSNLQRKYDVLIHFDGEDIRRKFVSHLDSALSAVGFTTFLHEENAVKEMQIQEPILDLCRVVIVVFTKSYSQSAWCLHQLQQIIQWQETYSRHVLPVYYEIQPSDVRLQKGNFGTAFKATAHQTFSDKQLEHGMCMWSHALTKTANFFGWDESNYRSDAELVDKIVKSILNLPVLSATKFPVGLQSYVEDVIQIIKDKSAEVCRIGICGVGGSGKTTLATAIYNQIHSTFTHQSFIEDISEVSVTKRDYYIQKQLFSDVLKTNLKIHCIEMGRRMIQERLYGKKMLIVLDNVKDDISLYISECSALLGEGSVIIMTTRNEDLLKKLQVDSIFRIKLGNPKKSIELLSWHAFREAKPKEEYYSLAKRLVAYCGGLPLALEVVGTYLYERTEEEWNTVLLKLDNAPQHKVLQILKISFEGLPNQMERDLFLDICCFFVGKGRSYVRKILNGCGVDADSGIKVLIERNLIKVKKNNKFGVHPLLRDMGREIISDISRNETRKLLENTLFSSQQTKIIHRLRGTGDFFERHPLKVRDPSRLLELLGASEYHPKKLTWISWQGFPSEYLPNDFYLHDAIAIDLKYNLLRFLWKQPQVLESLKVLNLSHSIYLTKTPDFSTLPSLEQLILKDCPRLREVHQSVGCLYNLTLLNLKDCTSLSNLPREIYKLKSLKTLILSGCSKLGLMEKDIGQMESLITLIAENTVVKQVPFSIVCSKSIGYISLHRFEGLSHYLFPSIIRCWMSPTMNPLSYIHSFCMDKEHSSGDDIMPLFNTLPNLRSVVVQCDSEFPLSKQVKSTLVEYVVNISESGISKHHFRLSLIGFGRHGEFFNTMNESISKVLTNNKSGDVSLPGDNDPYWLTHMGEGHSVSFTLPQDRVMKGMTLCVVYLSTSKIIEPELTAVLIVNYTKCTLQMHNHGSTMSFNDEDWDCIMSNLGSGDKVEIFVTFGHGLMIKSTSVYLIYAELNDFEMEHCPEPKENTLNKFIKKMLMSHFW 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00511 995 Gene3D - 344 426 IPR042197 -
Viun10g00511 995 Gene3D - 175 337 IPR027417 -
Viun10g00511 995 Gene3D - 6 174 IPR035897 -
Viun10g00511 995 SUPERFAMILY "Winged helix" DNA-binding domain 413 499 IPR036390 -
Viun10g00511 995 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 155 IPR035897 -
Viun10g00511 995 ProSiteProfiles TIR domain profile. 12 179 IPR000157 GO:0007165
Viun10g00511 995 Gene3D Ribonuclease Inhibitor 540 695 IPR032675 -
Viun10g00511 995 Pfam NB-ARC domain 193 412 IPR002182 GO:0043531
Viun10g00511 995 SMART till_3 13 153 IPR000157 GO:0007165
Viun10g00511 995 SUPERFAMILY L domain-like 548 784 - -
Viun10g00511 995 Pfam TIR domain 13 176 IPR000157 GO:0007165
Viun10g00511 995 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 701 IPR044974 GO:0006952
Viun10g00511 995 PRINTS Disease resistance protein signature 668 684 - -
Viun10g00511 995 PRINTS Disease resistance protein signature 285 299 - -
Viun10g00511 995 PRINTS Disease resistance protein signature 210 225 - -
Viun10g00511 995 PRINTS Disease resistance protein signature 377 391 - -
Viun10g00511 995 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 436 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00511 Viun-Chr10 4585574 4590413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00511 12 714 WRKY Transcription Factor Family AT4G12020 28.304 4.65e-62 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00511 - - vun:114165123 1305.43