Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00509 ATGGAATTCACCTCTTCAACTTCCAAAATCCCACAGATGTATGATGTGCTGATTAACTTCAATGGAGAAGACATCCACAGGAAATTTGTTTCTCATCTCGATTCTGTTCTCTCTGCTGCTGGACTCACCACCTTCCTTCACCACCAGAATGCAGTCAACGACATGGACATCCAACAGCCTATTCTCAATCTTTGTCGGGTAGCAATTGTTGTTTTCACCAAAACCTATTCTCAATCTGCTTGGTGTCTTCATCAGCTTCATCAAATCATTGAGTGGCACCAAACTTATTCCCGACATGTTTTGCCCGTATATTACGAACTTCAGCCATCTGATGTTCGTCTTCAAAAGGGTGATTTTGGAAAAACCCTCAAAGCAACTGCACAACAATCATTTTCAGCACAACAACTGAAGCATGGCATGTCCAGGTGGAAACACGCTCTCAGCAAAACTGCAGATTTTTTTGGATGGGATGAGAGTAATTACAGGAGTGATGCTGAAGTAGCGGACAAAATTGTTAAGAGCGTTCTTAATTTAGCGGTCTTGTCTGCTACTAAATTTCCAGTTGGATTACAATCCCGTATGGAAGAAGTGATTCAAATTATAAAAAAAGAATCCACGAAAGTTTGTACGATAGCGATATGTGGAAAGGGAGGGTCAGGTAAAACCACACTTGCTAAAGCCATTTATAATCAAATTCATGATACATTCACACAGAAATTTTTCATTGAAGATATTGAACAAAAACAACTTTGTAACAATGAGATGGGAAGAAGTTTGATTCCGAAAATAATTTACGGGAAAAGGGTGCTCATTGTACTCGACGATGTGAGGTTTTCTTATTATTTAGAAATGATTGTAAGGTCACATCTCCGTGAAGGAACTGTAATAATCATTACAACAACAAATCAAAACCCACCGCTCATAAGATATCCTTATTCTATTTTTCAGATAAACTTAATGAACCCAAACGAGTCCCTTGAGCTTCTTAGTTGGCACGCATTTAGAGAACCAAAACCAAAAGAGGAATGTCATTTCCTCGCAAAAATGGTTGTTGATTATTGTGGAGGCCTACCACTATCTCTTGAAGTCATTGGATCTTTTTTATATGAAAAGACTAAAGAAGAATGGAATAACGTATTGTCAAGATTAGAACGTGTTCCCCAGCACGAAGTTCTACAGATATTGAAACTGAGTTTCGACGGTTTACCTAATGAAATTGAAAGAAATTTATTCCTTGATATATGTTGTTTCTTTGTCGGTAAAGATAGAGTCTATGTTACAAAGATCCTAAATGGTTGTGGAGTAAACGCTGAAAGTGGAATAAGAATTCTCATAGAACGTAGACTCATAATAGTTAAAAAGAACAACAAGTTTGGATTGCATCCTTTGCTAAGAGAAATGGGAAGAGAAATTATTGGCGAAATTACTTCAGGAAAGGAACCTAAGAAGACCAGTCGACTATGGTTTGATAAGGATGAAGATTATGTACTGTTAGAGCATATTCTATTTTCATCACAGGAAAAAAAAGTCATTCAGAGATTCCCTCCGAAATGGTCTCTAACTATAAGAGATTTCTTCGAACGTGATTATTTAGAGGTAAGAGACGCAATAGGAAGGAGGAAACTCGGTGGACATTGTGAGTACCGCTCTAAGGAACTGGGATGGATTAGGTTGGCAAAGTTTTCTTCAAAAGACCTACCTATTGGATTTCTACATGATGCAATAGCCATTGATTTAAAACACAGTCTTCCTCGACTCGTCTGGAAAAAACCCCAGGTTTTGGCATCACTAAAAGTCCTTAATCTTAGTCACTCCAAGTACTTGACAGAAACCCCTGACTTTTCGAGACTACCAGGTCTTGAACACCTCATTCTCAAAGATTGCCCAAGATTGTGCGAAGTGCACCCATCTATTGGAGGTCTCTGCAATCTTACACTTCTAAATTTGAAGGACTGTACAAAGATAAACAATCTTCCCAGAGAGATATATATGTTGAAATCTTTAAAAACACTCATTCTTTCTGGTTGTTCCGGGATTCACCTAATGGAAAAAGATATAGTGCAAATGGAATCCTTGATAACTCTAATTACTGAAAATACAGTTGTGAAACAAGTTCCTTTTTCAATTGAAAGCTCAAAAAGTATTGGATATTTATCTCTACGAGGATTTGAGGGATTATCACATAATCTTTTTCATTTTATCATTCGGTCTTGGAAGTTGCCATCAATGACCCCCCTATCTTATAATCATTCCTTTTGCATGGATATGGAACTTAATAGTTGGGATGATATTGCGCCATTACGTAGGATCTTTGTCAATCTTCGAAGTGTTTTGTTGCAATGTGAGACCGAGTTTCAACTATCTAAGCAAGTACAAGATATTTTGGTCGAATATGGTGTATATATTACAGAATCAGACACTTCAAAGCAACACTTCAGGTCTTCTTTGATCGGTGTTGGAAGATGCAAAGAATTCTTGGATGCTTTCAGCGATAGCATTTCCGAGGTAATTGCAGGAAGTGAATCTTGTGATGTTTCTCTTCCTGGTGACAATGATCCTAATTGTTTGGCCCATATGGGTGAGGGATATTCTGTTTCTTTCACTGTGCCTCGGAATGGTGACATAAAGGGAATGGCTTTGTGCATAGTTTATTTATCAACCCCTGAAATTGTGGCAACCGAAGGTCTTACAAGTGTCTTAATTGTTAATTATACAAAGTGCACATTGCATATACACAACCATGCCACGATAATTTCCTTTAACGACAAAGATTGGGAGGGTATAATATCAAATTTAGGATCAGGAGACAAGGTTGAGATTTTCGTGATTTTTGGTGATGGATTGGTAGTGAGGAGAACAATTGTGTATCTTATATGTGGTGAATCAAATGACTTAGAAAAGGAGTCTCCGTCAAAGAAAAATTCCCCAATTAGATTTATAAAAAACTTGTAA 2952 0.3747 MEFTSSTSKIPQMYDVLINFNGEDIHRKFVSHLDSVLSAAGLTTFLHHQNAVNDMDIQQPILNLCRVAIVVFTKTYSQSAWCLHQLHQIIEWHQTYSRHVLPVYYELQPSDVRLQKGDFGKTLKATAQQSFSAQQLKHGMSRWKHALSKTADFFGWDESNYRSDAEVADKIVKSVLNLAVLSATKFPVGLQSRMEEVIQIIKKESTKVCTIAICGKGGSGKTTLAKAIYNQIHDTFTQKFFIEDIEQKQLCNNEMGRSLIPKIIYGKRVLIVLDDVRFSYYLEMIVRSHLREGTVIIITTTNQNPPLIRYPYSIFQINLMNPNESLELLSWHAFREPKPKEECHFLAKMVVDYCGGLPLSLEVIGSFLYEKTKEEWNNVLSRLERVPQHEVLQILKLSFDGLPNEIERNLFLDICCFFVGKDRVYVTKILNGCGVNAESGIRILIERRLIIVKKNNKFGLHPLLREMGREIIGEITSGKEPKKTSRLWFDKDEDYVLLEHILFSSQEKKVIQRFPPKWSLTIRDFFERDYLEVRDAIGRRKLGGHCEYRSKELGWIRLAKFSSKDLPIGFLHDAIAIDLKHSLPRLVWKKPQVLASLKVLNLSHSKYLTETPDFSRLPGLEHLILKDCPRLCEVHPSIGGLCNLTLLNLKDCTKINNLPREIYMLKSLKTLILSGCSGIHLMEKDIVQMESLITLITENTVVKQVPFSIESSKSIGYLSLRGFEGLSHNLFHFIIRSWKLPSMTPLSYNHSFCMDMELNSWDDIAPLRRIFVNLRSVLLQCETEFQLSKQVQDILVEYGVYITESDTSKQHFRSSLIGVGRCKEFLDAFSDSISEVIAGSESCDVSLPGDNDPNCLAHMGEGYSVSFTVPRNGDIKGMALCIVYLSTPEIVATEGLTSVLIVNYTKCTLHIHNHATIISFNDKDWEGIISNLGSGDKVEIFVIFGDGLVVRRTIVYLICGESNDLEKESPSKKNSPIRFIKNL 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00509 983 Gene3D - 177 264 IPR027417 -
Viun10g00509 983 Pfam NB-ARC domain 192 388 IPR002182 GO:0043531
Viun10g00509 983 Gene3D Ribonuclease Inhibitor 551 775 IPR032675 -
Viun10g00509 983 SMART till_3 13 153 IPR000157 GO:0007165
Viun10g00509 983 Pfam TIR domain 14 176 IPR000157 GO:0007165
Viun10g00509 983 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 156 IPR035897 -
Viun10g00509 983 ProSiteProfiles TIR domain profile. 12 179 IPR000157 GO:0007165
Viun10g00509 983 PRINTS Disease resistance protein signature 210 225 - -
Viun10g00509 983 PRINTS Disease resistance protein signature 354 368 - -
Viun10g00509 983 PRINTS Disease resistance protein signature 592 608 - -
Viun10g00509 983 SUPERFAMILY L domain-like 552 755 - -
Viun10g00509 983 Gene3D - 320 403 IPR042197 -
Viun10g00509 983 Gene3D - 7 176 IPR035897 -
Viun10g00509 983 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 414 IPR027417 -
Viun10g00509 983 SUPERFAMILY "Winged helix" DNA-binding domain 390 492 IPR036390 -
Viun10g00509 983 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 726 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00509 Viun-Chr10 4548959 4552824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00509 14 757 WRKY Transcription Factor Family AT4G12020 25.790 8.09e-49 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00509 - - vun:114165123 1271.53