Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00508 ATGGAATTCGCCTCTTCAACTTCCAAACTCCCAAAGATGTATGATGTGCTGATTAACTTCAATGGAGAAGACATTCGCAGGAAATTTGTTTCTCATCTCGATTCTGTCCTCTCTGCTGCTGGACTCACCACTTTCCTTCACCACCAGAATTCAGTCAACGACATGGACATCCAACAACCTATTCTCAATCTGTGTCGGGTAGCAATTGTTGTTTTCACCAAAACCTATTCTCAATCTGCTTGGTGTCTTCATCAGCTTCATCAAATCATTGAGTGGCATAAAACTTATTGTCGACATGTTCTGCCCGTATATTATGATATTCAGCCATCTGATGTTCGACTTCAAAAGGGTGATTTTGGAAAAACCCTCAAAGCAACTGCACAACAATCATTTTCAGCACAACAACTGGAGCATGGCATGTCCAGGTGGAACCACGCACTAAGCAAAACTGCAGATTTTTTTGGATGGGATGAGAGCAATTACCGGAGTGATGCTGAACTAGTGGACACAATTGTTAAAAGCATTCTTAATTTACCCGTCTTGTCTGCTACTAAATTTCCAATTGGATTACAACCCCACGTGGAAGATGTGATTCAAATTATAAAAAATAAATCCACCGGGGTTTGTACTGTAGGGATATGTGGAATGGGAGGATCCGGTAAAACCACACTTGCCAAAGCCATCTATAATCAAATTCATGGTACATTCTTAGAGAAAAGTTTTATTGAAGATATTTCAGAAGTTAGTCGAACACGAAAGCAGGCTAATTTACAAGAACGACTTCTTTCGGATCTCCTAAAAACAAAGGTGGAGATACATAGAGTTGAGATGGGAAGAAGTATGATTAGGGAAAATCTTTATGGGAAAAAGGTGCTCATTGTTCTTGACGATGTGAGTGAGTATGGGCCATTGGACCTATGGGAAAGTAGTGCAAGGTTCGGTGAAGGAACTGTAATAATCATTACAACAAGAGATGATCGCCTACTGAGGATACATCAAGTTGATTCTATTTTCCGGATGAATCTAATGAACCCAAACGAGTCCCTTGAGCTTCTTAGTTGGCACGCATTTAGAGAACCAAAACTAAAAGAAGAATACCATTTCCTTGCAGAAAGAGTAGTTGCTTATTGTGGAGGACTACCTCTACTTCTTGAAGTCATTGGAAGCTGTTTGTATGAAAGGACGAAGGAAGAATGGAATAGATTATTGTTGCAATTAGACAACAGTCCCCAGCACGAAGTTTCACAGATATTGAAAATAAGCTACGAAGGTTTACTTAATCAAATGGAAAAAGATTTATTCCTTGATGTATGTTGTTTCTTTATTGGAAAATGCAGATTTTATGTTACCAAGATCCTAAATGGCTGTGGAGTAGACCCTGATAGAGGAATAAGAGTTCTCATAAAGCGTAACCTCGTAAAAGTTAGAAAGAACAACAAATTTGGAATGCATCCTTTGCTACGACAAATGGGAAGAGAAATTAGTCACGAAATTTTAAGTAAGGAACCTGAGAAAATCAGTGGGTTGTGGCTTGATGAGGATGCGGAACATGCACTGTCACGGAATACTCTATTTTCATCACAGCAGACAAAAGTCATTCAAAGATTTTCAAGAAGACTGGTGAATCTTGCTGGAGTTTCTTGGTCCCTTTGTGAGAAACTAAGATGGGTCAGTTTGAAAGGGTTTTTTTCACAATACCTACCTAACGACTTTTATCTGCGTGATGCAATAGTGATTGATTTAAAACACAGTCTTCTTCGACTGGTCTGGAAACAACCCCAGAAACCCCTGACTTTTCGAGACTACCAGCTCTCCAACAACTCATTCTCAAAAATTGCCAAAGTTTGCGTGAAGTACAATCTTACATTACTAAATTTGAAGGGCTGTACAGGTCTAGGCAATCTCCCCAGAGAGATATATATGTTGAAATCTTTAAAAGCTCTCGTTCTTTCTGGTTGTTCCAAAATTATCCTACTGGAGAAAGATATAGTGCAAATGGAATCCTTGATAACCCTAATTTCTGAAAATACAGTTGTGAAACAAGTGCCTTTTTCGATTGCAAGTTCAAAAAGCATTGGATATATATCCTTATGTGGATTAGAGGAACGGTCACATAATCTTTTTCCTTCTATCATTCGGTCTCGGATGTCACCAACAACGAATCCCCTATCTTATATTCATACTTTCAGTGGTATGGAGGATAATAGTTGGGATGATATTGTACCATTTTTTAGCAGCCTTACAATCCTTCGAAGTGTTTTGGTGCAATGTGACCCCGAGTTTCAACTATCTAAGCAACTACAAGCGATACTGGTGGATTATTGTGCAAATATTACAGAATCAAGAATTTCAAAGCATCACTTCAGGTCTTGTTTGGTTGGTGTTGGAAGATACGAAGAATTCTTCAATACTGTCAGTTATGGCATATATGAGGTATTGGCAAGTAGTGGGTCATGTGATGTTTGTCTCCCAGGTGACAATTATCCTTATTGGTCGGCCCATAGCGGTGAGGGACATTCTGTGTCTTTCACTGTGCCTCGGGATTGTGTAATGAAGGGCTTGATTTTATGTGTTGTTTGTTTATCAACTCCCGAAATCATTGAACCTGAACTTACTACCGTCATAATTGTTAATTACACGAGGTGCACATTACAGATACACAACCATGGCACAGTAATTTCCTTTAATGATGAAGATTGGGATCACATAGTATCAAATTTAGGATCTGGAGACAGAGTGGAGATTTTTGTGTCTTCTGCTTATGGATTGGTGGTTAAGGAGACAGCTGTTTATTTGATGTATGGTGAGCCAAAGAAAAATTCCCTCATTAGATCCATAAAGAAAATTATAATGTGA 2856 0.388 MEFASSTSKLPKMYDVLINFNGEDIRRKFVSHLDSVLSAAGLTTFLHHQNSVNDMDIQQPILNLCRVAIVVFTKTYSQSAWCLHQLHQIIEWHKTYCRHVLPVYYDIQPSDVRLQKGDFGKTLKATAQQSFSAQQLEHGMSRWNHALSKTADFFGWDESNYRSDAELVDTIVKSILNLPVLSATKFPIGLQPHVEDVIQIIKNKSTGVCTVGICGMGGSGKTTLAKAIYNQIHGTFLEKSFIEDISEVSRTRKQANLQERLLSDLLKTKVEIHRVEMGRSMIRENLYGKKVLIVLDDVSEYGPLDLWESSARFGEGTVIIITTRDDRLLRIHQVDSIFRMNLMNPNESLELLSWHAFREPKLKEEYHFLAERVVAYCGGLPLLLEVIGSCLYERTKEEWNRLLLQLDNSPQHEVSQILKISYEGLLNQMEKDLFLDVCCFFIGKCRFYVTKILNGCGVDPDRGIRVLIKRNLVKVRKNNKFGMHPLLRQMGREISHEILSKEPEKISGLWLDEDAEHALSRNTLFSSQQTKVIQRFSRRLVNLAGVSWSLCEKLRWVSLKGFFSQYLPNDFYLRDAIVIDLKHSLLRLVWKQPQKPLTFRDYQLSNNSFSKIAKVCVKYNLTLLNLKGCTGLGNLPREIYMLKSLKALVLSGCSKIILLEKDIVQMESLITLISENTVVKQVPFSIASSKSIGYISLCGLEERSHNLFPSIIRSRMSPTTNPLSYIHTFSGMEDNSWDDIVPFFSSLTILRSVLVQCDPEFQLSKQLQAILVDYCANITESRISKHHFRSCLVGVGRYEEFFNTVSYGIYEVLASSGSCDVCLPGDNYPYWSAHSGEGHSVSFTVPRDCVMKGLILCVVCLSTPEIIEPELTTVIIVNYTRCTLQIHNHGTVISFNDEDWDHIVSNLGSGDRVEIFVSSAYGLVVKETAVYLMYGEPKKNSLIRSIKKIIM 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00508 951 Gene3D Ribonuclease Inhibitor 533 698 IPR032675 -
Viun10g00508 951 Gene3D - 343 433 IPR042197 -
Viun10g00508 951 Gene3D - 7 175 IPR035897 -
Viun10g00508 951 Pfam NB-ARC domain 192 426 IPR002182 GO:0043531
Viun10g00508 951 Pfam TIR domain 14 176 IPR000157 GO:0007165
Viun10g00508 951 ProSiteProfiles TIR domain profile. 12 179 IPR000157 GO:0007165
Viun10g00508 951 Gene3D - 176 337 IPR027417 -
Viun10g00508 951 SUPERFAMILY L domain-like 483 780 - -
Viun10g00508 951 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 722 IPR044974 GO:0006952
Viun10g00508 951 SMART till_3 13 153 IPR000157 GO:0007165
Viun10g00508 951 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 156 IPR035897 -
Viun10g00508 951 SMART AAA_5 207 348 IPR003593 GO:0016887
Viun10g00508 951 PRINTS Disease resistance protein signature 285 299 - -
Viun10g00508 951 PRINTS Disease resistance protein signature 210 225 - -
Viun10g00508 951 PRINTS Disease resistance protein signature 640 656 - -
Viun10g00508 951 PRINTS Disease resistance protein signature 377 391 - -
Viun10g00508 951 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 436 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00508 Viun-Chr10 4516947 4521095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00508 12 672 WRKY Transcription Factor Family AT4G12020 25.783 2.66e-51 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00508 - - vun:114165123 1209.51