Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00506 ATGTTCTGCCCGTATATTACGAAATTCAGCCATCTGATGTTCGTCTTCAAAAGGGTGATTTTGGAAAAACCCTCAAAGCAACTGCACAAAAATCATTTTCAGCACAACAAATGGAGCATGGCATGTCCAGGTGGAACCACGCACTCAGCAAAACTGCAGATTTTTTTGGATGGGATGAGAGCAATTACAGGGATATGTGGAATGGAAGGATCCGGTAAAACCACACTTGCCAAAGCCATCTATAATCAAATTCATGGTACATTTTTAAAGAAAAGTTTTATTGAAGATATTTCAGAAGTTAGTCGAACAGGAAAGCATGCTAATTTACACGAACGACTTCTTTCAGATCTCCTAAAAACAAAGCTGGAGATACATAAAGTTGAGATGGGAAGACGTATGATTGGGGAAAGACTTTATGGGAAAAAGGTGCTTATTGTACTTGACGATGTGAATGAGTATGGGCCATTGGACCTATGGGAAAGTAGTGCATGGTTCGGTGAAGGAACTGTAATAATCATTACAACAACAGATGCACGCCTACTGAGGATATATCAAGTTGATTATATTTTTCAGATGAATGTAATGAACCCAAACAAGTCCCTTGAGCTTTTTAGTTGGCACGCATTTAGAGAAGCAAAACCAAAAAAGGAATACCATTTCCTTGCAAGAAGAGTAGTTGCTTATTGTGGAGGACTACCTCTACTTCTTGAAGTCATCGGAAGTTGTTTGTATGAAAGGACGAAGGAAGAATGGAATAGATTATTGTTGCAATTAGACAACAGTGCCCAGCACGAAGTTGACCAGATATTGAAAATAAGCTACGAAGATTTACTTAATCAAATGGAAAAAGATTTATTCCTTGATGTATGTTGTTTCTTTATTGGTAAATGCAAATTTTATGTTACCAAGATCCTAAATGACTGTGGAGTAGACCCTGATAGTGGAATAAGAGTTCTCATAAAGCGTAACCTCGTAAAAATTAGAAAGAACAACAAAGTTGGAATGCATCCTTTGCTACGACAAATGGGAAGAGAAATTAGTCACGAAATTTTAAGAAAGGAACCTGAGAAAATCAGTGGGTTGTGGCTTGATGAGGATATGGAACATGCACTGTCACGGAATAGTCAGACAAATGTCATTCAAAGATTTTCGAGAAGACTGGTGAATCTTGCCGGATTTTCTTGGTCCCTTTGTGAGAAACTAAGATGGGTCAGTTTGAAAGGGTTTTCTTCACAATACCTACCTAACGACTTTTATTTGCGTGATGCAATAGGGATTGATTTAAAACACAGTCTTCTTCGACTGGTCTGGAAAGAATCCCAGGTCTTGGCGCGGCTAAAAGTCCTTAATCTTAGTCATTCCATTTACTTGACAGAAACCCCTGACTTTTCAAGACTACCTGCTCTCGAACAACTCATTCTCAAAAATTGCCAAAGTTTGCGTCAAGTACACCAGTCTATTGGATTTCTCTACAATCTTACATTACTAAATTTGAAGGACTGTACAGGCCTAACCAATCTCCCCAGAGAGATATATATGTTGAAATCTTTAAAAGCTCTCGTTCTTTCTGGTTGTTCCAAAATTGTCCTACTCGAGAAAGATATAGTGCAAATGGAATCCTTGATAACCCTAATTTCTGAAAATACAGTTTTGAAACAAGTTCCTTTTTCGATTGCAAGTTCAAAAAGCATTGGATATATATCCTTATGTGGATTAGAGGAACGGTCAAATAATCTTTTTCCTTCTATCATTCGGTCTCGGATGTCACCAACAACGAATCCCCTATCCTATATTCATACTTTCAGTGATACGGAGGACAATAGTTGGGATGATGTTGTACCATTTTTTAGCAGTCTTGCAATTCTTCGAAGTGTTTTGGTGCAATGTGACCCCGAGTTTCAACTATCTGTACAACTAAAAGCGATACTGATGGATTATTGTGTAAATATTACAAAATCAAGAATTTCAAAGCATCACTTCAGGTCTTGTTTGATCGGTGTTGGCAGATACGAAGAATTCTTCAATACTGTCAGCGATGGCATATCTGAGGTATTGGCAAGTAGTGGGTCATGTGATGTTTGTCTCCCAGGTGACAATTATCCTTATTGGTCGGCCCATAGGGGTGAGGGACATTCTGTGTCTTTCACTGTGCCTCGGGATTGTGTGATGAAGGGCTTGATTTTATGTGTTGTTTGTTTATCAACTCCCGAAATCATTGAACCTGAACTTACTACTGTCTTAATTGTAAATTACACGAGGTGCACATTACAGATACACAACCATGGCACAGTAATTTCCTTTAATGACGAAGATTGGGATCACATAGTATCAAATTTAGGATCTGGAGACAGAGTGGAGATTTTTGTGTCTTCTGCTTATGGATTGGTGGTTAAGGAGACAGCTGTTTATTTGATGTATGGTGAGCCAAAGAAAAATTCCCTCATTAGATCCATAAAGAAAATTATAATGTGA 2472 0.3815 MFCPYITKFSHLMFVFKRVILEKPSKQLHKNHFQHNKWSMACPGGTTHSAKLQIFLDGMRAITGICGMEGSGKTTLAKAIYNQIHGTFLKKSFIEDISEVSRTGKHANLHERLLSDLLKTKLEIHKVEMGRRMIGERLYGKKVLIVLDDVNEYGPLDLWESSAWFGEGTVIIITTTDARLLRIYQVDYIFQMNVMNPNKSLELFSWHAFREAKPKKEYHFLARRVVAYCGGLPLLLEVIGSCLYERTKEEWNRLLLQLDNSAQHEVDQILKISYEDLLNQMEKDLFLDVCCFFIGKCKFYVTKILNDCGVDPDSGIRVLIKRNLVKIRKNNKVGMHPLLRQMGREISHEILRKEPEKISGLWLDEDMEHALSRNSQTNVIQRFSRRLVNLAGFSWSLCEKLRWVSLKGFSSQYLPNDFYLRDAIGIDLKHSLLRLVWKESQVLARLKVLNLSHSIYLTETPDFSRLPALEQLILKNCQSLRQVHQSIGFLYNLTLLNLKDCTGLTNLPREIYMLKSLKALVLSGCSKIVLLEKDIVQMESLITLISENTVLKQVPFSIASSKSIGYISLCGLEERSNNLFPSIIRSRMSPTTNPLSYIHTFSDTEDNSWDDVVPFFSSLAILRSVLVQCDPEFQLSVQLKAILMDYCVNITKSRISKHHFRSCLIGVGRYEEFFNTVSDGISEVLASSGSCDVCLPGDNYPYWSAHRGEGHSVSFTVPRDCVMKGLILCVVCLSTPEIIEPELTTVLIVNYTRCTLQIHNHGTVISFNDEDWDHIVSNLGSGDRVEIFVSSAYGLVVKETAVYLMYGEPKKNSLIRSIKKIIM 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00506 823 SMART AAA_5 59 196 IPR003593 GO:0016887
Viun10g00506 823 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 288 IPR027417 -
Viun10g00506 823 SUPERFAMILY "Winged helix" DNA-binding domain 265 369 IPR036390 -
Viun10g00506 823 Pfam NB-ARC domain 61 279 IPR002182 GO:0043531
Viun10g00506 823 PRINTS Disease resistance protein signature 512 528 - -
Viun10g00506 823 PRINTS Disease resistance protein signature 62 77 - -
Viun10g00506 823 PRINTS Disease resistance protein signature 229 243 - -
Viun10g00506 823 PRINTS Disease resistance protein signature 137 151 - -
Viun10g00506 823 Gene3D Ribonuclease Inhibitor 370 562 IPR032675 -
Viun10g00506 823 Gene3D - 195 285 IPR042197 -
Viun10g00506 823 Gene3D - 47 189 IPR027417 -
Viun10g00506 823 SUPERFAMILY L domain-like 369 650 - -
Viun10g00506 823 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 51 551 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00506 Viun-Chr10 4506164 4510531 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00506 64 547 WRKY Transcription Factor Family AT5G45050 29.541 3.36e-51 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00506 - - vun:114165123 950.273