Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00503 ATGAAAATGTCTTCTGTAGTTTCCAGCAAAGCATTCCTTGAGGCCTCATTTGATTGGAATTGGAAGTTACCAAGAATTCTTCAATACATATCAGAGATGTATGATTTGCTGATTAACTTCAATGGAGAAGACATCCACAGGAAATTTGTTTCTCATCTCGATTCTGTCCTCTCTGCTGCTGGACTCACCACTTTCCTTCACCACCAGAATGCAGTCAACGACATGGACATCCAACAGCCTATTCTCAATCTTTGTCGGGTAGCAATTGTTGTTTTCACCAAAACCTATTCTGAATCTGCTTGGTGTCTTCATCAGCTTCAACAAATCATTGAGTGGCACAAAACTTATTCCCGACATGTTCTGCCCGTATATTACGAAATTCAGCCATCTGATGTTCGTCTTCAAAAGGGTGATTTTGGAAAAACCCTCAAAGCAACTGCACAAAAATCATTTTCAGCACAACAAATGGAGCATGGCATGTCCAGGTGGAACCACGCACTCAGCAAAACTGCAGATTTTTTTGGATGGGATGAGAGCAATTACAGGAGTGATGCTGAACTAGTGGACACAATTGTTAAAAGCATTCTTAATTTACCAGTCTTGTCTGCTACTAAATTTCCAATTGGATTACAACCCCACGTGGAAGATGTGATTCAAGTTATAAAAAATAAATCCACCGGGGTTTGTACTGTAGGGATATGTGGAATGGAAGGATCCGGTAAAACCACACTTGCCAAAGCCATCTATAATCAAATTCATGATCTCCTAAAAACAAAGCTGGAGATACATAAAGTTGAGATGGGAAGACGTATGATTGGGGAAAGACTTTATGGGAAAAAGGTGCTTATTGTACTTGACGATGTGAATGAGTATGGGCCATTGGACCTATGGGAAAGTAGTGCATGGTTCGGTGAAGGAACTGTAATAATCATTACAACAACAGATGCACGCCTACTGAGGATATATCAAGTTGATTATATTTTTCAGATGAATGTAATGAACCCAAACAAGTCCCTTGAGCTTTTTAGTTGGCACGCATTTAGAGAAGCAAAACCAAAAAAGGAATACCATTTCCTTGCAAGAAGAGTAGTTGCTTATTGTGGAGGACTACCTCTACTTCTTGAAGTCATCGGAAGTTGTTTGTATGAAAGGACGAAGGAAGAATGGAATAGATTATTGTTGCAATTAGACAACAGTGCCCAGCACGAAGTTGACCAGATATTGAAAATAAGCTACGAAGATTTACTTAATCAAATGGAAAAAGATTTATTCCTTGATGTATGTTGTTTCTTTATTGGTAAATGCAAATTTTATGTTACCAAGATCCTAAATGACTGTGGAGTAGACCCTGATAGTGGAATAAGAGTTCTCATAAAGCGTAACCTCGTAAAAATTAGAAAGAACAACAAAGTTGGAATGCATCCTTTGCTACGACAAATGGGAAGAGAAATTAGTCACGAAATTTTAAGAAAGGAACCTGAGAAAATCAGTGGGTTGTGGCTTGATGAGGATATGGAACATGCACTGTCACGGAATAGTCAGACAAATGTCATTCAAAGATTTTCGAGAAGACTGGTGAATCTTGCCGGATTTTCTTGGTCCCTTTGTGAGAAACTAAGATGGGTCAGTTTGAAAGGGTTTTCTTCACAATACCTACCTAACGACTTTTATTTGCGTGATGCAATAGGGATTGATTTAAAACACAGTCTTCTTCGACTGGTCTGGAAAGAATCCCAGGTCTTGGCGCGGCTAAAAGTCCTTAATCTTAGTCATTCCATTTACTTGACAGAAACCCCTGACTTTTCAAGACTACCTGCTCTCGAACAACTCATTCTCAAAAATTGCCAAAGTTTGCGTCAAGTACACCAGTCTATTGGATTTCTCTACAATCTTACATTACTAAATTTGAAGGACTGTACAGGCCTAACCAATCTCCCCAGAGAGATATATATGTTGAAATCTTTAAAAGCTCTCGTTCTTTCTGGTTGTTCCAAAATTGTCCTACTCGAGAAAGATATAGTGCAAATGGAATCCTTGATAACCCTAATTTCTGAAAATACAGTTTTGAAACAAGTTCCTTTTTCGATTGCAAGTTCAAAAAGCATTGGATATATATCCTTATGTGGATTAGAGGAACGGTCAAATAATCTTTTTCCTTCTATCATTCGGTCTCGGATGTCACCAACAACGAATCCCCTATCCTATATTCATACTTTCAGTGATACGGAGGACAATAGTTGGGATGATGTTGTACCATTTTTTAGCAGTCTTGCAATTCTTCGAAGTGTTTTGGTGCAATGTGACCCCGAGTTTCAACTATCTGTACAACTAAAAGCGATACTGATGGATTATTGTGTAAATATTACAAAATCAAGAATTTCAAAGCATCACTTCAGGTCTTGTTTGATCGGTGTTGGCAGATACGAAGAATTCTTCAATACTGTCAGCGATGGCATATCTGAGGTATTGGCAAGTAGTGGGTCATGTGATGTTTGTCTCCCAGGTGACAATTATCCTTATTGGTCGGCCCATAGGGGTGAGGGACATTCTGTGTCTTTCACTGTGCCTCGGGATTGTGTGATGAAGGGCTTGATTTTATGTGTTGTTTGTTTATCAACTCCCGAAATCATTGAACCTGAACTTACTACTGTCTTAATTGTAAATTACACGAGGTGCACATTACAGATACACAACCATGGCACAGTAATTTCCTTTAATGACGAAGATTGGGATCACATAGTATCAAATTTAGGATCTGGAGACAGAGTGGAGATTTTTGTGTCTTCTGCTTATGGATTGGTGGTTAAGGAGACAGCTGTTTATTTGATGTATGGTGAGCCAAAGAAAAATTCCCTCATTAGATCCATAAAGAAAATTATAATGTGA 2886 0.386 MKMSSVVSSKAFLEASFDWNWKLPRILQYISEMYDLLINFNGEDIHRKFVSHLDSVLSAAGLTTFLHHQNAVNDMDIQQPILNLCRVAIVVFTKTYSESAWCLHQLQQIIEWHKTYSRHVLPVYYEIQPSDVRLQKGDFGKTLKATAQKSFSAQQMEHGMSRWNHALSKTADFFGWDESNYRSDAELVDTIVKSILNLPVLSATKFPIGLQPHVEDVIQVIKNKSTGVCTVGICGMEGSGKTTLAKAIYNQIHDLLKTKLEIHKVEMGRRMIGERLYGKKVLIVLDDVNEYGPLDLWESSAWFGEGTVIIITTTDARLLRIYQVDYIFQMNVMNPNKSLELFSWHAFREAKPKKEYHFLARRVVAYCGGLPLLLEVIGSCLYERTKEEWNRLLLQLDNSAQHEVDQILKISYEDLLNQMEKDLFLDVCCFFIGKCKFYVTKILNDCGVDPDSGIRVLIKRNLVKIRKNNKVGMHPLLRQMGREISHEILRKEPEKISGLWLDEDMEHALSRNSQTNVIQRFSRRLVNLAGFSWSLCEKLRWVSLKGFSSQYLPNDFYLRDAIGIDLKHSLLRLVWKESQVLARLKVLNLSHSIYLTETPDFSRLPALEQLILKNCQSLRQVHQSIGFLYNLTLLNLKDCTGLTNLPREIYMLKSLKALVLSGCSKIVLLEKDIVQMESLITLISENTVLKQVPFSIASSKSIGYISLCGLEERSNNLFPSIIRSRMSPTTNPLSYIHTFSDTEDNSWDDVVPFFSSLAILRSVLVQCDPEFQLSVQLKAILMDYCVNITKSRISKHHFRSCLIGVGRYEEFFNTVSDGISEVLASSGSCDVCLPGDNYPYWSAHRGEGHSVSFTVPRDCVMKGLILCVVCLSTPEIIEPELTTVLIVNYTRCTLQIHNHGTVISFNDEDWDHIVSNLGSGDRVEIFVSSAYGLVVKETAVYLMYGEPKKNSLIRSIKKIIM 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00503 961 Gene3D - 31 199 IPR035897 -
Viun10g00503 961 ProSiteProfiles TIR domain profile. 32 199 IPR000157 GO:0007165
Viun10g00503 961 SUPERFAMILY L domain-like 507 788 - -
Viun10g00503 961 Gene3D Ribonuclease Inhibitor 508 705 IPR032675 -
Viun10g00503 961 Gene3D - 257 327 IPR027417 -
Viun10g00503 961 SMART till_3 33 173 IPR000157 GO:0007165
Viun10g00503 961 Pfam NB-ARC domain 264 417 IPR002182 GO:0043531
Viun10g00503 961 Gene3D - 200 256 IPR027417 -
Viun10g00503 961 SUPERFAMILY "Winged helix" DNA-binding domain 403 507 IPR036390 -
Viun10g00503 961 PRINTS Disease resistance protein signature 367 381 - -
Viun10g00503 961 PRINTS Disease resistance protein signature 650 666 - -
Viun10g00503 961 PRINTS Disease resistance protein signature 230 245 - -
Viun10g00503 961 SUPERFAMILY Toll/Interleukin receptor TIR domain 31 176 IPR035897 -
Viun10g00503 961 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 426 IPR027417 -
Viun10g00503 961 Pfam TIR domain 34 196 IPR000157 GO:0007165
Viun10g00503 961 Gene3D - 333 423 IPR042197 -
Viun10g00503 961 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34 689 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00503 Viun-Chr10 4506164 4516938 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00503 581 697 WRKY Transcription Factor Family AT4G12020 34.188 1.59e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00503 - - vun:114165123 1228