Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00502 ATGAAAATGTCTTCTGTAGTTTCCAGCAAAGCATTCCTTGAGGCCTCATTTGATTGGAATTGGAAGTTACCAAGAATTCTTCAATACATATCAGAGATGTATGATTTGCTGATTAACTTCAATGGAGAAGACATCCACAGGAAATTTGTTTCTCATCTCGATTCTGTCCTCTCTGCTGCTGGACTCACCACTTTCCTTCACCACCAGAATGCAGTCAACGACATGGACATCCAACAGCCTATTCTCAATCTTTGTCGGGTAGCAATTGTTGTTTTCACCAAAACCTATTCTGAATCTGCTTGGTGTCTTCATCAGCTTCAACAAATCATTGAGTGGCACAAAACTTATTCCCGACATGTTCTGCCCGTATATTACGAAATTCAGCCATCTGATGTTCGTCTTCAAAAGGGTGATTTTGGAAAAACCCTCAAAGCAACTGCACAAAAATCATTTTCAGCACAACAAATGGAGCATGGCATGTCCAGGTGGAACCACGCACTCAGCAAAACTGCAGATTTTTTTGGATGGGATGAGAGCAATTACAGGAGTGATGCTGAACTAGTGGACACAATTGTTAAAAGCATTCTTAATTTACCAGTCTTGTCTGCTACTAAATTTCCAATTGGATTACAACCCCACGTGGAAGATGTGATTCAAGTTATAAAAAATAAATCCACCGGGGTTTGTACTGTAGGGATATGTGGAATGGAAGGATCCGGTAAAACCACACTTGCCAAAGCCATCTATAATCAAATTCATGGTACATTTTTAAAGAAAAGTTTTATTGAAGATATTTCAGAAGTTAGTCGAACAGGAAAGCATGCTAATTTACACGAACGACTTCTTTCAGATCTCCTAAAAACAAAGCTGGAGATACATAAAGTTGAGATGGGAAGACGTATGATTGGGGAAAGACTTTATGGGAAAAAGGTGCTTATTGTACTTGACGATGTGAATGAGTATGGGCCATTGGACCTATGGGAAAGTAGTGCATGGTTCGGTGAAGGAACTGTAATAATCATTACAACAACAGATGCACGCCTACTGAGGATATATCAAGTTGATTATATTTTTCAGATGAATGTAATGAACCCAAACAAGTCCCTTGAGCTTTTTAGTTGGCACGCATTTAGAGAAGCAAAACCAAAAAAGGAATACCATTTCCTTGCAAGAAGAGTAGTTGCTTATTGTGGAGGACTACCTCTACTTCTTGAAGTCATCGGAAGTTGTTTGTATGAAAGGACGAAGGAAGAATGGAATAGATTATTGTTGCAATTAGACAACAGTGCCCAGCACGAAGTTGACCAGATATTGAAAATAAGCTACGAAGATTTACTTAATCAAATGGAAAAAGATTTATTCCTTGATGTATGTTGTTTCTTTATTGGTAAATGCAAATTTTATGTTACCAAGATCCTAAATGACTGTGGAGTAGACCCTGATAGTGGAATAAGAGTTCTCATAAAGCGTAACCTCGTAAAAATTAGAAAGAACAACAAAGTTGGAATGCATCCTTTGCTACGACAAATGGGAAGAGAAATTAGTCACGAAATTTTAAGAAAGGAACCTGAGAAAATCAGTGGGTTGTGGCTTGATGAGGATATGGAACATGCACTGTCACGGAATAGTCAGACAAATGTCATTCAAAGATTTTCGAGAAGACTGGTGAATCTTGCCGGATTTTCTTGGTCCCTTTGTGAGAAACTAAGATGGGTCAGTTTGAAAGGGTTTTCTTCACAATACCTACCTAACGACTTTTATTTGCGTGATGCAATAGGGATTGATTTAAAACACAGTCTTCTTCGACTGGTCTGGAAAGAATCCCAGGTCTTGGCGCGGCTAAAAGTCCTTAATCTTAGTCATTCCATTTACTTGACAGAAACCCCTGACTTTTCAAGACTACCTGCTCTCGAACAACTCATTCTCAAAAATTGCCAAAGTTTGCGTCAAGTACACCAGTCTATTGGATTTCTCTACAATCTTACATTACTAAATTTGAAGGACTGTACAGGCCTAACCAATCTCCCCAGAGAGATATATATGTTGAAATCTTTAAAAGCTCTCGTTCTTTCTGGTTGTTCCAAAATTGTCCTACTCGAGAAAGATATAGTGCAAATGGAATCCTTGATAACCCTAATTTCTGAAAATACAGTTTTGAAACAAGTTCCTTTTTCGATTGCAAGTTCAAAAAGCATTGGATATATATCCTTATGTGGATTAGAGGAACGGTCAAATAATCTTTTTCCTTCTATCATTCGGTCTCGGATGTCACCAACAACGAATCCCCTATCCTATATTCATACTTTCAGTGATACGGAGGACAATAGTTGGGATGATGTTGTACCATTTTTTAGCAGTCTTGCAATTCTTCGAAGTGTTTTGGTGCAATGTGACCCCGAGTTTCAACTATCTGTACAACTAAAAGCGATACTGATGGATTATTGTGTAAATATTACAAAATCAAGAATTTCAAAGCATCACTTCAGGTCTTGTTTGATCGGTGTTGGCAGATACGAAGAATTCTTCAATACTGTCAGCGATGGCATATCTGAGTTTCCAGCAAAGCATTCCTTGAGGCCTCATTTGATTGGAATTGGAAGTTACCAAGAATTCTTCAATACATATCAGAGGTTCTTCCTGTCAATTTTCTTTTGA 2655 0.3812 MKMSSVVSSKAFLEASFDWNWKLPRILQYISEMYDLLINFNGEDIHRKFVSHLDSVLSAAGLTTFLHHQNAVNDMDIQQPILNLCRVAIVVFTKTYSESAWCLHQLQQIIEWHKTYSRHVLPVYYEIQPSDVRLQKGDFGKTLKATAQKSFSAQQMEHGMSRWNHALSKTADFFGWDESNYRSDAELVDTIVKSILNLPVLSATKFPIGLQPHVEDVIQVIKNKSTGVCTVGICGMEGSGKTTLAKAIYNQIHGTFLKKSFIEDISEVSRTGKHANLHERLLSDLLKTKLEIHKVEMGRRMIGERLYGKKVLIVLDDVNEYGPLDLWESSAWFGEGTVIIITTTDARLLRIYQVDYIFQMNVMNPNKSLELFSWHAFREAKPKKEYHFLARRVVAYCGGLPLLLEVIGSCLYERTKEEWNRLLLQLDNSAQHEVDQILKISYEDLLNQMEKDLFLDVCCFFIGKCKFYVTKILNDCGVDPDSGIRVLIKRNLVKIRKNNKVGMHPLLRQMGREISHEILRKEPEKISGLWLDEDMEHALSRNSQTNVIQRFSRRLVNLAGFSWSLCEKLRWVSLKGFSSQYLPNDFYLRDAIGIDLKHSLLRLVWKESQVLARLKVLNLSHSIYLTETPDFSRLPALEQLILKNCQSLRQVHQSIGFLYNLTLLNLKDCTGLTNLPREIYMLKSLKALVLSGCSKIVLLEKDIVQMESLITLISENTVLKQVPFSIASSKSIGYISLCGLEERSNNLFPSIIRSRMSPTTNPLSYIHTFSDTEDNSWDDVVPFFSSLAILRSVLVQCDPEFQLSVQLKAILMDYCVNITKSRISKHHFRSCLIGVGRYEEFFNTVSDGISEFPAKHSLRPHLIGIGSYQEFFNTYQRFFLSIFF 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00502 884 ProSiteProfiles TIR domain profile. 32 199 IPR000157 GO:0007165
Viun10g00502 884 Pfam NB-ARC domain 212 447 IPR002182 GO:0043531
Viun10g00502 884 SUPERFAMILY Toll/Interleukin receptor TIR domain 31 176 IPR035897 -
Viun10g00502 884 Gene3D - 196 357 IPR027417 -
Viun10g00502 884 Gene3D - 363 453 IPR042197 -
Viun10g00502 884 Gene3D - 30 195 IPR035897 -
Viun10g00502 884 PRINTS Disease resistance protein signature 305 319 - -
Viun10g00502 884 PRINTS Disease resistance protein signature 397 411 - -
Viun10g00502 884 PRINTS Disease resistance protein signature 680 696 - -
Viun10g00502 884 PRINTS Disease resistance protein signature 230 245 - -
Viun10g00502 884 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34 718 IPR044974 GO:0006952
Viun10g00502 884 SMART till_3 33 173 IPR000157 GO:0007165
Viun10g00502 884 SUPERFAMILY "Winged helix" DNA-binding domain 433 537 IPR036390 -
Viun10g00502 884 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 456 IPR027417 -
Viun10g00502 884 SUPERFAMILY L domain-like 537 818 - -
Viun10g00502 884 Pfam TIR domain 34 196 IPR000157 GO:0007165
Viun10g00502 884 Gene3D Ribonuclease Inhibitor 538 731 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00502 Viun-Chr10 4505536 4516938 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00502 611 727 WRKY Transcription Factor Family AT4G12020 34.188 1.60e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00502 - - vun:114165123 1100.89