Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00493 ATGGAATTCGCCTCTTCAACTTCCAAACTTCCACAGATGTATGATTTGCTGATTAACTTCAATGGAGAAGACATCCACAGGAAATTTGTTTCTCATCTCGATTCTGTCCTCTCTGCTGCTGGACTCACCACTTTCCTTCACCACCAGAATGCAGTCAACGACATGGACATCCAACAGCCTATTCTCAATCTTTGTCGGGTAGCAATTGTTGTTTTCACCAAAACCTATTCTGAATCTGCTTGGTGTCTTCATCAGCTTCAACAAATCATTGAGTGGCACAAAACTTATTCCCGACATGTTCTGCCCGTATATTACGAAATTCAGCCATCTGATGTTCGTCTTCAAAAGGGTGATTTTGGAAAAACCCTCAAAGCAACTGCACAAAAATCATTTTCAGCACAACAAATGGAGCATGGCATGTCCAGGTGGAACCACGCACTCAGCAAAACTGCAGATTTTTTTGGATGGGATGAGAGCAATTACAGGAGTGATGCTGAACTAGTGGACACAATTGTTAAAAGCATTCTTAATTTACCAGTCTTGTCTGCTACTAAATTTCCAATTGGATTACAACCCCACGTGGAAGATGTGATTCAAGTTATAAAAAATAAATCCACCGGGGTTTGTACTGTAGGGATATGTGGAATGGAAGGATCCGGTAAAACCACACTTGCCAAAGCCATCTATAATCAAATTCATGGTACATTTTTAAAGAAAAGTTTTATTGAAGATATTTCAGAAGTTAGTCGAACAGGAAAGCATGCTAATTTACACGAACGACTTCTTTCAGATCTCCTAAAAACAAAGCTGGAGATACATAAAGTTGAGATGGGAAGACGTATGATTGGGGAAAGACTTTATGGGAAAAAGGTGCTTATTGTACTTGACGATGTGAATGAGTATGGGCCATTGGACCTATGGGAAAGTAGTGCATGGTTCGGTGAAGGAACTGTAATAATCATTACAACAACAGATGCACGCCTACTGAGGATATATCAAGTTGATTATATTTTTCAGATGAATGTAATGAACCCAAACAAGTCCCTTGAGCTTTTTAGTTGGCACGCATTTAGAGAAGCAAAACCAAAAAAGGAATACCATTTCCTTGCAAGAAGAGTAGTTGCTTATTGTGGAGGACTACCTCTACTTCTTGAAGTCATCGGAAGTTGTTTGTATGAAAGGACGAAGGAAGAATGGAATAGATTATTGTTGCAATTAGACAACAGTGCCCAGCACGAAGTTGACCAGATATTGAAAATAAGCTACGAAGATTTACTTAATCAAATGGAAAAAGATTTATTCCTTGATGTATGTTGTTTCTTTATTGGTAAATGCAAATTTTATGTTACCAAGATCCTAAATGACTGTGGAGTAGACCCTGATAGTGGAATAAGAGTTCTCATAAAGCGTAACCTCGTAAAAATTAGAAAGAACAACAAAGTTGGAATGCATCCTTTGCTACGACAAATGGGAAGAGAAATTAGTCACGAAATTTTAAGAAAGGAACCTGAGAAAATCAGTGGGTTGTGGCTTGATGAGGATATGGAACATGCACTGTCACGGAATAGTACAAATGTCATTCAAAGATTTTCGAGAAGACTGGTGAATCTTGCCGGATTTTCTTGGTCCCTTTGTGAGAAACTAAGATGGGTCAGTTTGAAAGGGTTTTCTTCACAATACCTACCTAACGACTTTTATTTGCGTGATGCAATAGGGATTGATTTAAAACACAGTCTTCTTCGACTGGTCTGGAAAGAATCCCAGGTCTTGGCGCGGCTAAAAGTCCTTAATCTTAGTCATTCCATTTACTTGACAGAAACCCCTGACTTTTCAAGACTACCTGCTCTCGAACAACTCATTCTCAAAAATTGCCAAAGTTTGCGTCAAGTACACCAGTCTATTGGATTTCTCTACAATCTTACATTACTAAATTTGAAGGACTGTACAGGCCTAACCAATCTCCCCAGAGAGATATATATGTTGAAATCTTTAAAAGCTCTCGTTCTTTCTGGTTGTTCCAAAATTGTCCTACTCGAGAAAGATATAGTGCAAATGGAATCCTTGATAACCCTAATTTCTGAAAATACAGTTTTGAAACAAGTTCCTTTTTCGATTGCAAGTTCAAAAAGCATTGGATATATATCCTTATGTGGATTAGAGGAACGGTCAAATAATCTTTTTCCTTCTATCATTCGGTCTCGGATGTCACCAACAACGAATCCCCTATCCTATATTCATACTTTCAGTGATACGGAGGACAATAGTTGGGATGATGTTGTACCATTTTTTAGCAGTCTTGCAATTCTTCGAAGTGTTTTGGTGCAATGTGACCCCGAGTTTCAACTATCTGTACAACTAAAAGCGATACTGATGGATTATTGTGTAAATATTACAAAATCAAGAATTTCAAAGCATCACTTCAGGTCTTGTTTGATCGGTGTTGGCAGATACGAAGAATTCTTCAATACTGTCAGCGATGGCATATCTGAGGTATTGGCAAGTAGTGGGTCATGTGATGTTTGTCTCCCAGGTGACAATTATCCTTATTGGTCGGCCCATAGGGGTGAGGGACATTCTGTGTCTTTCACTGTGCCTCGGGATTGTGTGATGAAGGGCTTGATTTTATGTGTTGTTTGTTTATCAACTCCCGAAATCATTGAACCTGAACTTACTACTGTCTTAATTGTAAATTACACGAGGTGCACATTACAGATACACAACCATGGCACAGTAATTTCCTTTAATGACGAAGATTGGGATCACATAGTATCAAATTTAGGATCTGGAGACAGAGTGGAGATTTTTGTGTCTTCTGCTTATGGATTGGTGGTTAAGGAGACAGCTGTTTATTTGATGTATGGTGAGCCAAAGAAAAATTCCCTCATTAGATCCATAAAGAAAATTATAATGTGA 2913 0.3848 MEFASSTSKLPQMYDLLINFNGEDIHRKFVSHLDSVLSAAGLTTFLHHQNAVNDMDIQQPILNLCRVAIVVFTKTYSESAWCLHQLQQIIEWHKTYSRHVLPVYYEIQPSDVRLQKGDFGKTLKATAQKSFSAQQMEHGMSRWNHALSKTADFFGWDESNYRSDAELVDTIVKSILNLPVLSATKFPIGLQPHVEDVIQVIKNKSTGVCTVGICGMEGSGKTTLAKAIYNQIHGTFLKKSFIEDISEVSRTGKHANLHERLLSDLLKTKLEIHKVEMGRRMIGERLYGKKVLIVLDDVNEYGPLDLWESSAWFGEGTVIIITTTDARLLRIYQVDYIFQMNVMNPNKSLELFSWHAFREAKPKKEYHFLARRVVAYCGGLPLLLEVIGSCLYERTKEEWNRLLLQLDNSAQHEVDQILKISYEDLLNQMEKDLFLDVCCFFIGKCKFYVTKILNDCGVDPDSGIRVLIKRNLVKIRKNNKVGMHPLLRQMGREISHEILRKEPEKISGLWLDEDMEHALSRNSTNVIQRFSRRLVNLAGFSWSLCEKLRWVSLKGFSSQYLPNDFYLRDAIGIDLKHSLLRLVWKESQVLARLKVLNLSHSIYLTETPDFSRLPALEQLILKNCQSLRQVHQSIGFLYNLTLLNLKDCTGLTNLPREIYMLKSLKALVLSGCSKIVLLEKDIVQMESLITLISENTVLKQVPFSIASSKSIGYISLCGLEERSNNLFPSIIRSRMSPTTNPLSYIHTFSDTEDNSWDDVVPFFSSLAILRSVLVQCDPEFQLSVQLKAILMDYCVNITKSRISKHHFRSCLIGVGRYEEFFNTVSDGISEVLASSGSCDVCLPGDNYPYWSAHRGEGHSVSFTVPRDCVMKGLILCVVCLSTPEIIEPELTTVLIVNYTRCTLQIHNHGTVISFNDEDWDHIVSNLGSGDRVEIFVSSAYGLVVKETAVYLMYGEPKKNSLIRSIKKIIM 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00493 970 Pfam TIR domain 14 176 IPR000157 GO:0007165
Viun10g00493 970 Gene3D Ribonuclease Inhibitor 518 710 IPR032675 -
Viun10g00493 970 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 698 IPR044974 GO:0006952
Viun10g00493 970 Gene3D - 7 175 IPR035897 -
Viun10g00493 970 SUPERFAMILY L domain-like 528 797 - -
Viun10g00493 970 SMART till_3 13 153 IPR000157 GO:0007165
Viun10g00493 970 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 156 IPR035897 -
Viun10g00493 970 ProSiteProfiles TIR domain profile. 12 179 IPR000157 GO:0007165
Viun10g00493 970 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 436 IPR027417 -
Viun10g00493 970 Gene3D - 343 433 IPR042197 -
Viun10g00493 970 SUPERFAMILY "Winged helix" DNA-binding domain 413 517 IPR036390 -
Viun10g00493 970 Gene3D - 176 337 IPR027417 -
Viun10g00493 970 PRINTS Disease resistance protein signature 210 225 - -
Viun10g00493 970 PRINTS Disease resistance protein signature 659 675 - -
Viun10g00493 970 PRINTS Disease resistance protein signature 377 391 - -
Viun10g00493 970 PRINTS Disease resistance protein signature 285 299 - -
Viun10g00493 970 Pfam NB-ARC domain 192 427 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00493 Viun-Chr10 4455637 4460998 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00493 590 706 WRKY Transcription Factor Family AT4G12020 34.188 1.65e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00493 - - vun:114165123 1283.47