Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00480 ATGGTCTTAACGCGCTTCCACGGCTATAAACAAATATTAATCTTTTGCTACTTTGAATGGTTTTGTGTCTGTAAAGAGATCATCTCTCATGTGTTGCATTATTGCTTTCTCTTCCAACACTTCAGAACGTCACCAGTTTCTTCCATGGAATTCGCCTCTTCAACTTCCAAACTTCCACAGATGTATGATATGCTGATTAACTTCAATGGAGAAGACATCCACAGGAAATTTGTTTCTCATCTCGATTCTGTCCTCTCTGCTGCTGGACTCACCACTCTCCTTCACCACCAGAATGCAGTCAACGACATGGATATCCAACAACCTATTCTCAATCTCTGTCGTGTAGCAATTGTTGTTTTCACCAAAACCTATTCTCAATCTGCTTGGTGTCTTCATCAGCTTCAACAAATCATTGAGTGGCACAAAACTTATTACCGACATGTTCTGCCCGTATATTACGAAATTCAGCCATCTGATGTTCGTCTTCAAAGGGGTGATTTTGGAAAAACCCTCAAAGCAACTGCACAGCAATCATTTTCAGCACAACAACTGGAGCATGGCATGTCCGGGTGGAACCACGCACTCAGCAAAACTGCAGATTTTTTTGGATGGGATGAGAGCAATTACAGGAGTGATGCTGAAGTAGTGGACAAAATTGTTAAGAGCGTTCTTAATTTAGCAGTCTTGTCTGCTACTAAATTTCCAGTTGGATTACAATCCCGTATGGAGGAAGTGATTCAAATTATAAAAAAAGAATCCACGAAAGTTTGTAGGATAGCGATATGTGGAAAGGGAGGGTCAGGTAAAACCACACTTGCTAAAGCCATCTATGATCAAATTCATGATACATTCACAGAGAAATTTTTCATTGAAGATTTTGAACAAAAACAACTTTGTAGCATTGAGATGGGAAGAAGTTTGATTCCGGAAAGAATTTATGGGAAAAAGGTGCTCATTGTACTTGACGATGTGAATTTTTCTTATTATTTAGAAATGATTGTAAGGTCACGTTTCGGTGAAGGAACTGTAATAATCGTTACAACAACAAAACAAAACCCACCGTTCACAAGAGATCTTTATTCTATTTTTCAGATAAACTTAATGAACCCAAACGAGTCCCTTGAGCTTCTTAGTTGGCACGCATTTAGAGAAGCAAAACCAAAAGACGAATACCATTTCCTTGCAAAAAGAGTAGTTGCTTATTGTGGAGGACTACCTCTACTTCTTGAAGTCATTGGAAGTTGTTTGTATGAAAGGACGAAGGAAGAATGGAATAACGTATTGTCAAGATTAGAACGTCTTCCCCAGCATAAAGTTCTAGAGATATTGAAAATAAGTTTCGACGGTTTACCTAATCAATATGAAAGAAATTTATTCCTTGATATATGTTGTTTCTTTGTTGGTAAAGATAGAGTCTATGTTACAAAGATCCTGAATGGTTGTGGAGTAAACGCTGAAAGTGGAATCAGAATTCTCATAGAACGTAGTCTCATAATAGTTAAAAATAACAAGTTTGGATTGCATCCTTTGCTAAGAGAAATGGCAAGAGAAATTGTTGCCAAAATTACTTCAGGAAAGGAACCTGAGAAGACCAGTCGACTGTGGTTTGATAAGGATGTACTGTTAGAGCATATTCTATTTTCATCACAGGATAAAAAAGTCATTCAGAGATTCCCTCCGAAATGGTTTCTAACTGTAAGAGATTTCTTCAAACATGATTATTTAGAGGTAAGAGACGCAATAAGAAGGATGAAACTCGGTGGACATTGTGAGTACCGCTCTAAGGAACTAGGATGGATTAGGTTGGAAAATTTTTCTTCAGAATTCCTACCTATTGGATTTCTACGTGATGCAATAGCCATTGATTTAAAACACAGTCTTCCTCGACTCGTCTGGAAAGAACCCCAGGTTTTGGCATCACTAACAGTCCTTAATCTTAGTCACTCCAAGTACTTGACAGAAACCCCTGACTTTTCGAGACTACCAAGTCTTGAACAACTCATTCTCAAAGATTGCCCAAGATTGTGCGAAGTGCACCAATCTATTGGAGGTCTCTGCAATCTTACACTTCTAAATTTGAAGGACTGTACAAGGATAAAGAATCTTCCCAGAGAGATATATATGTTGAAATCTTTAAAAACACTCATTCTTTCTGGTTGTTCCGGGATTCACCTAATGGAAAAAGATATAAGGCAAATGGAATCCTTGATAACTCTAATTACTGAAAGTACAGTTATGAAACAAGTTCCTTTTTCAATTGTAAGCTCAAAAAGTATTGGATATTTGTCTCTTCGAGGATTTGAGGGATTATCACATAATCTTTTTCCTTTTATCATGCGGTCTTGGATGTTGCCATCAATGAACCCCCTATCTTATTATCATTCCTTTTGCATGGATGTGGAAGTTAATAGTTGGGATGATATTGCGCCATTACTTAGGATCCTTGTCAATCTTCGAAGTGTTTTGTTGCAATGTGAGACGGAGTTTCAACTATCTAAGCAAGTACAAGATATTTTGGTCGAATATGGTGTAAATATTACAGAATCACACACTTCAAAGCAGCACTTCAGGTCTCTTTTGATCGGTGATGGAAGATGCAAAGAATTCCTCGATGCTTTCAGCGATAGCATTTCCGAGGTATTTGCAGGAAGTGAATCTTGTGATGTTTCTCTTCCAGGTGACAATAATCCTAATTGTTTGGCCGATATGGGTGAGGGCTATTCTGTTTCTTTCACTGTGCCTCGGGATCGTGACATAAAGGGAATGGCTTTGTGTGCAGTTTATTTATCAACCCCTGAAATTGTGGCAACCGAAGATCTTAGAAGTGTCTTAATTGTTAATTATACAAAATGCACATTGCATATACACAACCATGGCACGGTAATTTTCTTTAACGATAAAGATTGGGAGGGTATAATATCAAATTTAGGATCAGGAGACAAGGTTGAGATTTTCGTGATTTTTGGTCATGGATTGGTAGTGAGGAGAACAATTGTGTATCTTATATTTGGTGAATCATATGACATAGAAAAGGAGTCTACATCAAAGAAAAATTCCCTCATTAGATTTATAAAAAAATTGTAA 3084 0.3752 MVLTRFHGYKQILIFCYFEWFCVCKEIISHVLHYCFLFQHFRTSPVSSMEFASSTSKLPQMYDMLINFNGEDIHRKFVSHLDSVLSAAGLTTLLHHQNAVNDMDIQQPILNLCRVAIVVFTKTYSQSAWCLHQLQQIIEWHKTYYRHVLPVYYEIQPSDVRLQRGDFGKTLKATAQQSFSAQQLEHGMSGWNHALSKTADFFGWDESNYRSDAEVVDKIVKSVLNLAVLSATKFPVGLQSRMEEVIQIIKKESTKVCRIAICGKGGSGKTTLAKAIYDQIHDTFTEKFFIEDFEQKQLCSIEMGRSLIPERIYGKKVLIVLDDVNFSYYLEMIVRSRFGEGTVIIVTTTKQNPPFTRDLYSIFQINLMNPNESLELLSWHAFREAKPKDEYHFLAKRVVAYCGGLPLLLEVIGSCLYERTKEEWNNVLSRLERLPQHKVLEILKISFDGLPNQYERNLFLDICCFFVGKDRVYVTKILNGCGVNAESGIRILIERSLIIVKNNKFGLHPLLREMAREIVAKITSGKEPEKTSRLWFDKDVLLEHILFSSQDKKVIQRFPPKWFLTVRDFFKHDYLEVRDAIRRMKLGGHCEYRSKELGWIRLENFSSEFLPIGFLRDAIAIDLKHSLPRLVWKEPQVLASLTVLNLSHSKYLTETPDFSRLPSLEQLILKDCPRLCEVHQSIGGLCNLTLLNLKDCTRIKNLPREIYMLKSLKTLILSGCSGIHLMEKDIRQMESLITLITESTVMKQVPFSIVSSKSIGYLSLRGFEGLSHNLFPFIMRSWMLPSMNPLSYYHSFCMDVEVNSWDDIAPLLRILVNLRSVLLQCETEFQLSKQVQDILVEYGVNITESHTSKQHFRSLLIGDGRCKEFLDAFSDSISEVFAGSESCDVSLPGDNNPNCLADMGEGYSVSFTVPRDRDIKGMALCAVYLSTPEIVATEDLRSVLIVNYTKCTLHIHNHGTVIFFNDKDWEGIISNLGSGDKVEIFVIFGHGLVVRRTIVYLIFGESYDIEKESTSKKNSLIRFIKKL 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00480 1027 Gene3D - 225 353 IPR027417 -
Viun10g00480 1027 ProSiteProfiles TIR domain profile. 60 227 IPR000157 GO:0007165
Viun10g00480 1027 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 62 740 IPR044974 GO:0006952
Viun10g00480 1027 Pfam NB-ARC domain 308 435 IPR002182 GO:0043531
Viun10g00480 1027 Gene3D Ribonuclease Inhibitor 593 745 IPR032675 -
Viun10g00480 1027 Gene3D - 368 451 IPR042197 -
Viun10g00480 1027 SUPERFAMILY "Winged helix" DNA-binding domain 438 540 IPR036390 -
Viun10g00480 1027 PRINTS Disease resistance protein signature 258 273 - -
Viun10g00480 1027 PRINTS Disease resistance protein signature 707 723 - -
Viun10g00480 1027 PRINTS Disease resistance protein signature 402 416 - -
Viun10g00480 1027 Pfam TIR domain 62 224 IPR000157 GO:0007165
Viun10g00480 1027 SUPERFAMILY L domain-like 593 830 - -
Viun10g00480 1027 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 218 462 IPR027417 -
Viun10g00480 1027 SUPERFAMILY Toll/Interleukin receptor TIR domain 52 200 IPR035897 -
Viun10g00480 1027 Gene3D - 55 224 IPR035897 -
Viun10g00480 1027 SMART till_3 61 201 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00480 Viun-Chr10 4330760 4337256 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00480 652 765 WRKY Transcription Factor Family AT5G45050 32.456 4.07e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00480 - - vun:114165123 1310.43