Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00473 ATGGTCTTAACGCGCTTCCACGGCTATAAACAAATATTAATCTTTTGCTACTTTGAATGGTTTTGTGTCTGTAAAGAGATCATCTCTCATGTGTTGCATTATTGCTTTCTCTTCCAACACTTCAGAACGTCACCAGTTTCTTCCATGGAATTCGCCTCTTCAACTTCCAAACTTCCACAGATGTATGATATGCTGATTAACTTCAATGGAGAAGACATCCACAGGAAATTTGTTTCTCATCTCGATTCTGTCCTCTCTGCTGCTGGACTCACCACTCTCCTTCACCACCAGAATGCAGTCAACGACATGGATATCCAACAACCTATTCTCAATCTCTGTCGTGTAGCAATTGTTGTTTTCACCAAAACCTATTCTCAATCTGCTTGGTGTCTTCATCAGCTTCAACAAATCATTGAGTGGCACAAAACTTATTACCGACATGTTCTGCCCGTATATTACGAAATTCAGCCATCTGATGTTCGTCTTCAAAGGGGTGATTTTGGAAAAACCCTCAAAGCAACTGCACAGCAATCATTTTCAGCACAACAACTGGAGCATGGCATGTCCGGGTGGAACCACGCACTCAGCAAAACTGCAGATTTTTTTGGATGGGATGAGAGCAATTACAGGAGTGATGCTGAAGTAGTGGACAAAATTGTTAAGAGCGTTCTTAATTTAGCAGTCTTGTCTGCTACTAAATTTCCAGTTGGATTACAATCCCGTATGGAGGAAGTGATTCAAATTATAAAAAAAGAATCCACGAAAGTTTGTAGGATAGCGATATGTGGAAAGGGAGGGTCAGGTAAAACCACACTTGCTAAAGCCATCTATGATCAAATTCATGATACATTCACAGAGAAATTTTTCATTGAAGATTTTGAACAAAAACAACTTTGTAGCATTGAGATGGGAAGAAGTTTGATTCCGGAAAGAATTTATGGGAAAAAGATAAACTTAATGAACCCAAACGAGTCCCTTGAGCTTCTTAGTTGGCACGCATTTAGAGAAGCAAAACCAAAAGACGAATACCATTTCCTTGCAAAAAGAGTAGTTGCTTATTGTGGAGGACTACCTCTACTTCTTGAAGTCATTGGAAGTTGTTTGTATGAAAGGACGAAGGAAGAATGGAATAACGTATTGTCAAGATTAGAACGTCTTCCCCAGCATAAAGTTCTAGAGATATTGAAAATAAGTTTCGACGGTTTACCTAATCAATATGAAAGAAATTTATTCCTTGATATATGTTGTTTCTTTGTTGGTAAAGATAGAGTCTATGTTACAAAGATCCTGAATGGTTGTGGAGTAAACGCTGAAAGTGGAATCAGAATTCTCATAGAACGTAGTCTCATAATAGTTAAAAATAACAAGTTTGGATTGCATCCTTTGCTAAGAGAAATGGCAAGAGAAATTGTTGCCAAAATTACTTCAGGAAAGGAACCTGAGAAGACCAGTCGACTGTGGTTTGATAAGGATGTACTGTTAGAGCATATTCTATTTTCATCACAGGATAAAAAAGTCATTCAGAGATTCCCTCCGAAATGGTTTCTAACTGTAAGAGATTTCTTCAAACATGATTATTTAGAGGTAAGAGACGCAATAAGAAGGATGAAACTCGGTGGACATTGTGAGTACCGCTCTAAGGAACTAGGATGGATTAGGTTGGAAAATTTTTCTTCAGAATTCCTACCTATTGGATTTCTACGTGATGCAATAGCCATTGATTTAAAACACAGTCTTCCTCGACTCGTCTGGAAAGAACCCCAGGTTTTGGCATCACTAACAGTCCTTAATCTTAGTCACTCCAAGTACTTGACAGAAACCCCTGACTTTTCGAGACTACCAAGTCTTGAACAACTCATTCTCAAAGATTGCCCAAGATTGTGCGAAGTGCACCAATCTATTGGAGGTCTCTGCAATCTTACACTTCTAAATTTGAAGGACTGTACAAGGATAAAGAATCTTCCCAGAGAGATATATATGTTGAAATCTTTAAAAACACTCATTCTTTCTGGTTGTTCCGGGATTCACCTAATGGAAAAAGATATAAGGCAAATGGAATCCTTGATAACTCTAATTACTGAAAGTACAGTTATGAAACAAGTTCCTTTTTCAATTGTAAGCTCAAAAAGTATTGGATATTTGTCTCTTCGAGGATTTGAGGGATTATCACATAATCTTTTTCCTTTTATCATGCGGTCTTGGATGTTGCCATCAATGAACCCCCTATCTTATTATCATTCCTTTTGCATGGATGTGGAAGTTAATAGTTGGGATGATATTGCGCCATTACTTAGGATCCTTGTCAATCTTCGAAGTGTTTTGTTGCAATGTGAGACGGAGTTTCAACTATCTAAGCAAGTACAAGATATTTTGGTCGAATATGGTGTAAATATTACAGAATCACACACTTCAAAGCAGCACTTCAGGTCTCTTTTGATCGGTGATGGAAGATGCAAAGAATTCCTCGATGCTTTCAGCGATAGCATTTCCGAGGTATTTGCAGGAAGTGAATCTTGTGATGTTTCTCTTCCAGGTGACAATAATCCTAATTGTTTGGCCGATATGGGTGAGGGCTATTCTGTTTCTTTCACTGTGCCTCGGGATCGTGACATAAAGGGAATGGCTTTGTGTGCAGTTTATTTATCAACCCCTGAAATTGTGGCAACCGAAGATCTTAGAAGTGTCTTAATTGTTAATTATACAAAATGCACATTGCATATACACAACCATGGCACGGTAATTTTCTTTAACGATAAAGATTGGGAGGGTATAATATCAAATTTAGGATCAGGAGACAAGGTTGAGATTTTCGTGATTTTTGGTCATGGATTGGTAGTGAGGAGAACAATTGTGTATCTTATATTTGGTGAATCATATGACATAGAAAAGGAGTCTACATCAAAGAAAAATTCCCTCATTAGATTTATAAAAAAATTGTAA 2940 0.3772 MVLTRFHGYKQILIFCYFEWFCVCKEIISHVLHYCFLFQHFRTSPVSSMEFASSTSKLPQMYDMLINFNGEDIHRKFVSHLDSVLSAAGLTTLLHHQNAVNDMDIQQPILNLCRVAIVVFTKTYSQSAWCLHQLQQIIEWHKTYYRHVLPVYYEIQPSDVRLQRGDFGKTLKATAQQSFSAQQLEHGMSGWNHALSKTADFFGWDESNYRSDAEVVDKIVKSVLNLAVLSATKFPVGLQSRMEEVIQIIKKESTKVCRIAICGKGGSGKTTLAKAIYDQIHDTFTEKFFIEDFEQKQLCSIEMGRSLIPERIYGKKINLMNPNESLELLSWHAFREAKPKDEYHFLAKRVVAYCGGLPLLLEVIGSCLYERTKEEWNNVLSRLERLPQHKVLEILKISFDGLPNQYERNLFLDICCFFVGKDRVYVTKILNGCGVNAESGIRILIERSLIIVKNNKFGLHPLLREMAREIVAKITSGKEPEKTSRLWFDKDVLLEHILFSSQDKKVIQRFPPKWFLTVRDFFKHDYLEVRDAIRRMKLGGHCEYRSKELGWIRLENFSSEFLPIGFLRDAIAIDLKHSLPRLVWKEPQVLASLTVLNLSHSKYLTETPDFSRLPSLEQLILKDCPRLCEVHQSIGGLCNLTLLNLKDCTRIKNLPREIYMLKSLKTLILSGCSGIHLMEKDIRQMESLITLITESTVMKQVPFSIVSSKSIGYLSLRGFEGLSHNLFPFIMRSWMLPSMNPLSYYHSFCMDVEVNSWDDIAPLLRILVNLRSVLLQCETEFQLSKQVQDILVEYGVNITESHTSKQHFRSLLIGDGRCKEFLDAFSDSISEVFAGSESCDVSLPGDNNPNCLADMGEGYSVSFTVPRDRDIKGMALCAVYLSTPEIVATEDLRSVLIVNYTKCTLHIHNHGTVIFFNDKDWEGIISNLGSGDKVEIFVIFGHGLVVRRTIVYLIFGESYDIEKESTSKKNSLIRFIKKL 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00473 979 ProSiteProfiles TIR domain profile. 60 227 IPR000157 GO:0007165
Viun10g00473 979 Pfam NB-ARC domain 315 387 IPR002182 GO:0043531
Viun10g00473 979 Gene3D - 230 320 IPR027417 -
Viun10g00473 979 Gene3D - 321 403 IPR042197 -
Viun10g00473 979 SUPERFAMILY Toll/Interleukin receptor TIR domain 52 200 IPR035897 -
Viun10g00473 979 SUPERFAMILY L domain-like 545 782 - -
Viun10g00473 979 PRINTS Disease resistance protein signature 258 273 - -
Viun10g00473 979 PRINTS Disease resistance protein signature 659 675 - -
Viun10g00473 979 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 218 414 IPR027417 -
Viun10g00473 979 Pfam TIR domain 62 224 IPR000157 GO:0007165
Viun10g00473 979 Gene3D Ribonuclease Inhibitor 540 700 IPR032675 -
Viun10g00473 979 SUPERFAMILY "Winged helix" DNA-binding domain 390 492 IPR036390 -
Viun10g00473 979 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 321 692 IPR044974 GO:0006952
Viun10g00473 979 SMART till_3 61 201 IPR000157 GO:0007165
Viun10g00473 979 Gene3D - 59 229 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00473 Viun-Chr10 4291838 4298334 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00473 62 705 WRKY Transcription Factor Family AT4G12020 25.167 3.72e-36 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00473 - - vun:114165123 1258.43