Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00470 ATGGACAAGTTCTTCGAGGATGTGGAGGACGTGAAAGAGGACATGAGGAGCGTGGAGATGCTGTACAGAAAGCTGCAAGAGGCGAACGAGGAGAGCAAAACGGCGAAGGCGATGAAGGAGATTCAGGCGCGCATGGATAAGGACGTGGAGCTGGTGCTGAAGCGCGCGAAGGTGGTAAAGGGGAAGCTGGAGGCGCTGGAGCAGTCGAACGCGGCGAACCGGAGCTTGCCGGGGTGCGGGCCGGGGTCGTCGGCGGACCGGACGAGGACGTCGGTGGTGAGCGGGTTGGGGAAGAAGCTGAAGGACATGGTGGCTGGTGCGTGA 324 0.6173 MDKFFEDVEDVKEDMRSVEMLYRKLQEANEESKTAKAMKEIQARMDKDVELVLKRAKVVKGKLEALEQSNAANRSLPGCGPGSSADRTRTSVVSGLGKKLKDMVAGA 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00470 107 Gene3D - 1 106 - -
Viun10g00470 107 SUPERFAMILY t-snare proteins 1 104 IPR010989 GO:0016020|GO:0016192
Viun10g00470 107 Coils Coil 8 38 - -
Viun10g00470 107 SMART SynN_4 1 104 IPR006011 GO:0016020
Viun10g00470 107 Pfam Syntaxin 3 104 IPR006011 GO:0016020
Viun10g00470 107 MobiDBLite consensus disorder prediction 70 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00470 Viun-Chr10 4277186 4277509 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00470 1 104 SNARE and Associated Proteins AT1G11250 67.290 2.49e-47 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00470 K08486 - vun:114166996 189.119