Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00469 ATGGAATTCGCCTCTTCAACTTCCAAACTCCCACATATGTATGATGTGCTGATTAACTTCAATGGAGAAGACATCCACAGGAAATTTGTTTCTCATCTCGATTCTGTCCTCTCTGCTGCTGGACTCACCACTTTCCTTCACCACCAGAATGCAGTCAACGACATGGATATCCAACAACCTATTCTCAATCTCTGTCGTGTAGCAATTGTTGTTTTCACCAAAACCTATTCTCAATCTGCTTGGTGTCTTCATCAGCTTCAACAAATCATTGAGTGGCACAAAACTTATTACCGACATGTTCTGCCCGTATATTACGAAATTCAGCCATCTGATGTGCGTCTTCAGACGGAAGATTTTGGAAAAGACCTCAAAGCAACTGCACAACAAACATTTTCAGCACAACAACTGGAGCATGGGAGGTCCATGTGGAGCCACGCACTCAGCAAAACTGCAGAATTTTTTGGATGGGATGAGAGCAATTACAGGAGTGATGCTGAACTAGTGGACACAATTGTTAAAAGCATTCTTAATTTACCCGTCTTGTCTGCTACTAAATTTCCAATTGGTTTACAACCCCACGTGGAAGATGTGATTCAAATTATAAAAAATAAATCCAATGGGGTTTGTACTGTAGGGATATGTGGAATTGGAGGATCCGGTAAAACCACACTTGCCAAAGCCATCTATAACCAAATTCATGCTAAATTCTTGGAGAAAAGTTTTATTGAAGATATTTCAGAAGTTAGTCGAACACGAATGCATGCTCATTTACAACAACGACTTCTTTCAGATCTCCTAAAAACAAAGGTGGAGATACGTAGAGTTGAGATGGGAAGAAATATGATTAGGGAAAGACTTTATGGGAAAAAGGTGCTCATTGTACTTGACGATGTGAATGAGTATGGGCCATTGGACCTATGGGAAAGTAGTGCAAGGTTCGGTGAAGGAACTGTAATAATCATTACATCAAGAGATGAAAGCCTACTGAGGACACATCAAGTTGATTCTATTTTCCGGATGAATCTAATGAACCCAAACAAGTCCCTTGAGCTTCTTAGTTGGCACGCATTTAGAGATGCAAAACCAAAAGAGGAATGTCATTTCCTTGCAAAAATGGTAGTTGATTATTGTGGAGGACTACCACTAGCTCTTGAAGTCATTGGATCTTTTTTATATGAAAGGACTAAAGAAGAATGGAATAAAGTATTGTCAAGATTAGAATGTCTTCCCCAACATGAAGTTATAGAGATATTGAAAATAAGTTTCGACGGTTTACCTAATGAAATTGAAAGAAATTTATTCCTTGATATATGTTGTTTCTTTGTTGGTAATGACAGAGTCTATGTTACCAAGATCTTAAATGACTGTGGAGTAGACCCTGATAGAGGAATAAGAGTTCTCATAAAGCGTAACCTCATAAAAGTTAGAAAGAACAACAAATTTGGAATGCATCCTTTGCTACGACAAATGGCAAGACAAATTATTAGCGAAATTTTAAGTAAGGAACCTGGGAAAATCAGTGGGCTGTGGCTTGATGAGGATATGGAACATGCACTGTCATGGTATACTCTATTTTCATCACAGCAGACAAAAGTCATTGAAAGATTGCCTAGCGGAAGAGATTTCTTCGAACGTTATCCTTATCCTTCCGAGGTAAGAGAGCCATCAAGAACACCGGTGAATCTGGCTGGAGTTTCTTGGTCCCTTTATGAGAAAGTAAGATGGGTCAGTTTGAAAGGGTTTTCTTCAGAATACCTACCAAACGACTTTTATCTGCATGATGCAATAGTGATTGATTTAAAACACAATCTTCTTCGACTGGTCTGGAAAGAACCTCAGGTCTTGGCGCGGCTAAAAGTCCTTAATCTTAGTCATTCCATTTACTTGACAGAAACCCCTGACTTTTCGAGACTACCAGCTCTCCAACAACTCATTCTCAAAAATTGCCAAAGATTGCGTGAAGTACACCGCTCTATTGGATTTCTCTACAATCTTACATTACTAAATTTGAAGGGCTGTACAGGTCTAAGCAATCTCCCCAGAGAGATATATATGTTGAAATCTTTAAAAGCTCTCGTTCTTTCTGGTTGTTCCAAAATTGTCCTACTGGAGAAAGATATAGTGCAAATGGAATCCTTGATAACCCTAATTTCTGAAAATACAGTTGTGAAACAAGTGCCTTTTTCGATTGCAAGTTCAAAAAGCATTGGATATATATCCTTATGTGGATTAGAGGAAGTGTCACATAATCTTTTTCCTTTTATCATTCGGTCTCAGATGTCACCAACAATGAATCCCCTATCTTATATTCATACTTTCAGTGATATGGAGGATAATAGTTGGGATGACATTGTACCATTTTTTAACAGTCTTGCAATTCTTCGAAGTGTTTTGGTGCAATGTGACCCCGAGTTTCAACTATCTAAGCAACTAAAAGCGATACTGGTGGATTATTGTGTAAATATTACAGAATCAAGAATTTCAAAGCATCACTTAAGGTCTTGCTTGGTTGGTGTTGGAAGATACGAAGAATTCTTCAATAGTGTCAACGATGGCATATCTGAGGTATTGGCAAGTAGTGGGTCATGTGATGTTTGTCTACCAGGTGACAATTATCCTTATTGGTCGGCACATAGGGGTGAGGGACATTCTGCGTCTTTCACTGTGCCTCGGGATTGTGTGATGAAGGGCATGATTTTATGTGTTGTTTGTTTATCAACTCCCGAAATCATTGAACCTGAACTTACTACTGTCTTAATTGGTAATTACACGAGGTGCACATTACAGATACACAACCATGGCACAGTAATTTCCTTTAATGATGAAGATTGGCATCACATAATATCAAATTTAGGATCTGGAGACAGAGTGGAGATTTTTGTGTCTTCTGCTTATGGATTGGTGGTTAAGGAGACAGCTGTTTATTTGATGCATGGTGAGCCAAAGAAAAATTCCCTCATAAGATCCATAAAGAAAATTATAATGTGA 2988 0.3849 MEFASSTSKLPHMYDVLINFNGEDIHRKFVSHLDSVLSAAGLTTFLHHQNAVNDMDIQQPILNLCRVAIVVFTKTYSQSAWCLHQLQQIIEWHKTYYRHVLPVYYEIQPSDVRLQTEDFGKDLKATAQQTFSAQQLEHGRSMWSHALSKTAEFFGWDESNYRSDAELVDTIVKSILNLPVLSATKFPIGLQPHVEDVIQIIKNKSNGVCTVGICGIGGSGKTTLAKAIYNQIHAKFLEKSFIEDISEVSRTRMHAHLQQRLLSDLLKTKVEIRRVEMGRNMIRERLYGKKVLIVLDDVNEYGPLDLWESSARFGEGTVIIITSRDESLLRTHQVDSIFRMNLMNPNKSLELLSWHAFRDAKPKEECHFLAKMVVDYCGGLPLALEVIGSFLYERTKEEWNKVLSRLECLPQHEVIEILKISFDGLPNEIERNLFLDICCFFVGNDRVYVTKILNDCGVDPDRGIRVLIKRNLIKVRKNNKFGMHPLLRQMARQIISEILSKEPGKISGLWLDEDMEHALSWYTLFSSQQTKVIERLPSGRDFFERYPYPSEVREPSRTPVNLAGVSWSLYEKVRWVSLKGFSSEYLPNDFYLHDAIVIDLKHNLLRLVWKEPQVLARLKVLNLSHSIYLTETPDFSRLPALQQLILKNCQRLREVHRSIGFLYNLTLLNLKGCTGLSNLPREIYMLKSLKALVLSGCSKIVLLEKDIVQMESLITLISENTVVKQVPFSIASSKSIGYISLCGLEEVSHNLFPFIIRSQMSPTMNPLSYIHTFSDMEDNSWDDIVPFFNSLAILRSVLVQCDPEFQLSKQLKAILVDYCVNITESRISKHHLRSCLVGVGRYEEFFNSVNDGISEVLASSGSCDVCLPGDNYPYWSAHRGEGHSASFTVPRDCVMKGMILCVVCLSTPEIIEPELTTVLIGNYTRCTLQIHNHGTVISFNDEDWHHIISNLGSGDRVEIFVSSAYGLVVKETAVYLMHGEPKKNSLIRSIKKIIM 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00469 995 SMART till_3 13 153 IPR000157 GO:0007165
Viun10g00469 995 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 127 IPR035897 -
Viun10g00469 995 SUPERFAMILY L domain-like 547 824 - -
Viun10g00469 995 Gene3D - 176 337 IPR027417 -
Viun10g00469 995 Gene3D - 7 175 IPR035897 -
Viun10g00469 995 Gene3D Ribonuclease Inhibitor 565 712 IPR032675 -
Viun10g00469 995 SUPERFAMILY "Winged helix" DNA-binding domain 413 517 IPR036390 -
Viun10g00469 995 SMART AAA_5 207 348 IPR003593 GO:0016887
Viun10g00469 995 Pfam TIR domain 14 176 IPR000157 GO:0007165
Viun10g00469 995 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 437 IPR027417 -
Viun10g00469 995 Pfam NB-ARC domain 192 408 IPR002182 GO:0043531
Viun10g00469 995 Gene3D - 343 426 IPR042197 -
Viun10g00469 995 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 721 IPR044974 GO:0006952
Viun10g00469 995 ProSiteProfiles TIR domain profile. 12 179 IPR000157 GO:0007165
Viun10g00469 995 PRINTS Disease resistance protein signature 684 700 - -
Viun10g00469 995 PRINTS Disease resistance protein signature 377 391 - -
Viun10g00469 995 PRINTS Disease resistance protein signature 285 299 - -
Viun10g00469 995 PRINTS Disease resistance protein signature 210 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00469 Viun-Chr10 4248253 4262773 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00469 14 730 WRKY Transcription Factor Family AT4G12020 27.089 3.82e-62 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00469 - - vun:114165123 1306.58