Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00468 ATGTTCTGCCTGTATATTACGAGATTCAGCCATCTGATGTGCGTCTTCAGAAGGGAGATTTTGGAGAAGCATTCAAAGCAACTGCACAACAAACATTTTCAGCACAACAACTGGAGCATGGCATGTCAAGGTGGAGCCACGCGCTCGCCAAAGCAGCAAATTTCTATGGCTGGGATGAGAGCAATTACAGATGTCCAAACACCAAAGGTAGAGGAACGTAACATTGAGAAGGGAAGAAGTATTCCAGAAAGGCATTTTCAGAAAAGGGTGCTCATTGTACTTGACAATGTGAAGCACCATTCTCTATTAATAGCCCTATCCGAAAGTCGTCTGCGGTTTGATAAAGGATCTGTAATAATAATTACAAGTAAAACTGAACAACTATTGAAGACACATGAAGTTGATGCTGTTTTTGGGATAAATCTAATGAACGCAAAAGAGTCTCTTGAGCTTCTTAGTTGGCACGCATTTAGAGAAGCAAAACCAAAAGAAGAATACCATGACCTTGCAAAAGCAATAGTTACCCACTGTGGAGGACTACCTCTGGCTCTTGAAGTCATTGGAACTTACTTATATGAAAGGACGAAAGAAGAATGGCATAGAGTACTGTTCAAATTAGGGAAAACTCCCCAGCATGACGTTCTACCAGTATTGAAAATATGTTTCGAAGGTTTACCTAATCAAATTGAAAGAAATTTATTCCTTGATATATATTGTTTCTTTGTTGGTAAAGATAGAGCCTATGTTACAAAGATCCTAAATGGTTGTGGAGTAGACGCTGATAGTGGAATAAGAATTCTCATAGAACGTAGTCTCATATTAGTTAAAAAGAACAAGTTTGGATTGCATCCTTTGCTAAGAGAAATGGCAAGAGAAATTATTGGCGAAATTACTTCAGGAGAGGAACCTAGGAAGACCAGTCAAGTATGGTTTGATAAGAATGCACATTGTGTACTGTTAGAGAATATTCTCTTTTCATCACAGGAGAAAAAAGTCATTCAGATATTCCATTGGGGATCGTTTTCAACCGCAAGACATTTCTTCAAAGCTGATCCTGTAGAGGTAAGAATGATGAAACTAGAGAGACATTCTGAGTACTCTTCTAAGATACTCAGATGGATTTGCTTGCAAGGGTTTTCTTCAGAATACCTTCCTCTTGGATTTCTGCATAATGCAATAGCCATTGATTTAAAACACAGTCTTCTTCGACTCGTCTGGAAAGAACCCCAGGTTTTGGCGTCACTAAAAGTCCTTAATCTTAGTCGCTCCAAGTACTTGAGAAAAACCCCTGACTTTTCGAGACTACCAAGTCTTGAACACCTGATTCTCAAAGATTGCCCAAGATTGTGCGAAGTGCACCAATCTATTGGAGGTCTCTGCAATCTTACACTTCTAAATTTGAAGGACTGTACAAGGATAAAGAATCTTCCCAGAGAGATATATATGTTGAAATCTTTAAAAACACTCATTCTTTCTGGTTGTTCGAGGATTCACCTATTGGAAAAACATATAGTGCAAATGGAATCCTTGATAACTCTAATTACTGAAAATACAGCCATGAAACAAGTGCCTTTTTCAATTGTAAGCTCAAAAAGTATTGGATATTTATCTTTACAAGGATTTGAGGGATTATCACATAATCTTTTTCCTTTTATCATTCGGTCTTGGATGTTGCCACTAATGAACCCCCAACCTTATCATTGTTCGTTTTGCACTGATATGGAGGTCCATAGTTGCGATGATATTGGGCCATTGCTTAGCATCATTTCCAATATTCGAAGTGTTTTGGTGCAATGTGACACCGAGTTTCAACTATCTAAGCAAGTACAAATTATTTTGGTTGAATATGGTGTAAATAGTACAGAATCAGACACTTCAAAGCAGCACTTCAGGTCTTCTTTGATCGGTGTTGGAAGATGCAAAGAATTCTTCGATGCTTTCAGTGAAAGAGTTTCCAAGGTATATGCAGGAAGTGAATATTGTGATGTCTCTCTTCTAGGTGACAATGGTCCTAATTGGTTAGCCCATATGGGTGAGGGATATTCTGTTTCATTCACTGTGCCTCGGGATCGTGACATAAAGGGAATGGCTTTGTGTGTAGTTTATTTATCAACCACTGAAATTGTGGCAACTGCATGTCTTAGGAGTATCTTAATTGTTAATTACACAAAGTGCACATTACATATACACAACCATGACTCAGTAATTTCCTTAAATGATAAAGATTGGGAGGGTATAATATCAAATTTAGGATCAGGAGATAGGGTGGAAATTTTTGTGAATTTTGGTCATGGATTGGTAGTCAAGAACACAAGTGTCTATCTTATATATGGTGATTCCAAGAGCTTGGAAATGGGGCCTCACCATGAGCCAAAGGAAAATGCTCTGAATAAATTCATTGAGAAAATTGTAATGTGTGACTTCTGCAAGTTATTGTTCTTCTTTGGGAACAAATGA 2457 0.3793 MFCLYITRFSHLMCVFRREILEKHSKQLHNKHFQHNNWSMACQGGATRSPKQQISMAGMRAITDVQTPKVEERNIEKGRSIPERHFQKRVLIVLDNVKHHSLLIALSESRLRFDKGSVIIITSKTEQLLKTHEVDAVFGINLMNAKESLELLSWHAFREAKPKEEYHDLAKAIVTHCGGLPLALEVIGTYLYERTKEEWHRVLFKLGKTPQHDVLPVLKICFEGLPNQIERNLFLDIYCFFVGKDRAYVTKILNGCGVDADSGIRILIERSLILVKKNKFGLHPLLREMAREIIGEITSGEEPRKTSQVWFDKNAHCVLLENILFSSQEKKVIQIFHWGSFSTARHFFKADPVEVRMMKLERHSEYSSKILRWICLQGFSSEYLPLGFLHNAIAIDLKHSLLRLVWKEPQVLASLKVLNLSRSKYLRKTPDFSRLPSLEHLILKDCPRLCEVHQSIGGLCNLTLLNLKDCTRIKNLPREIYMLKSLKTLILSGCSRIHLLEKHIVQMESLITLITENTAMKQVPFSIVSSKSIGYLSLQGFEGLSHNLFPFIIRSWMLPLMNPQPYHCSFCTDMEVHSCDDIGPLLSIISNIRSVLVQCDTEFQLSKQVQIILVEYGVNSTESDTSKQHFRSSLIGVGRCKEFFDAFSERVSKVYAGSEYCDVSLLGDNGPNWLAHMGEGYSVSFTVPRDRDIKGMALCVVYLSTTEIVATACLRSILIVNYTKCTLHIHNHDSVISLNDKDWEGIISNLGSGDRVEIFVNFGHGLVVKNTSVYLIYGDSKSLEMGPHHEPKENALNKFIEKIVMCDFCKLLFFFGNK 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00468 818 SUPERFAMILY L domain-like 367 570 - -
Viun10g00468 818 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 237 IPR027417 -
Viun10g00468 818 Gene3D - 18 137 IPR027417 -
Viun10g00468 818 Gene3D - 143 226 IPR042197 -
Viun10g00468 818 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 69 520 IPR044974 GO:0006952
Viun10g00468 818 Gene3D Ribonuclease Inhibitor 352 575 IPR032675 -
Viun10g00468 818 PRINTS Disease resistance protein signature 177 191 - -
Viun10g00468 818 PRINTS Disease resistance protein signature 481 497 - -
Viun10g00468 818 PRINTS Disease resistance protein signature 84 98 - -
Viun10g00468 818 Pfam NB-ARC domain 32 209 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00468 Viun-Chr10 4244600 4248157 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00468 83 499 WRKY Transcription Factor Family AT5G45050 27.293 1.04e-37 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00468 - - vun:114165123 920.998