Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00467 ATGAGCTTAAGAATTTCTTCCATGGGATTCGCGTCTTCATCATCCAAACTCCCATTGATGTTCGATGTAATCATCAATTTTCATGGAGAAGAAGTCCGTAAGAAATTTATTTCCCATCTCGAGTCTGTTCTCTCTACAGTTGGAATCACTACTTACCTTCACCACGAAAATGAAGCAAACGCAATGCCCATCCAACAACCTATTCTCGATCTCTGTCGGATAGCAATTGTTGTTTTCACCAAAACCTATTCTCAATCTGCTTGGTGTCTTCATCAGCTTCATCAAATCATCAAATGGCACGAAACTTATTGTCGACATGTTCTGCCTGTATATTACGAGATTCAGCCATCTGATGTGCGTCTTCAGAAGGGAGATTTTGGAGAAGCATTCAAAGCAACTGCACAACAAACATTTTCAGCACAACAACTGGAGCATGGCATGTCAAGGTGGAGCCACGCGCTCGCCAAAGCAGCAAATTTCTATGGCTGGGATGAGAGCAATTACAGGAGTGATGCTGAACTAGTGGACAAAATTGTTAAGAGCGTTCTTAATTTACCACTCTTGTCTGCTACTAAATTTCCCGTTGGATTACAATCCCATGTGGAAGATGTGATTCACACTATCAAAAATAATTCCACGGAAGTTTGTATTATAGGAATATATGGAATGGAAGGATCTGGTAAAACCACTGTAGCCAAAGCTATCTACAATCAGATTCATGATACTTTCATGGGGAAAATTTTCATTGAAGATATTGCACATGCTAATCGAACAAAATTCCTTCATTTAATAGAAAAAATTCTTTCAGATGTCCAAACACCAAAGGTAGAGGAACGTAACATTGAGAAGGGAAGAAGTATTCCAGAAAGGCATTTTCAGAAAAGGGTGCTCATTGTACTTGACAATGTGAAGCACCATTCTCTATTAATAGCCCTATCCGAAAGTCGTCTGCGGTTTGATAAAGGATCTGTAATAATAATTACAAGTAAAACTGAACAACTATTGAAGACACATGAAGTTGATGCTGTTTTTGGGATAAATCTAATGAACGCAAAAGAGTCTCTTGAGCTTCTTAGTTGGCACGCATTTAGAGAAGCAAAACCAAAAGAAGAATACCATGACCTTGCAAAAGCAATAGTTACCCACTGTGGAGGACTACCTCTGGCTCTTGAAGTCATTGGAACTTACTTATATGAAAGGACGAAAGAAGAATGGCATAGAGTACTGTTCAAATTAGGGAAAACTCCCCAGCATGACGTTCTACCAGTATTGAAAATATGTTTCGAAGGTTTACCTAATCAAATTGAAAGAAATTTATTCCTTGATATATATTGTTTCTTTGTTGGTAAAGATAGAGCCTATGTTACAAAGATCCTAAATGGTTGTGGAGTAGACGCTGATAGTGGAATAAGAATTCTCATAGAACGTAGTCTCATATTAGTTAAAAAGAACAAGTTTGGATTGCATCCTTTGCTAAGAGAAATGGCAAGAGAAATTATTGGCGAAATTACTTCAGGAGAGGAACCTAGGAAGACCAGTCAAGTATGGTTTGATAAGAATGCACATTGTGTACTGTTAGAGAATATTCTCTTTTCATCACAGGAGAAAAAAGTCATTCAGATATTCCATTGGGGATCGTTTTCAACCGCAAGACATTTCTTCAAAGCTGATCCTGTAGAGGTAAGAATGATGAAACTAGAGAGACATTCTGAGTACTCTTCTAAGATACTCAGATGGATTTGCTTGCAAGGGTTTTCTTCAGAATACCTTCCTCTTGGATTTCTGCATAATGCAATAGCCATTGATTTAAAACACAGTCTTCTTCGACTCGTCTGGAAAGAACCCCAGGTTTTGGCGTCACTAAAAGTCCTTAATCTTAGTCGCTCCAAGTACTTGAGAAAAACCCCTGACTTTTCGAGACTACCAAGTCTTGAACACCTGATTCTCAAAGATTGCCCAAGATTGTGCGAAGTGCACCAATCTATTGGAGGTCTCTGCAATCTTACACTTCTAAATTTGAAGGACTGTACAAGGATAAAGAATCTTCCCAGAGAGATATATATGTTGAAATCTTTAAAAACACTCATTCTTTCTGGTTGTTCGAGGATTCACCTATTGGAAAAACATATAGTGCAAATGGAATCCTTGATAACTCTAATTACTGAAAATACAGCCATGAAACAAGTGCCTTTTTCAATTGTAAGCTCAAAAAGTATTGGATATTTATCTTTACAAGGATTTGAGGGATTATCACATAATCTTTTTCCTTTTATCATTCGGTCTTGGATGTTGCCACTAATGAACCCCCAACCTTATCATTGTTCGTTTTGCACTGATATGGAGGTCCATAGTTGCGATGATATTGGGCCATTGCTTAGCATCATTTCCAATATTCGAAGTGTTTTGGTGCAATGTGACACCGAGTTTCAACTATCTAAGCAAGTACAAATTATTTTGGTTGAATATGGTGTAAATAGTACAGAATCAGACACTTCAAAGCAGCACTTCAGGTCTTCTTTGATCGGTGTTGGAAGATGCAAAGAATTCTTCGATGCTTTCAGTGAAAGAGTTTCCAAGGTATATGCAGGAAGTGAATATTGTGATGTCTCTCTTCTAGGTGACAATGGTCCTAATTGGTTAGCCCATATGGGTGAGGGATATTCTGTTTCATTCACTGTGCCTCGGGATCGTGACATAAAGGGAATGGCTTTGTGTGTAGTTTATTTATCAACCACTGAAATTGTGGCAACTGCATGTCTTAGGAGTATCTTAATTGTTAATTACACAAAGTGCACATTACATATACACAACCATGACTCAGTAATTTCCTTAAATGATAAAGATTGGGAGGGTATAATATCAAATTTAGGATCAGGAGATAGGGTGGAAATTTTTGTGAATTTTGGTCATGGATTGGTAGTCAAGAACACAAGTGTCTATCTTATATATGGTGATTCCAAGAGCTTGGAAATGGGGCCTCACCATGAGCCAAAGGAAAATGCTCTGAATAAATTCATTGAGAAAATTGTAATGTGTGACTTCTGCAAGTTATTGTTCTTCTTTGGGAACAAATGA 3075 0.3776 MSLRISSMGFASSSSKLPLMFDVIINFHGEEVRKKFISHLESVLSTVGITTYLHHENEANAMPIQQPILDLCRIAIVVFTKTYSQSAWCLHQLHQIIKWHETYCRHVLPVYYEIQPSDVRLQKGDFGEAFKATAQQTFSAQQLEHGMSRWSHALAKAANFYGWDESNYRSDAELVDKIVKSVLNLPLLSATKFPVGLQSHVEDVIHTIKNNSTEVCIIGIYGMEGSGKTTVAKAIYNQIHDTFMGKIFIEDIAHANRTKFLHLIEKILSDVQTPKVEERNIEKGRSIPERHFQKRVLIVLDNVKHHSLLIALSESRLRFDKGSVIIITSKTEQLLKTHEVDAVFGINLMNAKESLELLSWHAFREAKPKEEYHDLAKAIVTHCGGLPLALEVIGTYLYERTKEEWHRVLFKLGKTPQHDVLPVLKICFEGLPNQIERNLFLDIYCFFVGKDRAYVTKILNGCGVDADSGIRILIERSLILVKKNKFGLHPLLREMAREIIGEITSGEEPRKTSQVWFDKNAHCVLLENILFSSQEKKVIQIFHWGSFSTARHFFKADPVEVRMMKLERHSEYSSKILRWICLQGFSSEYLPLGFLHNAIAIDLKHSLLRLVWKEPQVLASLKVLNLSRSKYLRKTPDFSRLPSLEHLILKDCPRLCEVHQSIGGLCNLTLLNLKDCTRIKNLPREIYMLKSLKTLILSGCSRIHLLEKHIVQMESLITLITENTAMKQVPFSIVSSKSIGYLSLQGFEGLSHNLFPFIIRSWMLPLMNPQPYHCSFCTDMEVHSCDDIGPLLSIISNIRSVLVQCDTEFQLSKQVQIILVEYGVNSTESDTSKQHFRSSLIGVGRCKEFFDAFSERVSKVYAGSEYCDVSLLGDNGPNWLAHMGEGYSVSFTVPRDRDIKGMALCVVYLSTTEIVATACLRSILIVNYTKCTLHIHNHDSVISLNDKDWEGIISNLGSGDRVEIFVNFGHGLVVKNTSVYLIYGDSKSLEMGPHHEPKENALNKFIEKIVMCDFCKLLFFFGNK 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00467 1024 Gene3D - 15 181 IPR035897 -
Viun10g00467 1024 Pfam NB-ARC domain 198 415 IPR002182 GO:0043531
Viun10g00467 1024 Gene3D Ribonuclease Inhibitor 558 780 IPR032675 -
Viun10g00467 1024 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 443 IPR027417 -
Viun10g00467 1024 Gene3D - 349 432 IPR042197 -
Viun10g00467 1024 ProSiteProfiles TIR domain profile. 19 186 IPR000157 GO:0007165
Viun10g00467 1024 SUPERFAMILY L domain-like 573 776 - -
Viun10g00467 1024 PRINTS Disease resistance protein signature 217 232 - -
Viun10g00467 1024 PRINTS Disease resistance protein signature 383 397 - -
Viun10g00467 1024 PRINTS Disease resistance protein signature 290 304 - -
Viun10g00467 1024 PRINTS Disease resistance protein signature 687 703 - -
Viun10g00467 1024 SMART till_3 20 160 IPR000157 GO:0007165
Viun10g00467 1024 Pfam TIR domain 21 183 IPR000157 GO:0007165
Viun10g00467 1024 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 163 IPR035897 -
Viun10g00467 1024 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 726 IPR044974 GO:0006952
Viun10g00467 1024 Gene3D - 182 343 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00467 Viun-Chr10 4244600 4248545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00467 21 733 WRKY Transcription Factor Family AT4G12020 26.991 1.76e-53 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00467 - - vun:114165123 1321.61