Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00463 ATGGAGTTGGCTTCTTCTTCTTCATCATCATCAGCATCTTCATCTTCATCCTTCTTAAAATCAGAACCGGTGTTCATATATGATGTGTTCATCAACTTTGGGGGAGAAGACATCGGTAGAAGGTTCGTTTCTCATCTCCATTCTGCCCTTTTACAAGCTCAAGTCAAAACTTTTATTAGCCAGGAAAATGTTCAAGACGGACTGAATCTGGAAGAACACATGCGAGAAATAGCAGTTTCTAAGATCGCAATAATCGTTTTCTCCAAAACATACGCTGAATCTACATGTTGTCTTCTTGAGCTTGAAAAAGTAATTGAATGCCACCAAACCTTTGGGCAAATTGTTCTGCCCATATTTTACGAGATTGATCCATTTGATGTACGTGATCAGAAGAATGATTTTGGAAAAGCGTTGGAAGAAACTGCAGAAAAAAGCTATTTAGGAGAACAAGGGAAACATGCGTTGTCAAGGTGGAGCCATGCACTCAACACAGCTTCAGGTATCACCGGTTGGGATCTCAGAAATTTCAGGCATGATGCTGAATTTGTGGAGGTAATTGTTAATCGCGTTCAGACATTACTGGACTATAAAGACTTGTTTATTACCGAATTTCCTGTTGGATTAGAGTTTCACGTGGAAAAAGTGATTGGATGTATTGAAAATCATTCCACCAAAGTATGTATGATAGGGATATGGGAAATGGTTGGATCGGGTAAAATTACCATAGCCAAAGCCATCTATGATCAAATTTACCATTTATTCATTGGTAAGAGTTTTGTTGAAAATCTTAGAAAAGTTTGGGATCCTGTATCTAGATGGCATCTTCATTTGCAAGAACAACTACTTTACGATGTCCTAAAATCAAAGATTAGCTTGAAAAGCACTTGGATGGAAAGAGTTATGATCGAGAACGAACTTTCTCGAAAAAAGTTGCTCATTGTGCTTGATGATGTGAATGAGTTAGGCCAATTACGAAATCTATGTGGGAGTCGTGATTGGTTCGGTAAAGGAACTGTGATAATCTTTACAACTAGAGATATTCACTTACTGAACCGACTCAAACTTAATTATGTTTATAGCATGGATGATATGAAGGAAAATGAGTCCCTTGGCTGTGATGGCTTCGGAGAAGCAAAACCAAGAAAAGACTTGTATGAACTTGTAAGAAACGTAGTTGTTTATTGTGGAGGACTACCACTAGCTCTATAA 1209 0.3797 MELASSSSSSSASSSSSFLKSEPVFIYDVFINFGGEDIGRRFVSHLHSALLQAQVKTFISQENVQDGLNLEEHMREIAVSKIAIIVFSKTYAESTCCLLELEKVIECHQTFGQIVLPIFYEIDPFDVRDQKNDFGKALEETAEKSYLGEQGKHALSRWSHALNTASGITGWDLRNFRHDAEFVEVIVNRVQTLLDYKDLFITEFPVGLEFHVEKVIGCIENHSTKVCMIGIWEMVGSGKITIAKAIYDQIYHLFIGKSFVENLRKVWDPVSRWHLHLQEQLLYDVLKSKISLKSTWMERVMIENELSRKKLLIVLDDVNELGQLRNLCGSRDWFGKGTVIIFTTRDIHLLNRLKLNYVYSMDDMKENESLGCDGFGEAKPRKDLYELVRNVVVYCGGLPLAL 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00463 402 PRINTS Disease resistance protein signature 228 243 - -
Viun10g00463 402 PRINTS Disease resistance protein signature 395 402 - -
Viun10g00463 402 PRINTS Disease resistance protein signature 305 319 - -
Viun10g00463 402 Pfam NB-ARC domain 210 402 IPR002182 GO:0043531
Viun10g00463 402 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 199 402 IPR027417 -
Viun10g00463 402 SUPERFAMILY Toll/Interleukin receptor TIR domain 25 171 IPR035897 -
Viun10g00463 402 Pfam TIR domain 27 190 IPR000157 GO:0007165
Viun10g00463 402 Gene3D - 21 196 IPR035897 -
Viun10g00463 402 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 27 402 IPR044974 GO:0006952
Viun10g00463 402 FunFam Disease resistance protein (TIR-NBS-LRR class) 24 196 - -
Viun10g00463 402 SMART till_3 26 168 IPR000157 GO:0007165
Viun10g00463 402 Gene3D - 201 358 IPR027417 -
Viun10g00463 402 ProSiteProfiles TIR domain profile. 25 194 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00463 Viun-Chr10 4180128 4182519 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00463 27 370 WRKY Transcription Factor Family AT4G12020 27.841 2.59e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00463 - - vra:106773334 631.713