Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00458 ATGGAATTCGGTTCCTCAACATCCAAACTCCAATGGAAGTTTGATGTGCTTATCAACTTCACTGGAGAAGACATCCACAAGAAATTTGTTTCTCATCTCGATTCTGTCCTCTCTGCTAATGGGCTCACCACTTTCCTACACCACCAGAATGCATTGCAGCCAATGCACATCCAACAACCTATTCTCAATCTCTGTCGGGTAGCAATTGTTGTTTTCACCAAAACCTATTCTCAATCTGCTTGGTGTCTTCATCAGCTTCAACAAATCATTCAATGGCACCAAACTTATACCCGACATGTTCTGCCCGTATATTACGAAATTCAGCCATCTGATGTACGTCTTCAGAAGGGTGATTTTGGAAAAGCCTTCAAAGCAACTGCACACCAAACATTTTCAAGACCACAATTGGAGCATGGCATGTCTAGGTGGAGCCATGCACTCACCCAAGCTGCAAATTTCTTTGGATGGGATGAGAGCAATTACAGGAGTGATGCCGAACTAGTGGACACAATTGTTAAAAGCATTCTTAATTTACCAGTCTTGTCTGCTACTAAATTTCCAGTTGGATTACAATCCCGCGTGGAAGATGTGATTCAAATTATAAAAGATAGATCCTCGGAAGTTTGTAGGATAGGGATATGTGGAGAGGGAGGATCTGGTAAAACCACCCTTGCCAAAGCTATTTATAATCAAATTGAAGGTACATTCATGGAAAAAAGTTTCATTGAAGATATTGCACAAGTTAGTGAAAGAAGAGGGATTCTTCATTTACAAAAACAGCTTCTTTCGGATGTTCTCAAATCAAAGGTGGAGATACATAGCGATGAGATGGGGAAAAGTATGATTCGGGAAAGACTTTATCGGAAAAGGCTGCTCATTGTACTTGACGATGTGGATGATTATTGTCCAATCGAACTACGGGACAGTAATTCATGTTTCGCTGAAGGAACTGTAATAATCCTTACTATAAGAAATGAAGACAGTTGGATTACGAAACAAGTTCATCCTATTGTTCACACAAATCTAATGAACCCAAATGAGTCCCTCGAGCTTCTTAGTTGGCACGCATTCAGAGAAGCAAGACCAACAGAGGAATTCCATTTCCTTGCGAAAACAATAGTTGCTTATTGTGAAGGACTAGCTCTAGCTCTTGAAGTAATTGGAAGCTATTTATATGAAAAGACGGAGGAAGAATGGAACAGAGTATTCTTAAGATTACCCAACACTCCCGAAAATAAATTTTCAGAGATATTGGAAATAAGCTTCGATGGTTTACATAATCAAATGGAAAAAGATATATTCTTTGATGTATGTTGTTTCTTTGTTGGTACGAGCAGAGCCTATGTCACCAAGATCCTAAATGGCTGTGGAGTAGACTCTGATAGTGGAATAAGAGTTCTCATAGAACGTCACCTCATAAAAATTAAAAAGAACAACAAACTTACAATGCATCCTGTGCTACAAGAAATGGGAAGACGAATTATTGTTCAAAATTCTTTAGAAAACGAGCTTGGGTCGATTAAACCAGTGTGGATTGATATCGATGGAAAATATACCCTGCTAGAGAATATGCTCTTTTCATCACGGGGGGCAAAAGTCATTCGGGGATTGCCTTCAGGAAGAGATTTATTCGAACGTTATCCTTTACAGGTAAGAGATCCACCAAAATGGACGAAACGCACAGGAAATTCTGAGAACCTTTCTCAGAGATGGATCAGTTTGCAAGGATTTCCTTCAGAATACCTACCTCAAGACTTTTATCTGCATCAGGCAATTATCATTGAGATAAAACACAATCTTCTTCGGTTCGTCTGGAAAGAACCCCAGGTTTTGACTTTGCTAAAAGTCCTTAATCTTAGTCACTCCAAGTACCTGAGAAAAACCCCTGACTTTTCGGGGCTACCAAGTCTTGAACAACTCATTCTCAAAGATTGCCCAAGATTGCGCCAAGTACACCAATCTATTGGATGTCTCTACAATCTTACACTGCTAAATTTGAAGGATTGTCCAAGGCTAAACAATCTCCCTAGAGAGATATATATGTTGAAATCTTTAAAAACTCTCATTGTTTCTGGTTGTTCGAAGATTGACCTATTGGAAAAAGATATAGTGCAAATGGAGTCTTTGATAACTCTAGTTACTGAAAATACAGCTGTGAAAGAAGTGCCTTTTTCAATTGTAAGCTCAAAAAACATTGGATATATATCCTTACGCCGATTTGAGGGACTGTCACGTAATCTTTTACCTTCTATCATTCGGTCTCGGATGTCATCAACAATGAATCCCCTTTCTTATATCCATTCGTTCAAGGAAATGGAGGATAATAATTGGGATGATATTGCACCATCTTTCAGCAACCTTGCCAATCTTCGAAGTGTTTTTGTGCAGTGTGACCCTGAGTTTCAATTATCTAACCAACTACAAACTATACTGGTTGAATATGGTGTAAATATTACAGAATCAGTAATTTCACAACACCACTTCAGGTCCTCCTTCATTGGTGTCAGAAGATACAAAGAAATCTTCGATGCTGTCAGTGATAGCATGTCTCAGGTATTGGCAAGTAGTGAATCATGTGATGTTTGTCTCCCAGGTGACAACGATCCTTATTGGTTGGCCTATACGGGTGAGGGACATTCTGTTTCTTTCACTGTGCCTCCGGATCGTGACATAAAGGGAATAGCTTTCTGTGTTGTTTATTTATCAACCTCCAAAATCATTGAACCTGAACTTAATACTGTCTTAATTGTTAATTACACCAAGAGCACATTACATATACACAACCATTGCACAGTAATTACGTTTAGTGATGAAGATTGGCATGACATATTGTCAAATTTAGGATCCGGAGACAAAATCGAGATTTTTGTGGCTTTTGATCATGGATTGGTGGTTAAGAACACTGCTGTGTATCTGATCTATGGTGAGCCAAAGAAAAATTCCCTCATTAGATTCATAAAGAAAATTGTAATGTGA 2976 0.3874 MEFGSSTSKLQWKFDVLINFTGEDIHKKFVSHLDSVLSANGLTTFLHHQNALQPMHIQQPILNLCRVAIVVFTKTYSQSAWCLHQLQQIIQWHQTYTRHVLPVYYEIQPSDVRLQKGDFGKAFKATAHQTFSRPQLEHGMSRWSHALTQAANFFGWDESNYRSDAELVDTIVKSILNLPVLSATKFPVGLQSRVEDVIQIIKDRSSEVCRIGICGEGGSGKTTLAKAIYNQIEGTFMEKSFIEDIAQVSERRGILHLQKQLLSDVLKSKVEIHSDEMGKSMIRERLYRKRLLIVLDDVDDYCPIELRDSNSCFAEGTVIILTIRNEDSWITKQVHPIVHTNLMNPNESLELLSWHAFREARPTEEFHFLAKTIVAYCEGLALALEVIGSYLYEKTEEEWNRVFLRLPNTPENKFSEILEISFDGLHNQMEKDIFFDVCCFFVGTSRAYVTKILNGCGVDSDSGIRVLIERHLIKIKKNNKLTMHPVLQEMGRRIIVQNSLENELGSIKPVWIDIDGKYTLLENMLFSSRGAKVIRGLPSGRDLFERYPLQVRDPPKWTKRTGNSENLSQRWISLQGFPSEYLPQDFYLHQAIIIEIKHNLLRFVWKEPQVLTLLKVLNLSHSKYLRKTPDFSGLPSLEQLILKDCPRLRQVHQSIGCLYNLTLLNLKDCPRLNNLPREIYMLKSLKTLIVSGCSKIDLLEKDIVQMESLITLVTENTAVKEVPFSIVSSKNIGYISLRRFEGLSRNLLPSIIRSRMSSTMNPLSYIHSFKEMEDNNWDDIAPSFSNLANLRSVFVQCDPEFQLSNQLQTILVEYGVNITESVISQHHFRSSFIGVRRYKEIFDAVSDSMSQVLASSESCDVCLPGDNDPYWLAYTGEGHSVSFTVPPDRDIKGIAFCVVYLSTSKIIEPELNTVLIVNYTKSTLHIHNHCTVITFSDEDWHDILSNLGSGDKIEIFVAFDHGLVVKNTAVYLIYGEPKKNSLIRFIKKIVM 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00458 991 Gene3D - 175 335 IPR027417 -
Viun10g00458 991 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 723 IPR044974 GO:0006952
Viun10g00458 991 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 435 IPR027417 -
Viun10g00458 991 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 156 IPR035897 -
Viun10g00458 991 Gene3D - 343 433 IPR042197 -
Viun10g00458 991 Pfam TIR domain 13 176 IPR000157 GO:0007165
Viun10g00458 991 SUPERFAMILY "Winged helix" DNA-binding domain 413 499 IPR036390 -
Viun10g00458 991 SUPERFAMILY L domain-like 562 796 - -
Viun10g00458 991 Gene3D - 6 174 IPR035897 -
Viun10g00458 991 Gene3D Ribonuclease Inhibitor 548 830 IPR032675 -
Viun10g00458 991 PRINTS Disease resistance protein signature 285 299 - -
Viun10g00458 991 PRINTS Disease resistance protein signature 210 225 - -
Viun10g00458 991 PRINTS Disease resistance protein signature 680 696 - -
Viun10g00458 991 PRINTS Disease resistance protein signature 377 391 - -
Viun10g00458 991 SMART till_3 13 153 IPR000157 GO:0007165
Viun10g00458 991 Pfam NB-ARC domain 193 409 IPR002182 GO:0043531
Viun10g00458 991 ProSiteProfiles TIR domain profile. 12 179 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00458 Viun-Chr10 4135334 4139533 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00458 14 772 WRKY Transcription Factor Family AT4G12020 26.092 6.43e-56 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00458 - - vun:114165123 1262.28