Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00457 ATGGAATTCGGTTCCTCAACATCCAAACTCCAATGGAAGTTTGATGTGCTTATCAACTTCACTGGAGAAGACATCCACAAGAAATTTGTTTCTCATCTCGATTCTGTCCTCTCTGCTAATGGGCTCACCACTTTCCTACACCACCAGAATGCATTGCAGCCAATGCACATCCAACAACCTATTCTCAATCTCTGTCGGGTAGCAATTGTTGTTTTCACCAAAACCTATTCTCAATCTGCTTGGTGTCTTCATCAGCTTCAACAAATCATTCAATGGCACCAAACTTATACCCGACATGTTCTGCCCGTATATTACGAAATTCAGCCATCTGATGTACGTCTTCAGAAGGGTGATTTTGGAAAAGCCTTCAAAGCAACTGCACACCAAACATTTTCAAGACCACAATTGGAGCATGGCATGTCTAGGTGGAGCCATGCACTCACCCAAGCTGCAAATTTCTTTGGATGGGATGAGAGCAATTACAGGAGTGATGCCGAACTAGTGGACACAATTGTTAAAAGCATTCTTAATTTACCAGTCTTGTCTGCTACTAAATTTCCAGTTGGATTACAATCCCGCGTGGAAGATGTGATTCAAATTATAAAAGATAGATCCTCGGAAGTTTGTAGGATAGGGATATGTGGAGAGGGAGGATCTGGTAAAACCACCCTTGCCAAAGCTATTTATAATCAAATTGAAGGTACATTCATGGAAAAAAGTTTCATTGAAGATATTGCACAAGTTAGTGAAAGAAGAGGGATTCTTCATTTACAAAAACAGCTTCTTTCGGATGTTCTCAAATCAAAGGTGGAGATACATAGCGATGAGATGGGGAAAAGTATGATTCGGGAAAGACTTTATCGGAAAAGGCTGCTCATTGTACTTGACGATGTGGATGATTATTGTCCAATCGAACTACGGGACAGTAATTCATGTTTCGCTGAAGGAACTGTAATAATCCTTACTATAAGAAATGAAGACAGTTGGATTACGAAACAAGTTCATCCTATTGTTCACACAAATCTAATGAACCCAAATGAGTCCCTCGAGCTTCTTAGTTGGCACGCATTCAGAGAAGCAAGACCAACAGAGGAATTCCATTTCCTTGCGAAAACAATAGTTGCTTATTGTGAAGGACTAGCTCTAGCTCTTGAAGTAATTGGAAGCTATTTATATGAAAAGACGGAGGAAGAATGGAACAGAGTATTCTTAAGATTACCCAACACTCCCGAAAATAAATTTTCAGAGATATTGGAAATAAGCTTCGATGGTTTACATAATCAAATGGAAAAAGATATATTCTTTGATGTATGTTGTTTCTTTGTTGGTACGAGCAGAGCCTATGTCACCAAGATCCTAAATGGCTGTGGAGTAGACTCTGATAGTGGAATAAGAGTTCTCATAGAACGTCACCTCATAAAAATTAAAAAGAACAACAAACTTACAATGCATCCTGTGCTACAAGAAATGGGAAGACGAATTATTGTTCAAAATTCTTTAGAAAACGAGCTTGGGTCGATTAAACCAGTGTGGATTGATATCGATGGAAAATATACCCTGCTAGAGAATATGGTAAGAGATCCACCAAAATGGACGAAACGCACAGGAAATTCTGAGAACCTTTCTCAGAGATGGATCAGTTTGCAAGGATTTCCTTCAGAATACCTACCTCAAGACTTTTATCTGCATCAGGCAATTATCATTGAGATAAAACACAATCTTCTTCGGTTCGTCTGGAAAGAACCCCAGGTTTTGACTTTGCTAAAAGTCCTTAATCTTAGTCACTCCAAGTACCTGAGAAAAACCCCTGACTTTTCGGGGCTACCAAGTCTTGAACAACTCATTCTCAAAGATTGCCCAAGATTGCGCCAAGTACACCAATCTATTGGATGTCTCTACAATCTTACACTGCTAAATTTGAAGGATTGTCCAAGGCTAAACAATCTCCCTAGAGAGATATATATGTTGAAATCTTTAAAAACTCTCATTGTTTCTGGTTGTTCGAAGATTGACCTATTGGAAAAAGATATAGTGCAAATGGAGTCTTTGATAACTCTAGTTACTGAAAATACAGCTGTGAAAGAAGTGCCTTTTTCAATTGTAAGCTCAAAAAACATTGGATATATATCCTTACGCCGATTTGAGGGACTGTCACGTAATCTTTTACCTTCTATCATTCGGTCTCGGATGTCATCAACAATGAATCCCCTTTCTTATATCCATTCGTTCAAGGAAATGGAGGATAATAATTGGGATGATATTGCACCATCTTTCAGCAACCTTGCCAATCTTCGAAGTGTTTTTGTGCAGTGTGACCCTGAGTTTCAATTATCTAACCAACTACAAACTATACTGGTTGAATATGGTGTAAATATTACAGAATCAGTAATTTCACAACACCACTTCAGGTCCTCCTTCATTGGTGTCAGAAGATACAAAGAAATCTTCGATGCTGTCAGTGATAGCATGTCTCAGGTATTGGCAAGTAGTGAATCATGTGATGTTTGTCTCCCAGGTGACAACGATCCTTATTGGTTGGCCTATACGGGTGAGGGACATTCTGTTTCTTTCACTGTGCCTCCGGATCGTGACATAAAGGGAATAGCTTTCTGTGTTGTTTATTTATCAACCTCCAAAATCATTGAACCTGAACTTAATACTGTCTTAATTGTTAATTACACCAAGAGCACATTACATATACACAACCATTGCACAGTAATTACGTTTAGTGATGAAGATTGGCATGACATATTGTCAAATTTAGGATCCGGAGACAAAATCGAGATTTTTGTGGCTTTTGATCATGGATTGGTGGTTAAGAACACTGCTGTGTATCTGATCTATGGTGAGCCAAAGAAAAATTCCCTCATTAGATTCATAAAGAAAATTGTAATGTGA 2898 0.3858 MEFGSSTSKLQWKFDVLINFTGEDIHKKFVSHLDSVLSANGLTTFLHHQNALQPMHIQQPILNLCRVAIVVFTKTYSQSAWCLHQLQQIIQWHQTYTRHVLPVYYEIQPSDVRLQKGDFGKAFKATAHQTFSRPQLEHGMSRWSHALTQAANFFGWDESNYRSDAELVDTIVKSILNLPVLSATKFPVGLQSRVEDVIQIIKDRSSEVCRIGICGEGGSGKTTLAKAIYNQIEGTFMEKSFIEDIAQVSERRGILHLQKQLLSDVLKSKVEIHSDEMGKSMIRERLYRKRLLIVLDDVDDYCPIELRDSNSCFAEGTVIILTIRNEDSWITKQVHPIVHTNLMNPNESLELLSWHAFREARPTEEFHFLAKTIVAYCEGLALALEVIGSYLYEKTEEEWNRVFLRLPNTPENKFSEILEISFDGLHNQMEKDIFFDVCCFFVGTSRAYVTKILNGCGVDSDSGIRVLIERHLIKIKKNNKLTMHPVLQEMGRRIIVQNSLENELGSIKPVWIDIDGKYTLLENMVRDPPKWTKRTGNSENLSQRWISLQGFPSEYLPQDFYLHQAIIIEIKHNLLRFVWKEPQVLTLLKVLNLSHSKYLRKTPDFSGLPSLEQLILKDCPRLRQVHQSIGCLYNLTLLNLKDCPRLNNLPREIYMLKSLKTLIVSGCSKIDLLEKDIVQMESLITLVTENTAVKEVPFSIVSSKNIGYISLRRFEGLSRNLLPSIIRSRMSSTMNPLSYIHSFKEMEDNNWDDIAPSFSNLANLRSVFVQCDPEFQLSNQLQTILVEYGVNITESVISQHHFRSSFIGVRRYKEIFDAVSDSMSQVLASSESCDVCLPGDNDPYWLAYTGEGHSVSFTVPPDRDIKGIAFCVVYLSTSKIIEPELNTVLIVNYTKSTLHIHNHCTVITFSDEDWHDILSNLGSGDKIEIFVAFDHGLVVKNTAVYLIYGEPKKNSLIRFIKKIVM 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00457 965 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 435 IPR027417 -
Viun10g00457 965 Pfam NB-ARC domain 193 409 IPR002182 GO:0043531
Viun10g00457 965 PRINTS Disease resistance protein signature 654 670 - -
Viun10g00457 965 PRINTS Disease resistance protein signature 377 391 - -
Viun10g00457 965 PRINTS Disease resistance protein signature 210 225 - -
Viun10g00457 965 PRINTS Disease resistance protein signature 285 299 - -
Viun10g00457 965 SUPERFAMILY L domain-like 515 770 - -
Viun10g00457 965 Gene3D Ribonuclease Inhibitor 517 804 IPR032675 -
Viun10g00457 965 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 697 IPR044974 GO:0006952
Viun10g00457 965 Gene3D - 343 433 IPR042197 -
Viun10g00457 965 Gene3D - 6 174 IPR035897 -
Viun10g00457 965 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 156 IPR035897 -
Viun10g00457 965 SMART till_3 13 153 IPR000157 GO:0007165
Viun10g00457 965 Pfam TIR domain 13 176 IPR000157 GO:0007165
Viun10g00457 965 SUPERFAMILY "Winged helix" DNA-binding domain 413 499 IPR036390 -
Viun10g00457 965 ProSiteProfiles TIR domain profile. 12 179 IPR000157 GO:0007165
Viun10g00457 965 Gene3D - 175 335 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00457 Viun-Chr10 4135331 4139533 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00457 14 746 WRKY Transcription Factor Family AT4G12020 26.193 1.47e-55 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00457 - - vun:114165123 1243.8