Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00455 ATGGAATTCGACTCTTCAACTTCAAAACTCCCAGGGATGTACGATGTTCTCATCAACTTCACAGGAGAAGACATCCGAAGAAAATTTGTTTCTCATCTCGATTATGCTCTCTCTATTGCTGGGCTCACAACTTTCCTTCACGAGGAGAATGCAGTGAAGGGCAGGCAAATCCAACAACCTATTCTCAATCTGTGTCGGGTAGCAATTGTTGTTTTCTCCAAAACCTATTCTCAATCTGCTTGGTGTCTTCATCAGCTCCAACAAATCATCAAATGGCAAGAAACTTATTCCCGACATGTTCTGCCCATATATTACGAAATTCAGCCATCTGATGTACGTCTTCAGAAGGGTGATTTTGGTGAAGCCTTCAAAGCAACTGCACACAAAACATTCTCAAGACAACAACTGCAGCATGGCATGTCAAGGTGGAGCCACGCACTCACCAAAGCTGCAAATTTCTTTGGATGGGATGGGAGCAATTACAGGAGTGATGCTGAACTAGTGGACAAAATTGTTAAGAGCGTTCTTAATTTAGCAGTCTTGTCTGCTACTAATTTTCCAGTTGGATTACAATCCCGTATGGAAGAAGTGATTCAAATTATAAAAAATGAATCCAGGGATGTTTGCAGGATAGGGATATGTGGAATGGGAGGATCAGGTAAAACAACACTTGCGAAAGCCATCTATAATCAAATTCATGGTACATTCACAGATAAAATTTTCATTGAAGATGTTGCACAAGTTACTCAAACAAGAGGGCATGCTCATTTAAAAAAGCAACTTCTTTCTAGTGTTCTAAAAACAGATATACATAGCGTTAAGGGGACGAGAGGAAATATGATTCGAGAAAGGCTCAGGAAAAGGGTGCTCATTGTTCTTGACGATGTGGATGATCATTATTTTTCTTATTTAGAGGAGACTAGATAA 927 0.3991 MEFDSSTSKLPGMYDVLINFTGEDIRRKFVSHLDYALSIAGLTTFLHEENAVKGRQIQQPILNLCRVAIVVFSKTYSQSAWCLHQLQQIIKWQETYSRHVLPIYYEIQPSDVRLQKGDFGEAFKATAHKTFSRQQLQHGMSRWSHALTKAANFFGWDGSNYRSDAELVDKIVKSVLNLAVLSATNFPVGLQSRMEEVIQIIKNESRDVCRIGICGMGGSGKTTLAKAIYNQIHGTFTDKIFIEDVAQVTQTRGHAHLKKQLLSSVLKTDIHSVKGTRGNMIRERLRKRVLIVLDDVDDHYFSYLEETR 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00455 308 Gene3D - 12 174 IPR035897 -
Viun10g00455 308 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 299 IPR044974 GO:0006952
Viun10g00455 308 SMART till_3 13 153 IPR000157 GO:0007165
Viun10g00455 308 ProSiteProfiles TIR domain profile. 12 179 IPR000157 GO:0007165
Viun10g00455 308 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 156 IPR035897 -
Viun10g00455 308 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 299 IPR027417 -
Viun10g00455 308 PRINTS Disease resistance protein signature 210 225 - -
Viun10g00455 308 PRINTS Disease resistance protein signature 283 297 - -
Viun10g00455 308 Pfam NB-ARC domain 192 298 IPR002182 GO:0043531
Viun10g00455 308 Pfam TIR domain 14 177 IPR000157 GO:0007165
Viun10g00455 308 Gene3D - 175 306 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00455 Viun-Chr10 4129880 4132207 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00455 14 299 WRKY Transcription Factor Family AT4G12020 30.345 3.41e-33 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00455 - - vun:114165880 444.506