Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00447 ATGGGAGGATCGGGTAAAACAACCTTAGTCAAAGCCATCTACAATCGAACTTATCATCAATTCATTGGTAAGAGTTTTATTGAGAATATTAGTGAAGCTTGGGATTCAGAAAATGAAAGGTACGTTGATTTGCAAGAAAATCTTCTTTCTGATGTCCTAAAATCCAAGTTGGATGTGGAAAGCGTTGGGATGGGAAGAACATTGATCGAGAATAGACTTTCTCGGAAAAAGTTGTTCATTGTGCTTGATGATAGAAGCAATAATTCCCTTGAGCTTTTAAGTTGGCATGCTTTTAGAGAAGCAAAACCAAGAAAAGAATGGAATGACCTTGCAAGATGCATAGTTGATTATTGTAGAGGACTACCACTAGCTCTTCAGTCCCTTGGTTCCCATTTATTTGATAGGACAATAGAAGTGTGGAAAAGTCTATTGTCGAAACTAAAACAATTTCCCACGAATCAAGTTCAATCAGTATTAAAAATAAGTTTTGACGGTTTAAATGATACGGAAAAGGATATATTTCTTGATGTATGTTGTTTCTTTATTGGCAAACAAAGAAACTATGTCATAGATATATTAAATGGCTGTGGACTACGTGCTGACATTGGAATAACAATTCTGATCGAACGTGGCCTCATAAAAGTTGAAAGGAGCAACAAACTTGAAATGCATCCTTTGTTACGAGACATGGGAAGAGAAATTATTTGTCAAGAATGCCCAAAGGAACCGGGGAAAAGGAGTCGATTATGGTTTCAGGAAGACGTACAGGAAGTACTGAAAGAGAATACTGGAACAAAAGCTGTCGAGGGATTATCACTGAAACTGCATTCCAGCAGTAAAGATTGCTTGGAAGCTCATGCTTTCAAGGAAATGAAGAGACTAAGACTGCTACAACTTGATCATGTACAACTTAGTGGAGATTATGGGCACATTTCTAAACAACTGAGATGGATTTGTTGGCGAGGGTTTCCTTATAAATACATTCCAAACAACTTTCATTTGGAAAATGTAATTGCAATTGATTTCAAACATAGTCATCTCCAACTCCTCTGGGAACAACCCCTGGTGTTACAGCGATTAAAATTCCTTAATCTTAGTCACTCCAAGTTCTTGAGAGAAACACCCGACTTTTCAGGACTTCCAAGTCTTGAACAGCTCATTCTAAAAGATTGCGCATGGGCTTAG 1185 0.3755 MGGSGKTTLVKAIYNRTYHQFIGKSFIENISEAWDSENERYVDLQENLLSDVLKSKLDVESVGMGRTLIENRLSRKKLFIVLDDRSNNSLELLSWHAFREAKPRKEWNDLARCIVDYCRGLPLALQSLGSHLFDRTIEVWKSLLSKLKQFPTNQVQSVLKISFDGLNDTEKDIFLDVCCFFIGKQRNYVIDILNGCGLRADIGITILIERGLIKVERSNKLEMHPLLRDMGREIICQECPKEPGKRSRLWFQEDVQEVLKENTGTKAVEGLSLKLHSSSKDCLEAHAFKEMKRLRLLQLDHVQLSGDYGHISKQLRWICWRGFPYKYIPNNFHLENVIAIDFKHSHLQLLWEQPLVLQRLKFLNLSHSKFLRETPDFSGLPSLEQLILKDCAWA 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00447 394 Gene3D Ribonuclease Inhibitor 253 393 IPR032675 -
Viun10g00447 394 Gene3D - 85 167 IPR042197 -
Viun10g00447 394 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 86 IPR044974 GO:0006952
Viun10g00447 394 SUPERFAMILY "Winged helix" DNA-binding domain 154 260 IPR036390 -
Viun10g00447 394 SUPERFAMILY L domain-like 236 391 - -
Viun10g00447 394 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 176 IPR027417 -
Viun10g00447 394 Pfam NB-ARC domain 87 157 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00447 Viun-Chr10 4094310 4096984 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00447 1 392 WRKY Transcription Factor Family AT5G45050 28.817 1.02e-44 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00447 - - vun:114166985 803.127