Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00443 ATGGGCGACGGCGAAAGCACGTCCGATCGGTCGCTTAATTTCGAGGACATGACAGTGGTCTCCGCCGTGGGGCGCGGCGCCAAGGGCGTGGTGTTCTTGGCTCGCGCCGGTGGCGGCCGGTCGAGCGAGTGCGTGGCGCTGAAAGTGATGTCGAAGGCGCTGATTGCGCAGAAGAGAACGAGAAAGAACGAGGAGGAGTACGGGAGAGTGTCGTTTGAAGAGGAAGTGCTTCGTCGTTTCGATCACCCGCTCTTACCGAGGCTGAGAGGTGTTTTGGAAACGGAGAAAGTAGTTGCGTTCGCCATTGATTACTGCCATGGTGGCACGCTCCACTCTCTCAGGAAGAAACAGACTGAGAAAATGTTCTCCGATGACACCATCAGGTTTTACGCAGTGGAATTGGTGCTTGCATTGGAATATTTACACGAATTGGGAATAGTGTACAGAGATTTGAAGCCAGAAAATGTGATGATTCAAGAAAACGGCCACATAATGCTCGTCGATTTTGATCTCTCCAAAAAGCTAAACCCCAAGTCACCTCACTCACTGAGTCAAAACTCGACCCCGAGTCCTAACTCGGAGAAACGTTCAAGGAAACAACAACGATTGACTCGTATATACAGTTTCTGTAACTCCGGCATCTCGCCGTGGGACTCGGACTCGGAGCCCCCATTAAGTACCGTGGACTCAGTGCGTCGAACGGAGTCCGACTCGGTTGAGAAATCAAACTCGTTTGTTGGAACAGAGGAGTACGTGGCACCGGAAATCTTATCGGGGAAAGGTCACGGTTTTAGCGTGGATTGGTGGTCATACGGCATCTTGTTGTACGAGATGCTGTACGGAACGACGCCGTTTAAAGGCTCAAACAGAAAGGAAACGTTTTACCGGATCTTAACAAAAGAGCCAGAGTTAACGGGAGAGAAGACGGCGTTACGGGATTTAATTGCAAAATTGTTGGAAAAAGATCCTGAGCGTCGGATCTCGGTGGAGGAGATCAAAGGCCATGATTTCTTCAAAGGGGTTAAGTGGGACGAAGTGTTGCAAATTGCAAGACCACCTTATATTCCCGCAAATGAGGTTGAGAACAAAGTGGGGTTCAGCAAAAACGACGTGGAAGTGTTTGTGAACGAAGTGTTTTTTCCCACGAATGATGATGATGGCGTAGAGAATAACAAGAAGAATGACGATTTTTTAATTTTTTGA 1203 0.4896 MGDGESTSDRSLNFEDMTVVSAVGRGAKGVVFLARAGGGRSSECVALKVMSKALIAQKRTRKNEEEYGRVSFEEEVLRRFDHPLLPRLRGVLETEKVVAFAIDYCHGGTLHSLRKKQTEKMFSDDTIRFYAVELVLALEYLHELGIVYRDLKPENVMIQENGHIMLVDFDLSKKLNPKSPHSLSQNSTPSPNSEKRSRKQQRLTRIYSFCNSGISPWDSDSEPPLSTVDSVRRTESDSVEKSNSFVGTEEYVAPEILSGKGHGFSVDWWSYGILLYEMLYGTTPFKGSNRKETFYRILTKEPELTGEKTALRDLIAKLLEKDPERRISVEEIKGHDFFKGVKWDEVLQIARPPYIPANEVENKVGFSKNDVEVFVNEVFFPTNDDDGVENNKKNDDFLIF 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00443 400 Pfam Protein kinase domain 240 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g00443 400 Pfam Protein kinase domain 19 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g00443 400 MobiDBLite consensus disorder prediction 218 240 - -
Viun10g00443 400 MobiDBLite consensus disorder prediction 177 194 - -
Viun10g00443 400 FunFam Serine/threonine-protein kinase OXI1 109 177 - -
Viun10g00443 400 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Viun10g00443 400 MobiDBLite consensus disorder prediction 177 200 - -
Viun10g00443 400 ProSiteProfiles AGC-kinase C-terminal domain profile. 339 400 IPR000961 GO:0004674|GO:0005524|GO:0006468
Viun10g00443 400 Gene3D Transferase(Phosphotransferase) domain 1 238 370 - -
Viun10g00443 400 SMART serkin_6 17 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g00443 400 Gene3D Transferase(Phosphotransferase) domain 1 109 179 - -
Viun10g00443 400 MobiDBLite consensus disorder prediction 218 232 - -
Viun10g00443 400 FunFam Serine/threonine-protein kinase OXI1 240 357 - -
Viun10g00443 400 Gene3D Phosphorylase Kinase; domain 1 16 108 - -
Viun10g00443 400 PANTHER FLIPPASE KINASE 1-RELATED 10 363 - -
Viun10g00443 400 ProSiteProfiles Protein kinase domain profile. 17 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g00443 400 SUPERFAMILY Protein kinase-like (PK-like) 18 361 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00443 Viun-Chr10 4056581 4059577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00443 1 379 AGC Kinase Gene Family AT3G25250 58.594 2.30e-152 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Viun10g00443 Pkinase 3.1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00443 K20714 - gmx:100785773 629.402