Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00426 ATGGCTTCCCCTTTGCTTCCTTTTCTCTTCCTCTCAATGATTCTGTTACCCTTTCAACTCATCAGTGTTGCAGCCCAAACCAAAAACAGCTTAGTTATTGGTGATTCTCATACTGCAGGAAAAGCCACAACCCCATGGCTGGTTTCATCACCTTCTGGTGACTTTTCCTTTGGTTTCCTCCCACTTAAGGACTCTCCTGATAATTTCATACTTTGCATTTGGTATGCAAAGATTCAAACCAACACCATAGTTTGGTTTGCCAATAGGGACAACCCTTCACCAAAGGACTCAAAGGTGGAGCTTACAGCTAATGATGGGTTGGTGCTTACTGCCCCAAATGGTGACCGGTTATGGAATACTGCAACCAGTTTGAGAGTTTCTAAGGGTTCGTTTAATGACACTGGCAACTTAGTGCTTCAGGATGGTGACTCCAACAGTGCTTGGGAGAGTTTCAAGGATCATAGGAACACCTTACTGCCGTATCAGACTCTGGAAAGGGGCCAAAAGCTTTCTTCTATGCTTAGGGAGAACGATTTCAACAGGGGCAGGTTTGAGCTATTTTTCCAAAACGATGGTAATCTTGTGATGCGCTCTATAAATTTACCATCTGGGTATTCTAATGAAAACTACTATGAAAGTAGAACCTTCGAATCCAACACTTCTGGTGCTGGGACACAATTGGTGTTTGATAGCTCAGGAGATATGTATATTTTGAGAGCGAACAATGGAAGGTATAATTTGTCAGATGAAGGTGTTGGGGCATCTACCACTCAATTTTACCTTAGAGCAACTCTTGATTTTGATGGGGTGTTCACGCTCTATCAACATCCTAAGGGTTCTTCTGGCAGTGGAGGTTGGACCCCAGTGTGGTCTCATCCAGATAATATCTGTAAGAACTATCTTGCTGGTGCAAGTAGTGGTGTTTGTGGATATAATAGCATATGCAGTTTAAGAGAAGATAAGAGACCAACTTGTCAGTGTCCAAAATGGTACTCACTGGCTGACCCTAATGATCCCAACGGTAACTGCAAGCCAGATTTTATACAAGAATGTTTTGTAGATGATCTTAGTAACAGAAAGGATCTATATGATTTTGAGGTGTTGATAGATATTGATTGGCCTCTTTCAGATTATGAGCTTCAAAGACCCTTTAGTGAAAACCAATGCAAACAATCTTGTATGGAAGATTGTATGTGTTCTGTTGCCATTTTCAGGCTAGGTGACAGCTGCTGGAAGAAGAAGCTGCCACTTTCGAATGGTAGAGTTGATGCCGCGCTTAATGGTGGAAAGGCCTTCATGAAAGTGAGGAAGGACAATTTCTCCTTGACTAGTCCAACAACAATCGTTTTGAAGAACAACAGGAATACTTTGATTTTGGCTTTGTCAGTGCTTTTGGGTAGTTCTGCTTTGCTCAATCTCATATTAGTCTTTGCAATCTGCTTGAGCACTTCCTATGTTTTCCGGTACAAGAAGAAGCTCAGAAGAGTTGGCAAAACTGACACTACTGTGGAGACCAACTTGCGTTGCTTCACTTATGAGGAACTTGAAGAAGCCACTGAGGGCTTTGACAAAGTGCTAGGGAAGGGAGCTTTTGGCGTTGTGTATGAAGGAGTAGTCAACATAGGTTCCGTTACTCGTGTGGCTGTGAAAAGATTGAACACTTTTCTCTTGGAAGAGGTTCAGAAGGAGTTCAAGAATGAACTGAATGTCATTGGCCTCACACACCACAAGAACTTGGTTCGCTTACTTGGATTTTGTGAGACTGAATCAGAAAGGATACTTGTTTATGAGTACATGAGCAATGGCACTTTAGCAAGTCTTCTTTTTAATGTCGAGAAACCAAGTTGGAAATTGAGGCTACAAATTGCATCTGGGGTTGCTAGAGGACTTCTATATTTGCATGAAGAGTGCATCACACAGATTATCCATTGTGACATAAAGCCTCAGAACATACTCCTTGATGATTACTATGTTGCAAGAATTTCAGACTTTGGATTGGCCAAGCTTTTGAACATGAATCAGAGCAGAACCAACACTGCAATAAGGGGAACAAAAGGGTATGTTGCACTTGAATGGTTCAAAAACATGCCAATCACAGCTAAAGTGGATGTCTATAGTTATGGGGTGCTGTTGCTTGAGATAGTTTCATGCAGAAAAAGTGTGGAATTTGAGTTGGAAGATGAATCCAAAGCAATCCTAAGTGAATGGGCTTATGAGTGCTACTCTGAAGGTGCTCTTGATGCCTTGATTGAGGGTGATAAAGAGGCATTGGATGACATGAAGACAGTGGAGAAGTTGGTGATGATTGCTCTTTGGTGTGTGCAAGAGGATCCTGGTTTTAGACCAACCATGAGAAATGTGACACAGATGCTTGAAGGTGTTGTTGAAGTGGAAGTGCCACCATGCCCCTCACAAGTTAGTGTTCAATATTCCCTAAACTTCATGGCTTCACCTCTGTTTGCCTTTCTTCTTTGCTCAATGGTGCTGCTACACATCTTTGCAGTAGCCCAAACCAGAAGCAACAAAATCTTTGATCACTCTCTTCTGAATGAAACTAGCAAAGTCTCATGGGTAGTTTCACCTTCTGGTCAGATAAACCAGACCAGAAGAAACATAACCGTTGGTGATTCACTTTTTGCAGAAACAATTAGCAGCAACACCTCAACGTGGGTGGTTTCACCTCGTGGTCACTTTGCCTTTGGGTTTCTTCCACTTGAGAACACTAACCATTTCTTACTTTCCGTTTGGTATGCTAAGATTCCTGACATGACTGTTGTTTGGTATGCAAATGGAGACACTCCTGCTCCAAAGGGGTCAAAGGTTGAACTCACTGGTGATGATGGGTTAGTCCTCACCGCCCCAAATGGTGAACAGTTATGGAAAACTAAGAGTCTTGGTGGTAAAGTTTATCAAGGGTTTCTAAAGGACAATGGAAACTTTGTGCTTGTGGATGAGAATCATCAAGGTGCGTGGGAGACTTTTAAGCATCCAAGGGACACCTTGTTGCCCACACAAACTCTTGAAAAAGGTGAGAGGCTTTCATCAAGATTTCTAGAGGCAAATTACTCAGAAGGAAGGTTTGAGATGATGTTTCAAATGGATGGTATTCTTTCCATTCATGCTTTAAACTCACCCTCTGGGTATGCCAATGAAAACTACTACGAAAGTAGGACTGAAGAGTCCAACACATCAAGCCCTGGAACTCGTTTGGTGTTTGAACCATCTGGGTATGTGTATGTTTTAAGGAAGAACAGTGAGAAATACAACTTGTCAACATGGAGTGGAGCCTCTACTACTACTGACGAATCTTACTTCAGAGCAACTCTTAATTTTGATGGGGTGTTTACACTCTATCAACATTCAAAGAGTTCGTTTGGGAGTGGTGGTTGGAGTGCTATTTGGTCTCAGCCAGATAACATCTGTCTCAGCAGACTTGCCACTGAAGGTAGTGGTGTTTGCGGGTTTAACAGTGTTTGTACGTTGGGGAGTAATCAAAGGCCAAGTTGTCAATGCCCAAAATGGTACTCTTTGGTTGACCCTAATGACCCCTATGGTAGCTGCAAGCCAGATTTCATACAAGGATGTGCAGAAGATGAACTCATTGGAAATGCAGATGCAGCTGAATATGATTTTGAGGTGTTGGTAAACACAGATTGGCCTCTTTCAGATTATGTGCTTCTTAAGCCATTTACTGAAGAACAATGTGAACAGTCATGTTTGGAAGATTGTATGTGTGCAGTTGCCATCTACAAATCAGGTAGTGATTGCTTCAAGAAGAAGTTGCCTCTTTCAAATGGTAGAGTTGATGTTGGACTTAATGGTGCAAAGACTTTCATCAAGGTGAGGAAAGATAATTTCTCTTTGGTTGTTCCACAAGCCAGAGTGAATGAGAATAGTAAGAGCTCATTGAGTTTGGTTTCTTGGGTACTTTTTGGAAGCTCTTCATTTCTCAATGTCATATTCATTGGGGCCTTATGCATGTGTTCTTTCTACATCTTTCAGTACAAGAAGAAGCATAGAGGAATTGAAAAAAATGAGAATGCCCTTGAAACTAACTTGCGTTGCTTCGGTTATGAGGAGCTTGAAAGAGCTACAAATGGTTTTCAGAAAGAGTTAGGAAGAGGGTCTTTTGGTGTTGTTTACGAAGGAGTCATAAACATAGGCTCAGAAATTCCAATAGCAGTGAAAAAGTTGAACACTTTGCTTTTCCAACAGGTTGAGATGGAGTTCAAGAACGAGTTACATGTCATTGGTCTCACTCATCACAAGAACTTGGTGCGGTTGATAGGCTATTGTGAGGCTGAAAAGGAAAGATTGTTGGTTTATGAGTACATGAGCAATGGCACTTTGGCAAGTCTTGTTTTCAATGAGGTGAAACCTGAGTGGAAACTAAGGTTGGAGATTGCATTTGGGGTTGCTAGAGGACTTGCATATTTGCATGAAGAGTGCATCACTCAGATTATCCACTGTGACATAAAGCCACAAAACATACTCCTTGATGAGTACTACAATGCCAGGATTTCTGACTTTGGATTGGCCAAGCTCTTGAAGATGAACCAAAGCAGAACCAACACTGCCATAAGGGGAACAAAGGGGTATGTGGCACTTGAATGGTTTAAAAACATGGCTATCACAGCCAAAGTGGATGTGTACAGTTATGGTGTGTTGTTGCTTGAGATCATTTGCTGCAGAAGAAATGTGGAAATGGATCTGGAAGAGGAAGAGAAGGCTATATTAACTGATTGGGCTTGTGATTGCTACTCAAGAGGGACTTTTGATCCATTGGTTGAAGATGATAAAGAGGCATTGGATGACAAAATGAACATGAAGAAGTTGGTGATGATTTCCATTTGGTGTATTCAAGAGGATCCAAGTCATAGACCAACCATGAGAAAAGTGACACAGATGCTTGAAGGTGTCGTAGAAGTCCAACCTCCACCATTCCCCTCACAACTTAGTAGACATTCTCAAAATTCATGA 4980 0.4175 MASPLLPFLFLSMILLPFQLISVAAQTKNSLVIGDSHTAGKATTPWLVSSPSGDFSFGFLPLKDSPDNFILCIWYAKIQTNTIVWFANRDNPSPKDSKVELTANDGLVLTAPNGDRLWNTATSLRVSKGSFNDTGNLVLQDGDSNSAWESFKDHRNTLLPYQTLERGQKLSSMLRENDFNRGRFELFFQNDGNLVMRSINLPSGYSNENYYESRTFESNTSGAGTQLVFDSSGDMYILRANNGRYNLSDEGVGASTTQFYLRATLDFDGVFTLYQHPKGSSGSGGWTPVWSHPDNICKNYLAGASSGVCGYNSICSLREDKRPTCQCPKWYSLADPNDPNGNCKPDFIQECFVDDLSNRKDLYDFEVLIDIDWPLSDYELQRPFSENQCKQSCMEDCMCSVAIFRLGDSCWKKKLPLSNGRVDAALNGGKAFMKVRKDNFSLTSPTTIVLKNNRNTLILALSVLLGSSALLNLILVFAICLSTSYVFRYKKKLRRVGKTDTTVETNLRCFTYEELEEATEGFDKVLGKGAFGVVYEGVVNIGSVTRVAVKRLNTFLLEEVQKEFKNELNVIGLTHHKNLVRLLGFCETESERILVYEYMSNGTLASLLFNVEKPSWKLRLQIASGVARGLLYLHEECITQIIHCDIKPQNILLDDYYVARISDFGLAKLLNMNQSRTNTAIRGTKGYVALEWFKNMPITAKVDVYSYGVLLLEIVSCRKSVEFELEDESKAILSEWAYECYSEGALDALIEGDKEALDDMKTVEKLVMIALWCVQEDPGFRPTMRNVTQMLEGVVEVEVPPCPSQVSVQYSLNFMASPLFAFLLCSMVLLHIFAVAQTRSNKIFDHSLLNETSKVSWVVSPSGQINQTRRNITVGDSLFAETISSNTSTWVVSPRGHFAFGFLPLENTNHFLLSVWYAKIPDMTVVWYANGDTPAPKGSKVELTGDDGLVLTAPNGEQLWKTKSLGGKVYQGFLKDNGNFVLVDENHQGAWETFKHPRDTLLPTQTLEKGERLSSRFLEANYSEGRFEMMFQMDGILSIHALNSPSGYANENYYESRTEESNTSSPGTRLVFEPSGYVYVLRKNSEKYNLSTWSGASTTTDESYFRATLNFDGVFTLYQHSKSSFGSGGWSAIWSQPDNICLSRLATEGSGVCGFNSVCTLGSNQRPSCQCPKWYSLVDPNDPYGSCKPDFIQGCAEDELIGNADAAEYDFEVLVNTDWPLSDYVLLKPFTEEQCEQSCLEDCMCAVAIYKSGSDCFKKKLPLSNGRVDVGLNGAKTFIKVRKDNFSLVVPQARVNENSKSSLSLVSWVLFGSSSFLNVIFIGALCMCSFYIFQYKKKHRGIEKNENALETNLRCFGYEELERATNGFQKELGRGSFGVVYEGVINIGSEIPIAVKKLNTLLFQQVEMEFKNELHVIGLTHHKNLVRLIGYCEAEKERLLVYEYMSNGTLASLVFNEVKPEWKLRLEIAFGVARGLAYLHEECITQIIHCDIKPQNILLDEYYNARISDFGLAKLLKMNQSRTNTAIRGTKGYVALEWFKNMAITAKVDVYSYGVLLLEIICCRRNVEMDLEEEEKAILTDWACDCYSRGTFDPLVEDDKEALDDKMNMKKLVMISIWCIQEDPSHRPTMRKVTQMLEGVVEVQPPPFPSQLSRHSQNS 1659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00426 1659 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1445 1645 - -
Viun10g00426 1659 FunFam S-receptor-like serine/threonine-protein kinase 1335 1444 - -
Viun10g00426 1659 CDD B_lectin 881 997 IPR001480 -
Viun10g00426 1659 ProSiteProfiles Protein kinase domain profile. 1366 1641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g00426 1659 Pfam D-mannose binding lectin 82 167 IPR001480 -
Viun10g00426 1659 Pfam D-mannose binding lectin 924 1008 IPR001480 -
Viun10g00426 1659 Gene3D Transferase(Phosphotransferase) domain 1 1445 1648 - -
Viun10g00426 1659 ProSiteProfiles Protein kinase domain profile. 520 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g00426 1659 SUPERFAMILY Protein kinase-like (PK-like) 507 813 IPR011009 -
Viun10g00426 1659 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 197 IPR036426 -
Viun10g00426 1659 FunFam Serine/threonine-protein kinase 998 1144 - -
Viun10g00426 1659 Gene3D Phosphorylase Kinase; domain 1 1338 1444 - -
Viun10g00426 1659 Gene3D Phosphorylase Kinase; domain 1 494 598 - -
Viun10g00426 1659 ProSiteProfiles Bulb-type lectin domain profile. 38 152 IPR001480 -
Viun10g00426 1659 ProSitePatterns Protein kinases ATP-binding region signature. 526 550 IPR017441 GO:0005524
Viun10g00426 1659 Gene3D - 24 153 IPR036426 -
Viun10g00426 1659 Gene3D - 873 996 IPR036426 -
Viun10g00426 1659 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 38 804 - -
Viun10g00426 1659 Pfam Protein tyrosine and serine/threonine kinase 522 791 IPR001245 GO:0004672|GO:0006468
Viun10g00426 1659 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 25 152 - -
Viun10g00426 1659 ProSiteProfiles Bulb-type lectin domain profile. 875 995 IPR001480 -
Viun10g00426 1659 Gene3D - 154 281 IPR036426 -
Viun10g00426 1659 Pfam Protein kinase domain 1369 1635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g00426 1659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1487 1499 IPR008271 GO:0004672|GO:0006468
Viun10g00426 1659 SUPERFAMILY alpha-D-mannose-specific plant lectins 924 1049 IPR036426 -
Viun10g00426 1659 ProSitePatterns Protein kinases ATP-binding region signature. 1372 1397 IPR017441 GO:0005524
Viun10g00426 1659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 641 653 IPR008271 GO:0004672|GO:0006468
Viun10g00426 1659 Gene3D Transferase(Phosphotransferase) domain 1 599 798 - -
Viun10g00426 1659 FunFam S-receptor-like serine/threonine-protein kinase 490 598 - -
Viun10g00426 1659 SUPERFAMILY Protein kinase-like (PK-like) 1353 1652 IPR011009 -
Viun10g00426 1659 FunFam Serine/threonine-protein kinase 155 300 - -
Viun10g00426 1659 Gene3D - 998 1139 IPR036426 -
Viun10g00426 1659 SMART blect_4 880 997 IPR001480 -
Viun10g00426 1659 SMART blect_4 28 154 IPR001480 -
Viun10g00426 1659 SMART serkin_6 1366 1637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g00426 1659 SMART serkin_6 520 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g00426 1659 CDD B_lectin 47 151 IPR001480 -
Viun10g00426 1659 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 599 799 - -
Viun10g00426 1659 CDD STKc_IRAK 526 793 - -
Viun10g00426 1659 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 866 995 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00426 Viun-Chr10 3711359 3719806 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00426 506 793 Receptor kinase-like Gene Family AT1G60800 42.857 2.00e-68 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Viun10g00426 Pkinase 2.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00426 - - vra:106773297 3046.91