Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00415 ATGGATTTGGAAGCTGTGGCAGAAACAGTTGTAAATTCTACAGATCAAATATCAGCAGCACTTGAAGGCAATTCTATTGGGGAGCCAAATGTTGGTATGGAGTTTGAGTCAGAGGAAGCTGCTAAGAACTTTTATGACGAATATGCAAAACATGAAGGGTTTGTTGTTCGCCTTGATCGTTGCCATCGTTCTGAGGTTGACAACCGAATCATTTCACGCCGTTTTTCGTGCAATAAGCAAGGTTTTCATGTGAGGGTTAGAAATAAAACCAAGCCTGTTCATAAACCAAGGACTAGCATAAGAGAAGGTTGTGAAGCCATGATGTTGGTTAAAGTTAATAAATTTGGGAAGTGGGTGGTTACTAAATTTGTGAAGGAGCACAGTCATCTGCTAAATGCTTCTGGTTCTCGTTCATATAGTAAAATGATTGAATCAAAGGATAGGATAATTCAACAACTCACAAAGGAACTTGAGTACCGAGATCGATTATGTCAGCAATATCGCAGACAGCTATTCTCCCTTCTGGAGACTGTTGAGGAACAAACGGAAAGTTTATCAAAAAATGTTGAGCTTGTTGTTAACAATATAAAAAATCTTTAG 600 0.385 MDLEAVAETVVNSTDQISAALEGNSIGEPNVGMEFESEEAAKNFYDEYAKHEGFVVRLDRCHRSEVDNRIISRRFSCNKQGFHVRVRNKTKPVHKPRTSIREGCEAMMLVKVNKFGKWVVTKFVKEHSHLLNASGSRSYSKMIESKDRIIQQLTKELEYRDRLCQQYRRQLFSLLETVEEQTESLSKNVELVVNNIKNL 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00415 199 Coils Coil 175 195 - -
Viun10g00415 199 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 17 195 - -
Viun10g00415 199 Pfam FAR1 DNA-binding domain 43 132 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00415 Viun-Chr10 3643158 3645984 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun10g00415 FAR1 5.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00415 - - var:108347130 379.022