LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun10g00406	ATGGCTTCTCGGGCTTCGATGTTCTCTAGACGATTCCCCCCTCTGCCTATCGGGCTCTCGTTCTCGTCGCCTCTCCCACTTCGCTGGACCTTGCCTTCAGACCTAGCTCCTGTTCCTGGCTGGGCTTCGTTGGGGGCGATCTTGCCGGATGTATTTCTTAAGGTGCCCCTGGCGGATCAGCTCCTTTATCTTATCCCAGAGCGTGTGGCATTCTTCAGTGGTATGGCCGATCGTCCGATGATACTGACAGTGCTTGCTGCCATCGGCGTCGGGGAGAAGCAAGATTCTTGGCAAGACCAAGTAGTAAACATAAGACAACCAGATATCAGTAATTGTAATAAGAACTCTGCTCGTGGATTTGAAGTGATCGACAAAATGAAATCGGCTGTGGAAGAAGTGTGCCCGGGTATAGTCTCATGCGCTGATATCTTGGCTCTAGCTGCAAGAGATTCAATTCAAATCATTTCTTGTGATGCACCTGTTTCCCAGGCTCTGGAATCGAACAAAACCATTTGTAATGAACCGTTGGGAAAAAGACTAGCAGTGATTCAGGTTCAACAGTTGTTTCTGTGGCTCCTCCATTAA	585	0.4906	MASRASMFSRRFPPLPIGLSFSSPLPLRWTLPSDLAPVPGWASLGAILPDVFLKVPLADQLLYLIPERVAFFSGMADRPMILTVLAAIGVGEKQDSWQDQVVNIRQPDISNCNKNSARGFEVIDKMKSAVEEVCPGIVSCADILALAARDSIQIISCDAPVSQALESNKTICNEPLGKRLAVIQVQQLFLWLLH	194

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun10g00406	194	PRINTS	Plant peroxidase signature	118	131	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Viun10g00406	194	PRINTS	Plant peroxidase signature	137	147	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Viun10g00406	194	PANTHER	PEROXIDASE 72-RELATED	109	153	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Viun10g00406	194	Gene3D	-	94	186	-	-
	Viun10g00406	194	SUPERFAMILY	Heme-dependent peroxidases	111	155	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Viun10g00406	194	Pfam	Peroxidase	113	155	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Viun10g00406	194	ProSiteProfiles	Plant heme peroxidase family profile.	113	179	IPR002016	GO:0004601\|GO:0006979\|GO:0020037

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun10g00406	Viun-Chr10	3530106	3534919	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Viun10g00406	113	152	Peroxidase	AT5G05340	77.500	7.13e-16	72.4

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun10g00406	K00430		-	gmx:100803637	78.9517