Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00403 ATGGTCAAAGACAACAAGGGTTTGGTCATAGGAATCGACCTTGGCACAACTTACTCGTGTGTTGCAGTGTGGCAGCAACAAAATAATAGAGTGGAGATCATCCATAACGACCAAGGCAACAACACCACTCCTTCCTGTGTTGCTTTCACCGACCATCAAAGATTGATAGGAGATGCTGCTAAGAATCAAGCTGCTGCCAATCCGGAAAACACCATCTTCGATGCTAAGAGGTTGATCGGTAGAAAATATAGTGACCCTCTTGTTCAAAAAGATAAAATGTTATGGCCATTTAAGGTTGTTGCTGGTGTTAATGACAAACCTATGATTTCTGTCAAGTACAAGGGTCAAAAGAAGAAACTTTGTGCAGAGGAAGTATTATCCATGGTCCTGTCAAAGATGCGGGACATTGCTGAGGCATATTTAGAACAACCTGTGAAGAGTGCAGTGATTACTGTACCTGCCTATTTTAATGATTCTCAGCGCAGTTCCACCACTGATGCAGGTGATATTATAGGCTTGAATGTTATTCGTATAATTAATGAGCCGACAGCTGCAGCAATCGCATATGGTCTTGATAAGAGGAACGATTGTGTTGGAAAGCGAAATATTTTTGTTTTTGATTTTGGAGGTGGTACATTCGATGTGTCTCTCCTTACTATCTCAAACAAAGTCTTCCAAGTTAAGGCCACCGGAGGAAACACTCACCTTGGCGGAGAGGACATTGATAACAAAATGGTGAAGTACTTTTTAGAGGAAATGAAAAGAAAAAATAAGGTGGACTTAAGTGGGAATCCACGAGCCCTAAGGAGGTTGAAAAATGCATGCGAGAGGGTAAAAAGGACTCTCTCATGTGTTGTTACTACAGACATTGAGGTAGATTGCTTGTTTCAAGGCATTGATTTCCGTTCTTCAATCAGCCGAGCAAAATTTGAAGAAATCAATATGGACATCTTTGAAGAGTGTATGGAAACAGTAGATAGGTGTCTTAGGGATGCTAATATGGACAAAAACAATGTGCATGATATTGTCCTTGTTGGTGGTTCTTCTAGGATTCCTAAAGTGCAAGAGCTACTACAACACTTCTTCAACGGAAAAGATCTTTGCCATAGCCTAAACCCTGATGAGGCGGTTGCTTATGGTGCAGCTGTGCAGGCTGCTTTGTTGAGTGGAGGCATTAAGAATGTTCCAGATTTGGTATTGAAAGATGTTACTCCACTCTCACTTGGTGTATTAGTAAGTGAAGATGTCATGAGTGTTGTGATTCCTAGAAACACTTCTATCCCTGTAAAGAAGAAAAAACAATATAAAACGACAATAGATAACCAATCCTTAGTCTCTATTAATGTTTATGAGGGTGAGAGAGCGAGGGCCAGCGATAATAATTTGTTGGGTTCTTTTGTTATTTCTGGTTTTCCTCCCGCTCCTCGTGGCTATCTATTTGATGTGACTTTTGTGCTAAATGATAATGGCATTCTCACCGTTACTGGTGAGGAGAAATCCACTGGTAATAGGAATGAAATTACAATAACCAATGTCAAAGGAAGACTATCTACTGCTGAGATTAATATAATGATTCAAGAAGCAGCGAAGTACAAGTCTGAAGATGAGAAGTTTCTTAAGAAGGCCAAGACAATGAATGATTTGGATTATCATATTTACAAGATCAGAAAGGACTTAAAGAAAGAGGACATAAGCTCAAAGTTAAGCTCAAAAGAAATGGAAGATATCAACTTTACAATTTCTAGAGCCACCGATATGCTTGATGGTTTGATCAAAATTGAAGATATCATTGCTCTTGAAGACTGTCTGAAAGAGCTTAAAGCAATCTTTAAACGAATTACGGTCATGGAGAAGGTTGAGTAG 1863 0.3945 MVKDNKGLVIGIDLGTTYSCVAVWQQQNNRVEIIHNDQGNNTTPSCVAFTDHQRLIGDAAKNQAAANPENTIFDAKRLIGRKYSDPLVQKDKMLWPFKVVAGVNDKPMISVKYKGQKKKLCAEEVLSMVLSKMRDIAEAYLEQPVKSAVITVPAYFNDSQRSSTTDAGDIIGLNVIRIINEPTAAAIAYGLDKRNDCVGKRNIFVFDFGGGTFDVSLLTISNKVFQVKATGGNTHLGGEDIDNKMVKYFLEEMKRKNKVDLSGNPRALRRLKNACERVKRTLSCVVTTDIEVDCLFQGIDFRSSISRAKFEEINMDIFEECMETVDRCLRDANMDKNNVHDIVLVGGSSRIPKVQELLQHFFNGKDLCHSLNPDEAVAYGAAVQAALLSGGIKNVPDLVLKDVTPLSLGVLVSEDVMSVVIPRNTSIPVKKKKQYKTTIDNQSLVSINVYEGERARASDNNLLGSFVISGFPPAPRGYLFDVTFVLNDNGILTVTGEEKSTGNRNEITITNVKGRLSTAEINIMIQEAAKYKSEDEKFLKKAKTMNDLDYHIYKIRKDLKKEDISSKLSSKEMEDINFTISRATDMLDGLIKIEDIIALEDCLKELKAIFKRITVMEKVE 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00403 620 Gene3D - 194 368 - -
Viun10g00403 620 FunFam Heat shock protein 70 10 200 - -
Viun10g00403 620 SUPERFAMILY Actin-like ATPase domain 8 193 IPR043129 -
Viun10g00403 620 Gene3D - 73 128 - -
Viun10g00403 620 Gene3D - 516 618 IPR029048 -
Viun10g00403 620 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Viun10g00403 620 Gene3D Actin; Chain A, domain 4 237 320 - -
Viun10g00403 620 FunFam heat shock 70 kDa protein-like 73 128 - -
Viun10g00403 620 FunFam Heat shock 70 kDa protein 392 545 - -
Viun10g00403 620 FunFam Heat shock 70 kDa 237 320 - -
Viun10g00403 620 Gene3D - 10 384 - -
Viun10g00403 620 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Viun10g00403 620 SUPERFAMILY Actin-like ATPase domain 200 390 IPR043129 -
Viun10g00403 620 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 394 548 IPR029047 -
Viun10g00403 620 Pfam Hsp70 protein 9 613 IPR013126 GO:0005524|GO:0140662
Viun10g00403 620 PRINTS 70kDa heat shock protein signature 8 21 - -
Viun10g00403 620 PRINTS 70kDa heat shock protein signature 339 355 - -
Viun10g00403 620 PRINTS 70kDa heat shock protein signature 371 391 - -
Viun10g00403 620 PRINTS 70kDa heat shock protein signature 211 221 - -
Viun10g00403 620 PRINTS 70kDa heat shock protein signature 397 416 - -
Viun10g00403 620 PRINTS 70kDa heat shock protein signature 477 493 - -
Viun10g00403 620 PRINTS 70kDa heat shock protein signature 38 50 - -
Viun10g00403 620 PRINTS 70kDa heat shock protein signature 60 68 - -
Viun10g00403 620 PRINTS 70kDa heat shock protein signature 148 168 - -
Viun10g00403 620 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 385 514 IPR029047 -
Viun10g00403 620 ProSitePatterns Heat shock hsp70 proteins family signature 3. 342 356 IPR018181 -
Viun10g00403 620 PANTHER HEAT SHOCK PROTEIN 70KDA 9 567 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00403 Viun-Chr10 3454748 3456716 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00403 1 609 Calmodulin-binding Proteins AT3G12580 63.339 0.0 789
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00403 K03283 - gmx:102667578 911.753