Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun10g00295 | ATGAGGATTGTAGGATTGGGTTTTCGCCCCACAGATGAAGAACTCGTCGACTTCTACCTCAAACACAGATTGCTCGGTGATGATCCCCGTGTTCGCGTCATGACTGACATAGATCTTTGCGATGTTGAACCTTGGGAAGTACCAGTGATGTTAGCAAAATCAGTAATACCATTCAAAGACCGAGAATGGTGTTTCTTCAGTCCTGTTAAATTGATGTCCTCAAATAGTAAAAGGTTTATCAGGAGAACCAAGTCTGGGTTCTGGAAACCCACTGGAAAAGACCGTGATGTTAGAAGCAGGGACACCAACACTGTCATTGGGACTAAGAAGACTCTTGTTTTCAAATATGGTCGTGCTTCCAAAGGTGTCAATTCCGACTGGTTTATTTACGAATATCATGCTCTTAACTTTCTTGAAAGCCAGAATCAGTAG | 432 | 0.4259 | MRIVGLGFRPTDEELVDFYLKHRLLGDDPRVRVMTDIDLCDVEPWEVPVMLAKSVIPFKDREWCFFSPVKLMSSNSKRFIRRTKSGFWKPTGKDRDVRSRDTNTVIGTKKTLVFKYGRASKGVNSDWFIYEYHALNFLESQNQ | 143 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun10g00295 | 143 | Gene3D | NAC domain | 11 | 143 | IPR036093 | GO:0003677|GO:0006355 | |
Viun10g00295 | 143 | PANTHER | NAC DOMAIN-CONTAINING PROTEIN 82-RELATED | 5 | 134 | - | - | |
Viun10g00295 | 143 | Pfam | No apical meristem (NAM) protein | 5 | 133 | IPR003441 | GO:0003677|GO:0006355 | |
Viun10g00295 | 143 | ProSiteProfiles | NAC domain profile. | 2 | 143 | IPR003441 | GO:0003677|GO:0006355 | |
Viun10g00295 | 143 | SUPERFAMILY | NAC domain | 4 | 136 | IPR036093 | GO:0003677|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun10g00295 | Viun-Chr10 | 2401258 | 2417694 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun10g00295 | 4 | 134 | NAC Transcription Factor Family | AT3G49530 | 47.328 | 4.67e-36 | 126 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NAC | Viun10g00295 | NAM | 4.3e-25 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun10g00295 | - | - | vra:106778154 | 232.261 |