Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00291 ATGGATGTTATAGGATTCGGTTTTCGTCCCACGGAAGAAGAACTTGTGGACTATTACCTCAGACATAGGTTGCTCGGTAATGATCCACAAGGCCACGTCATCCCCGACATTGACCTTTGTCAAGTGGAACCTTGGGACGTGCCAATGTATTTCGAGGAATCAGATGCACAATTCGATTTCCCAGAATGGTTTTTCTTTAGTCCTGTTGATTTCAAGTATCCAAACAGTAAAAGGATTAACCGGACAACCAAGTGTGGCTTCTGGAAACCCACCGGAAAAGATCGTGAGATTAGAAGCTCCGACTCCAACACTCTCATTGCCACAAAGAAGACTCTTGTTTACTACAAAGGTCGCGTTTCACGTGGTCAGAAATCCAACTGGGTTATTCACGAATACCATGCTGTCACCTTTCACCAAAGCCAGAGGACTTTTGTTTTGTGTCGTCTGATGAAGAAACCTGGGGGAACAACTGAAGGTGGGAGTGATGAAGGGGAGAGCAGTAGAATCATGGTTTCTGGCTATCAGAATCACTCAATAGGAACCACCTTTCAGCAAGACCAAACGTCTTTTCCAAACCCCTCATTTTACGATGCCTATTTTAGAAATGAATCTAACATTGAGCACAATTCATATGAAAATACCCAGGAACAGGAATTCGTGAATTCTTTTCTTGTTCAGGACAATTATATTAACAATGAAGAAAGTACAAATACCTACTTCAATACTTTCACCCAATCGGAGTCATTGAGAAAGGTATATGATACAGATGCCGAGGCCGTCTCTCAACAGGTAAACATATGTTGTCCAAATTTTTCCAATCATACAGTGAGCATCTCCATCTGTTTCTGA 849 0.4205 MDVIGFGFRPTEEELVDYYLRHRLLGNDPQGHVIPDIDLCQVEPWDVPMYFEESDAQFDFPEWFFFSPVDFKYPNSKRINRTTKCGFWKPTGKDREIRSSDSNTLIATKKTLVYYKGRVSRGQKSNWVIHEYHAVTFHQSQRTFVLCRLMKKPGGTTEGGSDEGESSRIMVSGYQNHSIGTTFQQDQTSFPNPSFYDAYFRNESNIEHNSYENTQEQEFVNSFLVQDNYINNEESTNTYFNTFTQSESLRKVYDTDAEAVSQQVNICCPNFSNHTVSISICF 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00291 282 Gene3D NAC domain 11 154 IPR036093 GO:0003677|GO:0006355
Viun10g00291 282 ProSiteProfiles NAC domain profile. 2 152 IPR003441 GO:0003677|GO:0006355
Viun10g00291 282 Pfam No apical meristem (NAM) protein 5 133 IPR003441 GO:0003677|GO:0006355
Viun10g00291 282 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 207 - -
Viun10g00291 282 SUPERFAMILY NAC domain 4 152 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00291 Viun-Chr10 2396767 2398655 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00291 4 164 NAC Transcription Factor Family AT4G35580 49.701 5.24e-48 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Viun10g00291 NAM 2.5e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00291 - - vun:114166939 586.645