Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00275 ATGAACCCTTCTTCTTCTTCTTCTTGTTCCCTTTTGTTCACTCTCACAATCATCTTTTGTTCTCTCCATTCTCTAGGGTTTGCCAACCGTCTCATCCAACAAACATGCAAGAATTGCTCAAAAACCGACCCAAACATAAGCTACAACTTCTGTGTAGCATCCTTCGAATCCAACCATAGGAGCCAACATGCGAAAAACCTGGAAGAACTAGGTTTAATCTCCATCAAGATTACAAGGCACAATGTGTCGGATACTAATGCTCACATCAATGATCTTTTGGAGAAGAACAAGAGCTTAGGCCCATTCATGAAAGAATGCTTAGATGATTGCCTTGAAGTCTATTCCGACACCATTTCCACTTTCAGAGAAGCCATTAGAGATTACAAGGCCAAACGCTATTCCGATTGCAACGTGAAACTAAGCTCAATCATCGATGCCTCTACCACCTGTGAAGATGGATTCAAGCAGAAGAACAATGGCGTCGTTTCTCCACTCACAAAAAGAAACAAAGATACCTTTCAACTTTCTGCTATTGCACTTTCCATTGTTAACATGCTCATCAATTCGGATCTATAA 576 0.408 MNPSSSSSCSLLFTLTIIFCSLHSLGFANRLIQQTCKNCSKTDPNISYNFCVASFESNHRSQHAKNLEELGLISIKITRHNVSDTNAHINDLLEKNKSLGPFMKECLDDCLEVYSDTISTFREAIRDYKAKRYSDCNVKLSSIIDASTTCEDGFKQKNNGVVSPLTKRNKDTFQLSAIALSIVNMLINSDL 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00275 191 PANTHER OS02G0537100 PROTEIN 12 186 - -
Viun10g00275 191 Pfam Plant invertase/pectin methylesterase inhibitor 31 182 IPR006501 GO:0004857
Viun10g00275 191 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 187 IPR035513 -
Viun10g00275 191 CDD PMEI-Pla_a_1_like 36 185 IPR034088 -
Viun10g00275 191 SMART PMEI_2 27 182 IPR006501 GO:0004857
Viun10g00275 191 FunFam Putative invertase inhibitor 27 186 - -
Viun10g00275 191 NCBIfam pectinesterase inhibitor domain 10 186 IPR006501 GO:0004857
Viun10g00275 191 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 186 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00275 Viun-Chr10 2122921 2123590 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00275 74 191 Carbohydrate Esterase AT3G14310 26.562 9.03e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00275 - - gmx:100306248 312.768