Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun10g00248 | ATGGATGAATCATGGGAAAAATGGTTTTCTAATTTGGAAATGGGTGATGATGAGTTTCATGTGTTCAATGAACACGACATGATGATATCTCTTGAGGAAGAATTGATGAAGGGAGAGAGTTCAGTGCCTCATGATTCGGATTCTGCTATCAACAACGACAACAACAACATGGGCACTGACTCCACTGTGGTTTCAAATGTTGCTGATGAATCGTTCCATGCAAAAACTGAGAAGAGAAGAAGCAATTTTCAGGCGCAACAGCACATAATGGCAGAGAAGAAGAGGAGAGAGAAACTCAGCACTATGTTCGTAGAACTTTCAACCATGGTTCCTGGTTTGAAAAAGGTTGGATCAAGATATGTGTCATTTGGAGATGCTTCAAAGGCTGTAGCAAACGGTCGAGACACAATTTTGTACTTGCAAAAGGATGGTTGA | 435 | 0.4092 | MDESWEKWFSNLEMGDDEFHVFNEHDMMISLEEELMKGESSVPHDSDSAINNDNNNMGTDSTVVSNVADESFHAKTEKRRSNFQAQQHIMAEKKRREKLSTMFVELSTMVPGLKKVGSRYVSFGDASKAVANGRDTILYLQKDG | 144 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun10g00248 | 144 | MobiDBLite | consensus disorder prediction | 44 | 62 | - | - | |
Viun10g00248 | 144 | Gene3D | - | 69 | 143 | IPR036638 | GO:0046983 | |
Viun10g00248 | 144 | PANTHER | BHLH TRANSCRIPTION FACTOR | 34 | 119 | - | - | |
Viun10g00248 | 144 | MobiDBLite | consensus disorder prediction | 40 | 62 | - | - | |
Viun10g00248 | 144 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 77 | 114 | IPR036638 | GO:0046983 | |
Viun10g00248 | 144 | Pfam | Helix-loop-helix DNA-binding domain | 86 | 113 | IPR011598 | GO:0046983 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun10g00248 | Viun-Chr10 | 1840127 | 1842306 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun10g00248 | 80 | 137 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT2G22750 | 48.276 | 1.35e-10 | 56.2 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bHLH | Viun10g00248 | HLH | 3.5e-05 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun10g00248 | - | - | vun:114166929 | 285.034 |