Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00241 ATGTCCTTCAATCAATCAAAGGTGGAAAAGAACGACGTCGTTTACAGAAGAAACGGACGATCCTCCACCTTTAACCAGCAAAGAGGTTCCTACGGCAAAGCTGGTGGCGATGGCGGTGGAATCGCGCCGTCAAACAATTCGTTATCCACTGCCCGAAGTTTTAACAAGAAGTCTAATAATGCACAAGGTGGGCAATCTAGGCTAAATCCTTCCCAGGGAAATTCAACGGAGTCAAATAATGCATCTGCTGCCCGGATCATTAGTAATGGTATCCACTTACATGGTGCACCAGATGGACCAATTACAAAGTCATCTGAATCATCAGCTGGGCATAAGAGCACTGGAATTGTTCCAAAGGCTGAAACTGCTTCATTGCCCCCTTTAATTTCTGATCCAGTACTTCCCACAAGCCTTGCTAAGGGAGATGATGAGTCTAAGGCATTCCCCTTTCAATTTGGATCCATTGTTCCTGGTGTCATTAATGGGATGGCAATTCCTGCTCGTACAAGTTCAGCTCCTCCTAGTTTTGATAAGCAGAAGCCTGATCAGGCTCTTGATGACTCTGACAAATCTGTGTCTTCGGATCCAATTCCTCCTGTTCCAAAGCAGCAGAATTCACATGAGAAAGATGCTGGTGTCAATGAGCAATCTAACATTGAGGAGATTAAGGCAAACAAGGATTCTGAGGTGTCAAATTTAACCTCAGTAAATCAGATCTCAAAACCCTTTGTTGCTCCTGTAACTGGGATTTCAATGTCAACTTCATATCACCAATCACAGGCTCCTTTACAGTTTGGAGGTGCTAATCCACAGATTCAATCTCAGGGCATGACAACAACGTCCATCCAAATGCCTATACCGATGCCTTTACCAATTGGTAATGCTACACAAGTGCAACAGCCGGTTTTTATTCCAGGTCTTCAACCTCATCCAATGCATCCTCAAGGGATCATGCATCAAGGCCAAAACATTAGTTATTCTCCTCAAATGGGTAATCAATTAGGCAACATGGGCATTGGCATAGGTTGTCAATATCCACAACAGCAAGGAGGAAAATTTGCTGGTCCTCGGAAAACTACCCATGTAAAGATAACTCATCCTGAGACACATGAAGAGTTAAGACTTGATAAAAGGATGGATGCATACTCAAATGGTGGGTCATCTGGTGTTAGGCCACATCCTATCATACCTTCTCAATCCCAGCCTGTTAAATCTTTTCCGGCTTCTCATCCTATGAACTATTTTTCATCCAACTCGTATAATACAAATTCTCCTTATTATCCACCTAATTCTCTCCCATTAACAAGTGGCCCAATGACTCCTAATTGTCAACCACCAACATTTAATTTTCCTCTGCACCATGGTCCGCAAGGTGTGAGTTTTATGAATTTATCTTCACAAGGTTCCTTGCCTACTAATAAAACTAGCACTCCAACAGGGATTACATCTATGACCATTAAGCCTAATGGTACAACTACTATAGTGGACTCATCCTTGTCGAATTCCTGTATTGCTGATGTTCAAAATGGAGAATCCCCTGGTTCAACAATATCTTCGGAAACTTTTTCAGAAGTTTCTCCACAACGAGCTAAGTTTTCTAGTGATTTTGTCGCAGATGTGTCTAGTAATGAAGGTGGAAGGGAATCTCTCGGTATCTCCAACTCTTTGAAGGACAAAAATCCAGGGAAGAAAGATCAAATATCACAAAATCAGGTTTCTGTACGATCTCCCACAATGGACACTATACTTTCTGGAGTTGTTGATCAAGATATATCTGATGTTGGACTGTCCAATGCTTTAGGAATTAAAAAAAATAATTCTGCAGCAATTACTATTGAAGATCTTCCAAGATCTGATACAACTTCTACTGGTGTTGAAGTGGTGACAAATGGGTCTGTAGAAGCTTCTGCTTATGCTTCAGTGGAAGGATGTGGTGCACAAGCTATTGACAAAGTTCACAATCAGATGCCTGACAAGACATATAAATTAGTTGAAGGAAATTTTGGCTCATCAGATCTGCAGTCCACTGATCTTCCAAAAGCAACACTAAAGCATGTTAAGAATGATTCAGAGAATGTTGATGTTGAGTCAGGTACCAAGGATAGACCAATTATAGAACCAAATAAGATGAAAAACACATCTAAAGGAAAGAAGAAGAGAAGAGAGATACTTCAGAAAGCAGATGCTGCTGGGTCAACTTCTGATCTCTATAATGCATACAAGGGACCTGGGGAAAAGAGAGATGTCTTAAGTTCTGAGAACAAGGAAAGTGTTACTACTTCTCTAAGCATGAAACAATTTGATGTTGGTCAGTCTGATATTAAAGCCAGTGAGAAATGTGATCATAATAAAGTTGAGCTTGATGATTGGGAGGATGTTGCTGAGATGTCTACCCCTAAACTGGAGGTTCATGACATATCTCAAAATGTAGGTGACGGACATGGAAGTACAACAAAAAAATATTCACGTGATTTCCTTCTGAAATTTGTAGAGCAGTGCATTGATCTTCCTGAAGGTTTTGAAATCACTGCAGACATTGGAGCTTTGATGAATGCCAATGTTGGCGGCTCTCATATTTTTGAGCGTGATTCACATCCTAGTCCTGGAAGAGCTGTAGGTGGGTTGTCTCGGATGGATCGTCGTGGCGATGTGGTTATGGAGGATGATAGATGGAACAAAGTTTCTGGTTCTTTTCGTGGACGCGGTCCAGAAGGCACGGGAGGAAATTCAGGATTTCGATTTGGTCATGGAGGCAACTTTGGTGTTTTAAGGAGCCCTCGTGCACAAACACCTCTACAATATGGTGGAGGGATCCTTTCTGGGCCAATGCAATCTGGGGGAAATCAAGGTGGAAGAAATAACCCTAATGGGGAGAGATGGCAGCGATCTGCTAGCTACCAGCAGAGGGGTTTAATTCCTTCTCCCAACCAAACTCCTTTACAAATAATGCACAAAGCTGAGAATAAGTACGAAGTGGGTAAAGTGACAGATGTGGAAGAGGTAAAACAGAGGCAGTTGAAAGCTATCTTGAACAAACTAACGCCACAAAATTTTGACAAACTCTTTGAACAGGTGAAAGAAGTTAATATTGACAATGCAATCACCCTCATTGGTGTCATCTCACAAATATTTGAGAAAGCTCTTATGGAACCTACCTTTTGTGAAATGTATGCCAACTTTTGTTTACATTTGGCTTCTGAGTTGCCTGATTTTAGTGAGGACAATGAAAAAATAACTTTTAAAAGGTTATTATTAAACAAGTGCCAAGAGGAATTTGAGAGGGGTGAAAGGGAAGAAGAAGAAGCAAATAAGGCTGATGAGGGTGAGGTTAAGCAGTCTACTGAGGAAAGGGAAGAAAGAAGAGTTAAAGCAAGAAGACGCATGTTGGGAAACATTAGATTGATTGGAGAACTATATAAGAAGAAAATGTTGACAGAAAGGATAATGCATGAGTGTATCAAGAAGTTACTGGGTCAATATCAAGATCCAGATGAAGAAAACATTGAAGCTTTGTGCAAGCTAATGAGTACTATTGGGGAGATGATTGACCATCCAAAAGCCAAGGAACATATGGATGCATATTTTGAAAGGATGAAATTATTATCAATCAACATGAATTTATCTTCTAGGGTGAGGTTTATGTTGAAGGATGCCATTGATTTGAGAAAGAATAAATGGCAACAAAGGAGGAAAGTAGAAGGTCCCAAAAAGATTGAGGAGGTACATAGGGATGCTGCTCAGGAAAGGCAATCCCATGGTGGTAGGTCAAATCGTGGTCCTGGTAACAATCAGTCGAGTAGAAGGAATCCCATTGATTTTAGTCCAAGAGTACCATCTTCTAATTCTCAAATGGGTGGGTTATGTGGTCTTCCAACTCAAGCACGTGGGTATGGTGGCTCTCAGGATGCTCAATTTGAGGAACAACAATCTTATGAAGCTAAGACCTTATCAGTTCCTTTGCCTCAAAGATCTTTAGGAGATGATTCTATAACCTTGGTACCTCAAGGTGGTCTTGCTAGGGGAATGTCTATGAGAGGATCAACCACAATTTCCAATCTGCCAATGTCTGATGTGGTTCCTCTGCCTAGAGACCCTCATATAATGACTGCAGGGCTTAATGCTCAGAATAATTCATCAGAGCGCACACAATATAACTCAATGGAGGATCTTGGGTCAAGACATGGTACTAACAGGTCTTTAGGTCCATCTACTCATGATCAATCAATTGCCCCTGAGCATAATGTAAACCATGGTAACAGAAACTTGAGGAGTGTTTCACCTGCTGCTCAATTGCAAGGGTCCATAATCTCTCAGAATGCTTATTCAGATAAGATTTTGTCAGAAGAACAACTGAGAGACATGTCTTTGTCAGCTATAAGAGAATACTACAGTGCTAGAGATGAGAATGAACTTGTTTTGTGTGTCAAAGATTTGAACTCTCCAAGCTTCTATCCTTCTATGGTTTCTCTCTGGGTCACAGATTCATTTGAGAGAAAGGATACAGAAAGAGATCTTCTGACCAAACTACTCATCAACCTTGTGAAATCTCAACATCACACCTTGAATCAAGTCCAACTCATCAAAGGGTTTGAATCTGTTCTCTGTACACTGGAGGATGTCGTTAATGATGCCCCTAGAGCAGCTGAGTTTCTTGGCCGAATTTTTGCTAAAATCATAATAGAGAAAGTAGCAACTTTTACTGAGATTGCACAATTAATACATGATGGTGGAGAAGAGCCAGGTAGTCTCTTAGAAATTGGACTTGCAGGTGATGTTCTTGGAAGCACGTTGGAGGTAATTCAAAATGAAAAGGGAGACGTGCTTCTGAATGAGATTCTTTCAGGAAGCTCTAATTTCCAATTGAAAACTTTCCAGCCACCTAATGCTAAAATATCAAGGAAGTTGGAAAAATTTATTTAG 4920 0.4079 MSFNQSKVEKNDVVYRRNGRSSTFNQQRGSYGKAGGDGGGIAPSNNSLSTARSFNKKSNNAQGGQSRLNPSQGNSTESNNASAARIISNGIHLHGAPDGPITKSSESSAGHKSTGIVPKAETASLPPLISDPVLPTSLAKGDDESKAFPFQFGSIVPGVINGMAIPARTSSAPPSFDKQKPDQALDDSDKSVSSDPIPPVPKQQNSHEKDAGVNEQSNIEEIKANKDSEVSNLTSVNQISKPFVAPVTGISMSTSYHQSQAPLQFGGANPQIQSQGMTTTSIQMPIPMPLPIGNATQVQQPVFIPGLQPHPMHPQGIMHQGQNISYSPQMGNQLGNMGIGIGCQYPQQQGGKFAGPRKTTHVKITHPETHEELRLDKRMDAYSNGGSSGVRPHPIIPSQSQPVKSFPASHPMNYFSSNSYNTNSPYYPPNSLPLTSGPMTPNCQPPTFNFPLHHGPQGVSFMNLSSQGSLPTNKTSTPTGITSMTIKPNGTTTIVDSSLSNSCIADVQNGESPGSTISSETFSEVSPQRAKFSSDFVADVSSNEGGRESLGISNSLKDKNPGKKDQISQNQVSVRSPTMDTILSGVVDQDISDVGLSNALGIKKNNSAAITIEDLPRSDTTSTGVEVVTNGSVEASAYASVEGCGAQAIDKVHNQMPDKTYKLVEGNFGSSDLQSTDLPKATLKHVKNDSENVDVESGTKDRPIIEPNKMKNTSKGKKKRREILQKADAAGSTSDLYNAYKGPGEKRDVLSSENKESVTTSLSMKQFDVGQSDIKASEKCDHNKVELDDWEDVAEMSTPKLEVHDISQNVGDGHGSTTKKYSRDFLLKFVEQCIDLPEGFEITADIGALMNANVGGSHIFERDSHPSPGRAVGGLSRMDRRGDVVMEDDRWNKVSGSFRGRGPEGTGGNSGFRFGHGGNFGVLRSPRAQTPLQYGGGILSGPMQSGGNQGGRNNPNGERWQRSASYQQRGLIPSPNQTPLQIMHKAENKYEVGKVTDVEEVKQRQLKAILNKLTPQNFDKLFEQVKEVNIDNAITLIGVISQIFEKALMEPTFCEMYANFCLHLASELPDFSEDNEKITFKRLLLNKCQEEFERGEREEEEANKADEGEVKQSTEEREERRVKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQYQDPDEENIEALCKLMSTIGEMIDHPKAKEHMDAYFERMKLLSINMNLSSRVRFMLKDAIDLRKNKWQQRRKVEGPKKIEEVHRDAAQERQSHGGRSNRGPGNNQSSRRNPIDFSPRVPSSNSQMGGLCGLPTQARGYGGSQDAQFEEQQSYEAKTLSVPLPQRSLGDDSITLVPQGGLARGMSMRGSTTISNLPMSDVVPLPRDPHIMTAGLNAQNNSSERTQYNSMEDLGSRHGTNRSLGPSTHDQSIAPEHNVNHGNRNLRSVSPAAQLQGSIISQNAYSDKILSEEQLRDMSLSAIREYYSARDENELVLCVKDLNSPSFYPSMVSLWVTDSFERKDTERDLLTKLLINLVKSQHHTLNQVQLIKGFESVLCTLEDVVNDAPRAAEFLGRIFAKIIIEKVATFTEIAQLIHDGGEEPGSLLEIGLAGDVLGSTLEVIQNEKGDVLLNEILSGSSNFQLKTFQPPNAKISRKLEKFI 1639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00241 1639 MobiDBLite consensus disorder prediction 734 756 - -
Viun10g00241 1639 MobiDBLite consensus disorder prediction 166 215 - -
Viun10g00241 1639 Pfam MA3 domain 1456 1563 IPR003891 -
Viun10g00241 1639 MobiDBLite consensus disorder prediction 938 967 - -
Viun10g00241 1639 MobiDBLite consensus disorder prediction 1252 1287 - -
Viun10g00241 1639 SUPERFAMILY ARM repeat 999 1227 IPR016024 -
Viun10g00241 1639 MobiDBLite consensus disorder prediction 942 967 - -
Viun10g00241 1639 Pfam MIF4G domain 1003 1225 IPR003890 GO:0003723|GO:0005515
Viun10g00241 1639 Gene3D - 1442 1639 - -
Viun10g00241 1639 MobiDBLite consensus disorder prediction 1225 1251 - -
Viun10g00241 1639 MobiDBLite consensus disorder prediction 467 488 - -
Viun10g00241 1639 FunFam Eukaryotic translation initiation factor 4G 1444 1638 - -
Viun10g00241 1639 SUPERFAMILY ARM repeat 1446 1637 IPR016024 -
Viun10g00241 1639 MobiDBLite consensus disorder prediction 42 86 - -
Viun10g00241 1639 MobiDBLite consensus disorder prediction 1095 1121 - -
Viun10g00241 1639 MobiDBLite consensus disorder prediction 1 125 - -
Viun10g00241 1639 MobiDBLite consensus disorder prediction 1225 1287 - -
Viun10g00241 1639 MobiDBLite consensus disorder prediction 539 575 - -
Viun10g00241 1639 Gene3D - 1003 1238 - -
Viun10g00241 1639 MobiDBLite consensus disorder prediction 505 525 - -
Viun10g00241 1639 FunFam Eukaryotic translation initiation factor 4G 1003 1238 - -
Viun10g00241 1639 MobiDBLite consensus disorder prediction 539 556 - -
Viun10g00241 1639 Coils Coil 1085 1105 - -
Viun10g00241 1639 ProSiteProfiles MI domain profile. 1450 1574 IPR003891 -
Viun10g00241 1639 SMART if4_15 1003 1225 IPR003890 GO:0003723|GO:0005515
Viun10g00241 1639 SMART ma3_7 1451 1565 IPR003891 -
Viun10g00241 1639 MobiDBLite consensus disorder prediction 1388 1421 - -
Viun10g00241 1639 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 325 1638 IPR045208 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00241 Viun-Chr10 1787639 1798016 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00241 1 1638 Eukaryotic Initiation Factors Gene Family AT3G60240 44.847 0.0 1213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00241 K03260 - gmx:100798562 2342
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g00241 10 1787639 1798016 Viun10g00241 10 1787639 1798016 ECH
Viun10g00241 10 1787639 1798016 Viun5g01925 5 19607704 19616722 PCT