Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00240 ATGTCCTTCAATCAATCAAAGGTGGAAAAGAACGACGTCGTTTACAGAAGAAACGGACGATCCTCCACCTTTAACCAGCAAAGAGGTTCCTACGGCAAAGCTGGTGGCGATGGCGGTGGAATCGCGCCGTCAAACAATTCGTTATCCACTGCCCGAAGTTTTAACAAGAAGTCTAATAATGCACAAGGTGGGCAATCTAGGCTAAATCCTTCCCAGGGAAATTCAACGGAGTCAAATAATGCATCTGCTGCCCGGATCATTAGTAATGGTATCCACTTACATGGTGCACCAGATGGACCAATTACAAAGTCATCTGAATCATCAGCTGGGCATAAGAGCACTGGAATTGTTCCAAAGGCTGAAACTGCTTCATTGCCCCCTTTAATTTCTGATCCAGTACTTCCCACAAGCCTTGCTAAGGGAGATGATGAGTCTAAGGCATTCCCCTTTCAATTTGGATCCATTGTTCCTGGTGTCATTAATGGGATGGCAATTCCTGCTCGTACAAGTTCAGCTCCTCCTAGTTTTGATAAGCAGAAGCCTGATCAGGCTCTTGATGACTCTGACAAATCTGTGTCTTCGGATCCAATTCCTCCTGTTCCAAAGCAGCAGAATTCACATGAGAAAGATGCTGGTGTCAATGAGCAATCTAACATTGAGGAGATTAAGGCAAACAAGGATTCTGAGGTGTCAAATTTAACCTCAGTAAATCAGATCTCAAAACCCTTTGTTGCTCCTGTAACTGGGATTTCAATGTCAACTTCATATCACCAATCACAGGCTCCTTTACAGTTTGGAGGTGCTAATCCACAGATTCAATCTCAGGGCATGACAACAACGTCCATCCAAATGCCTATACCGATGCCTTTACCAATTGGTAATGCTACACAAGTGCAACAGCCGGTTTTTATTCCAGGTCTTCAACCTCATCCAATGCATCCTCAAGGGATCATGCATCAAGGCCAAAACATTAGTTATTCTCCTCAAATGGGTAATCAATTAGGCAACATGGGCATTGGCATAGGTTGTCAATATCCACAACAGCAAGGAGGAAAATTTGCTGGTCCTCGGAAAACTACCCATGTAAAGATAACTCATCCTGAGACACATGAAGAGTTAAGACTTGATAAAAGGATGGATGCATACTCAAATGGTGGGTCATCTGGTGTTAGGCCACATCCTATCATACCTTCTCAATCCCAGCCTGTTAAATCTTTTCCGGCTTCTCATCCTATGAACTATTTTTCATCCAACTCGTATAATACAAATTCTCCTTATTATCCACCTAATTCTCTCCCATTAACAAGTGGCCCAATGACTCCTAATTGTCAACCACCAACATTTAATTTTCCTCTGCACCATGGTCCGCAAGGTGTGAGTTTTATGAATTTATCTTCACAAGGTTCCTTGCCTACTAATAAAACTAGCACTCCAACAGGGATTACATCTATGACCATTAAGCCTAATGGTACAACTACTATAGTGGACTCATCCTTGTCGAATTCCTGTATTGCTGATGTTCAAAATGGAGAATCCCCTGGTTCAACAATATCTTCGGAAACTTTTTCAGAAGTTTCTCCACAACGAGCTAAGTTTTCTAGTGATTTTGTCGCAGATGTGTCTAGTAATGAAGGTGGAAGGGAATCTCTCGGTATCTCCAACTCTTTGAAGGACAAAAATCCAGGGAAGAAAGATCAAATATCACAAAATCAGGTTTCTGTACGATCTCCCACAATGGACACTATACTTTCTGGAGTTGTTGATCAAGATATATCTGATGTTGGACTGTCCAATGCTTTAGGAATTAAAAAAAATAATTCTGCAGCAATTACTATTGAAGATCTTCCAAGATCTGATACAACTTCTACTGGTGTTGAAGTGGTGACAAATGGGTCTGTAGAAGCTTCTGCTTATGCTTCAGTGGAAGGATGTGGTGCACAAGCTATTGACAAAGTTCACAATCAGATGCCTGACAAGACATATAAATTAGTTGAAGATCTGCAGTCCACTGATCTTCCAAAAGCAACACTAAAGCATGTTAAGAATGATTCAGAGAATGTTGATGTTGAGTCAGGTACCAAGGATAGACCAATTATAGAACCAAATAAGATGAAAAACACATCTAAAGGAAAGAAGAAGAGAAGAGAGATACTTCAGAAAGCAGATGCTGCTGGGTCAACTTCTGATCTCTATAATGCATACAAGGGACCTGGGGAAAAGAGAGATGTCTTAAGTTCTGAGAACAAGGAAAGTGTTACTACTTCTCTAAGCATGAAACAATTTGATGTTGGTCAGTCTGATATTAAAGCCAGTGAGAAATGTGATCATAATAAAGTTGAGCTTGATGATTGGGAGGATGTTGCTGAGATGTCTACCCCTAAACTGGAGGTTCATGACATATCTCAAAATGTAGGTGACGGACATGGAAGTACAACAAAAAAATATTCACGTGATTTCCTTCTGAAATTTGTAGAGCAGTGCATTGATCTTCCTGAAGGTTTTGAAATCACTGCAGACATTGGAGCTTTGATGAATGCCAATGTTGGCGGCTCTCATATTTTTGAGCGTGATTCACATCCTAGTCCTGGAAGAGCTGTAGGTGGGTTGTCTCGGATGGATCGTCGTGGCGATGTGGTTATGGAGGATGATAGATGGAACAAAGTTTCTGGTTCTTTTCGTGGACGCGGTCCAGAAGGCACGGGAGGAAATTCAGGATTTCGATTTGGTCATGGAGGCAACTTTGGTGTTTTAAGGAGCCCTCGTGCACAAACACCTCTACAATATGGTGGAGGGATCCTTTCTGGGCCAATGCAATCTGGGGGAAATCAAGGTGGAAGAAATAACCCTAATGGGGAGAGATGGCAGCGATCTGCTAGCTACCAGCAGAGGGGTTTAATTCCTTCTCCCAACCAAACTCCTTTACAAATAATGCACAAAGCTGAGAATAAGTACGAAGTGGGTAAAGTGACAGATGTGGAAGAGGTAAAACAGAGGCAGTTGAAAGCTATCTTGAACAAACTAACGCCACAAAATTTTGACAAACTCTTTGAACAGGTGAAAGAAGTTAATATTGACAATGCAATCACCCTCATTGGTGTCATCTCACAAATATTTGAGAAAGCTCTTATGGAACCTACCTTTTGTGAAATGTATGCCAACTTTTGTTTACATTTGGCTTCTGAGTTGCCTGATTTTAGTGAGGACAATGAAAAAATAACTTTTAAAAGGTTATTATTAAACAAGTGCCAAGAGGAATTTGAGAGGGGTGAAAGGGAAGAAGAAGAAGCAAATAAGGCTGATGAGGGTGAGGTTAAGCAGTCTACTGAGGAAAGGGAAGAAAGAAGAGTTAAAGCAAGAAGACGCATGTTGGGAAACATTAGATTGATTGGAGAACTATATAAGAAGAAAATGTTGACAGAAAGGATAATGCATGAGTGTATCAAGAAGTTACTGGGTCAATATCAAGATCCAGATGAAGAAAACATTGAAGCTTTGTGCAAGCTAATGAGTACTATTGGGGAGATGATTGACCATCCAAAAGCCAAGGAACATATGGATGCATATTTTGAAAGGATGAAATTATTATCAATCAACATGAATTTATCTTCTAGGGTGAGGTTTATGTTGAAGGATGCCATTGATTTGAGAAAGAATAAATGGCAACAAAGGAGGAAAGTAGAAGGTCCCAAAAAGATTGAGGAGGTACATAGGGATGCTGCTCAGGAAAGGCAATCCCATGGTGGTAGGTCAAATCGTGGTCCTGGTAACAATCAGTCGAGTAGAAGGAATCCCATTGATTTTAGTCCAAGAGTACCATCTTCTAATTCTCAAATGGGTGGGTTATGTGGTCTTCCAACTCAAGCACGTGGGTATGGTGGCTCTCAGGATGCTCAATTTGAGGAACAACAATCTTATGAAGCTAAGACCTTATCAGTTCCTTTGCCTCAAAGATCTTTAGGAGATGATTCTATAACCTTGGTACCTCAAGGTGGTCTTGCTAGGGGAATGTCTATGAGAGGATCAACCACAATTTCCAATCTGCCAATGTCTGATGTGGTTCCTCTGCCTAGAGACCCTCATATAATGACTGCAGGGCTTAATGCTCAGAATAATTCATCAGAGCGCACACAATATAACTCAATGGAGGATCTTGGGTCAAGACATGGTACTAACAGGTCTTTAGGTCCATCTACTCATGATCAATCAATTGCCCCTGAGCATAATGTAAACCATGGTAACAGAAACTTGAGGAGTGTTTCACCTGCTGCTCAATTGCAAGGGTCCATAATCTCTCAGAATGCTTATTCAGATAAGATTTTGTCAGAAGAACAACTGAGAGACATGTCTTTGTCAGCTATAAGAGAATACTACAGTGCTAGAGATGAGAATGAACTTGTTTTGTGTGTCAAAGATTTGAACTCTCCAAGCTTCTATCCTTCTATGGTTTCTCTCTGGGTCACAGATTCATTTGAGAGAAAGGATACAGAAAGAGATCTTCTGACCAAACTACTCATCAACCTTGTGAAATCTCAACATCACACCTTGAATCAAGTCCAACTCATCAAAGGGTTTGAATCTGTTCTCTGTACACTGGAGGATGTCGTTAATGATGCCCCTAGAGCAGCTGAGTTTCTTGGCCGAATTTTTGCTAAAATCATAATAGAGAAAGTAGCAACTTTTACTGAGATTGCACAATTAATACATGATGGTGGAGAAGAGCCAGGTAGTCTCTTAGAAATTGGACTTGCAGGTGATGTTCTTGGAAGCACGTTGGAGGTAATTCAAAATGAAAAGGGAGACGTGCTTCTGAATGAGATTCTTTCAGGAAGCTCTAATTTCCAATTGAAAACTTTCCAGCCACCTAATGCTAAAATATCAAGGAAGTTGGAAAAATTTATTTAG 4902 0.408 MSFNQSKVEKNDVVYRRNGRSSTFNQQRGSYGKAGGDGGGIAPSNNSLSTARSFNKKSNNAQGGQSRLNPSQGNSTESNNASAARIISNGIHLHGAPDGPITKSSESSAGHKSTGIVPKAETASLPPLISDPVLPTSLAKGDDESKAFPFQFGSIVPGVINGMAIPARTSSAPPSFDKQKPDQALDDSDKSVSSDPIPPVPKQQNSHEKDAGVNEQSNIEEIKANKDSEVSNLTSVNQISKPFVAPVTGISMSTSYHQSQAPLQFGGANPQIQSQGMTTTSIQMPIPMPLPIGNATQVQQPVFIPGLQPHPMHPQGIMHQGQNISYSPQMGNQLGNMGIGIGCQYPQQQGGKFAGPRKTTHVKITHPETHEELRLDKRMDAYSNGGSSGVRPHPIIPSQSQPVKSFPASHPMNYFSSNSYNTNSPYYPPNSLPLTSGPMTPNCQPPTFNFPLHHGPQGVSFMNLSSQGSLPTNKTSTPTGITSMTIKPNGTTTIVDSSLSNSCIADVQNGESPGSTISSETFSEVSPQRAKFSSDFVADVSSNEGGRESLGISNSLKDKNPGKKDQISQNQVSVRSPTMDTILSGVVDQDISDVGLSNALGIKKNNSAAITIEDLPRSDTTSTGVEVVTNGSVEASAYASVEGCGAQAIDKVHNQMPDKTYKLVEDLQSTDLPKATLKHVKNDSENVDVESGTKDRPIIEPNKMKNTSKGKKKRREILQKADAAGSTSDLYNAYKGPGEKRDVLSSENKESVTTSLSMKQFDVGQSDIKASEKCDHNKVELDDWEDVAEMSTPKLEVHDISQNVGDGHGSTTKKYSRDFLLKFVEQCIDLPEGFEITADIGALMNANVGGSHIFERDSHPSPGRAVGGLSRMDRRGDVVMEDDRWNKVSGSFRGRGPEGTGGNSGFRFGHGGNFGVLRSPRAQTPLQYGGGILSGPMQSGGNQGGRNNPNGERWQRSASYQQRGLIPSPNQTPLQIMHKAENKYEVGKVTDVEEVKQRQLKAILNKLTPQNFDKLFEQVKEVNIDNAITLIGVISQIFEKALMEPTFCEMYANFCLHLASELPDFSEDNEKITFKRLLLNKCQEEFERGEREEEEANKADEGEVKQSTEEREERRVKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQYQDPDEENIEALCKLMSTIGEMIDHPKAKEHMDAYFERMKLLSINMNLSSRVRFMLKDAIDLRKNKWQQRRKVEGPKKIEEVHRDAAQERQSHGGRSNRGPGNNQSSRRNPIDFSPRVPSSNSQMGGLCGLPTQARGYGGSQDAQFEEQQSYEAKTLSVPLPQRSLGDDSITLVPQGGLARGMSMRGSTTISNLPMSDVVPLPRDPHIMTAGLNAQNNSSERTQYNSMEDLGSRHGTNRSLGPSTHDQSIAPEHNVNHGNRNLRSVSPAAQLQGSIISQNAYSDKILSEEQLRDMSLSAIREYYSARDENELVLCVKDLNSPSFYPSMVSLWVTDSFERKDTERDLLTKLLINLVKSQHHTLNQVQLIKGFESVLCTLEDVVNDAPRAAEFLGRIFAKIIIEKVATFTEIAQLIHDGGEEPGSLLEIGLAGDVLGSTLEVIQNEKGDVLLNEILSGSSNFQLKTFQPPNAKISRKLEKFI 1633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00240 1633 Gene3D - 997 1232 - -
Viun10g00240 1633 MobiDBLite consensus disorder prediction 1246 1281 - -
Viun10g00240 1633 MobiDBLite consensus disorder prediction 166 215 - -
Viun10g00240 1633 Gene3D - 1436 1633 - -
Viun10g00240 1633 MobiDBLite consensus disorder prediction 1219 1245 - -
Viun10g00240 1633 SUPERFAMILY ARM repeat 1440 1631 IPR016024 -
Viun10g00240 1633 FunFam Eukaryotic translation initiation factor 4G 1438 1632 - -
Viun10g00240 1633 ProSiteProfiles MI domain profile. 1444 1568 IPR003891 -
Viun10g00240 1633 MobiDBLite consensus disorder prediction 728 750 - -
Viun10g00240 1633 MobiDBLite consensus disorder prediction 1089 1115 - -
Viun10g00240 1633 SUPERFAMILY ARM repeat 993 1221 IPR016024 -
Viun10g00240 1633 MobiDBLite consensus disorder prediction 1219 1281 - -
Viun10g00240 1633 MobiDBLite consensus disorder prediction 932 961 - -
Viun10g00240 1633 MobiDBLite consensus disorder prediction 467 488 - -
Viun10g00240 1633 MobiDBLite consensus disorder prediction 936 961 - -
Viun10g00240 1633 Coils Coil 1079 1099 - -
Viun10g00240 1633 SMART if4_15 997 1219 IPR003890 GO:0003723|GO:0005515
Viun10g00240 1633 MobiDBLite consensus disorder prediction 42 86 - -
Viun10g00240 1633 SMART ma3_7 1445 1559 IPR003891 -
Viun10g00240 1633 MobiDBLite consensus disorder prediction 1 125 - -
Viun10g00240 1633 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 325 1632 IPR045208 GO:0003743
Viun10g00240 1633 MobiDBLite consensus disorder prediction 539 575 - -
Viun10g00240 1633 FunFam Eukaryotic translation initiation factor 4G 997 1232 - -
Viun10g00240 1633 MobiDBLite consensus disorder prediction 505 525 - -
Viun10g00240 1633 MobiDBLite consensus disorder prediction 1382 1415 - -
Viun10g00240 1633 MobiDBLite consensus disorder prediction 539 556 - -
Viun10g00240 1633 Pfam MIF4G domain 997 1219 IPR003890 GO:0003723|GO:0005515
Viun10g00240 1633 Pfam MA3 domain 1450 1557 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00240 Viun-Chr10 1787639 1798016 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00240 1 1632 Eukaryotic Initiation Factors Gene Family AT3G60240 44.730 0.0 1212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00240 K03260 - gmx:100798562 2327.75