Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00236 ATGGAGATGAACACAGTGAAGATTTTGTTAGGAGCAGTTTTGGTGTTGTTGATTCATGTCTTCAATGTTTTGGTGTTGAGGCCAAGATCAATGAGAGCAAAGCTTCAGAAGCAGGGGATTAAAGGGCCTTCTCCTCACTTCTACTTTGGCAACATCCCAGAAATGAAGAATATTTTGCTTCAAGTTCATTCAACACCAGCCACTGAAGATAAAGAGAAAGATGAAGACTTTTCTGTCTCTCACAAGTGGCCTTTCACTCTCTTCCCTCATGTTCAAAAGTGGATCAACCAATATGGTCCCATATACTTGTTTTCTTCTGGGTCTATTCAGTGGCTAATGGTGTCAGATATAGAGATGGTGAAGGAAGTGGTCATGCACACCTCTTTGAATCTAGGGAAGCCTACTTATCTGTCCAAAGACATGGGGCCACTCTTGGGAAAAGGCATAATGACATCAAATGGGTCAATTTGGGTTCATCAGAGGAAGATAATTGCCCCAGAACTATTCCTTGTTAAAGTGAAGGCAATGATTAATCTGATAGTGGACTCAACAAATACAACACTAAGGTCTTGGGAGGGTAGACTTCAAGGTGAGGGAGCAGTATCAGAGATTAAAATTGATGAAGATCTTCGAAGTTTGTCAGCTGACATAATTGCCAGAGCTTGTTTTGGGAGCAATTACATTGAAGGAAGAGAAATATTCTCAAAGCTCAGAGATCTTCAAACTATCTTGTCCAAGCGTCATTCTGGAATTCCAGGCTTTCGATACTTGCCAAACAAAAGCAACAGAGAAATGTGGAGATTGGAGAAAGAGATAGACTCAAAGATAGCAAAGCTCATAAAGCAACGTTTGGAGGAAACTCATGAGCAGGATCTCTTACAAATGATTCTTGAGGGTGCAAAGAACTGCGAGGGTGGTGGTGATGGCCTCGTATCAGATTCCATCTCACGTGACAGGTTTGTGATAGATAACTGCAAAAATATATTCTTCGCTGGACATGAGACTACTGCCATCACAGCATCATGGTGCTTAATGCTGTTAGCTGTGCATCAAGATTGGCAAGACCGTGTTCGAGCTGAAGTGCTTGAAGTTTGTGGAGAAAATGCTCCTGATGCAGACATGCTCAAAAGTTTGAAAACTTTAACCATGGTGATTCAAGAGACTCTGAGGCTGTATCCACCAGCAGTATTCGTTGTTAGAACAGCTCTTGAAGATGTAAGTCTAAAAGGGTTACTAATTCCAAAAGGAATGAACATTCAGATTCCACTCTCGGTGCTGCAGCATGACCCTCTTCTCTGGGGTGCTGATGCTCACAAGTTCAATCCTGAAAGATTTGAAAATGGGGTGCTTGGAGCATGCAAGGTTCCACAAGCTTATATTCCATTTGGAATAGGGGCACGTGTGTGTGTTGGACAGCACTTAGCCATGGTAGAACTGAAGGTGATTTTGTCTCTGATTCTGATGAAGTTTCACTTCTCTCTCTCACCAAGTTACTGCCATTCACCAGCCTTTCGTTTGGTCGTGGAACCTGGCCATGGAGTTGTTCTTCAGATGACAAGAATTTGA 1566 0.424 MEMNTVKILLGAVLVLLIHVFNVLVLRPRSMRAKLQKQGIKGPSPHFYFGNIPEMKNILLQVHSTPATEDKEKDEDFSVSHKWPFTLFPHVQKWINQYGPIYLFSSGSIQWLMVSDIEMVKEVVMHTSLNLGKPTYLSKDMGPLLGKGIMTSNGSIWVHQRKIIAPELFLVKVKAMINLIVDSTNTTLRSWEGRLQGEGAVSEIKIDEDLRSLSADIIARACFGSNYIEGREIFSKLRDLQTILSKRHSGIPGFRYLPNKSNREMWRLEKEIDSKIAKLIKQRLEETHEQDLLQMILEGAKNCEGGGDGLVSDSISRDRFVIDNCKNIFFAGHETTAITASWCLMLLAVHQDWQDRVRAEVLEVCGENAPDADMLKSLKTLTMVIQETLRLYPPAVFVVRTALEDVSLKGLLIPKGMNIQIPLSVLQHDPLLWGADAHKFNPERFENGVLGACKVPQAYIPFGIGARVCVGQHLAMVELKVILSLILMKFHFSLSPSYCHSPAFRLVVEPGHGVVLQMTRI 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00236 521 PANTHER CYTOCHROME P450 FAMILY MEMBER 17 513 - -
Viun10g00236 521 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00236 521 PRINTS P450 superfamily signature 469 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00236 521 PRINTS P450 superfamily signature 331 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00236 521 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00236 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506|GO:0016705
Viun10g00236 521 SUPERFAMILY Cytochrome P450 83 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00236 521 Pfam Cytochrome P450 92 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00236 521 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00236 521 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00236 521 PRINTS E-class P450 group I signature 213 231 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00236 521 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00236 521 PRINTS E-class P450 group I signature 95 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00236 521 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g00236 521 Gene3D Cytochrome P450 28 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00236 Viun-Chr10 1757222 1760794 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00236 119 518 Cytochrome P450 AT5G24900 47.445 1.21e-134 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00236 K24544 - gmx:100780335 889.026