Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00206 ATGGAAGGAGAGAGAGGTGTTAATCCCAGCTATGATCTTCAAGTTTCATTCACCAACACCCCTCAAGCCATCCATGAAATGGGTTTTGTCCCATTTGAAGAAAATCAGGTTCTTAGCTTCTTAACACCCTCAGCTCAATCCCAATCTTCTCAGCTCTCTCTGACCGGAGGCGGCGGTGGTCGTGACAACACCGCCGCGGTCACCACCACTGTCACTACTACTACTACTTCTGGATCAGTTGGTTTTAACCATAATGACCTTGCTTCCAGAACTTCTTGGAACAATGAACAGGTGAGAACCCTGGATCCTAATAAAGCTGTCAATGATGAAAATTGCACCGGAAATACAAGTGATGGCAACAACACATGGTGGAGAAGTTCAGGGTCAGAGAAGAACAAGGTGAAAGTGAGGAGGAAGCTGAGGGAACCAAGGTTTTGTTTTCAGACAAGAAGTGATGTGGATGTGCTTGATGATGGTTACAAATGGAGGAAGTATGGTCAGAAAGTTGTGAAGAATAGCCTTCACCCAAGAAGTTACTACCGTTGTACTCATAACAACTGTAGAGTGAAGAAAAGGGTTGAAAGACTCTCAGAAGATTGTCGAATGGTAATAACAACCTACGAAGGAAGACACAACCATTCTCCTTGTGATGACTCAAATTCATCAGAACATGAATGTTTCACTTCTTTTTGA 693 0.4343 MEGERGVNPSYDLQVSFTNTPQAIHEMGFVPFEENQVLSFLTPSAQSQSSQLSLTGGGGGRDNTAAVTTTVTTTTTSGSVGFNHNDLASRTSWNNEQVRTLDPNKAVNDENCTGNTSDGNNTWWRSSGSEKNKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHECFTSF 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00206 230 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 77 217 IPR044810 GO:0003700
Viun10g00206 230 ProSiteProfiles WRKY domain profile. 151 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun10g00206 230 MobiDBLite consensus disorder prediction 105 131 - -
Viun10g00206 230 SUPERFAMILY WRKY DNA-binding domain 148 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun10g00206 230 Gene3D WRKY domain 143 209 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun10g00206 230 Pfam WRKY DNA -binding domain 157 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun10g00206 230 MobiDBLite consensus disorder prediction 105 129 - -
Viun10g00206 230 FunFam WRKY transcription factor 57 142 216 - -
Viun10g00206 230 SMART WRKY_cls 156 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00206 Viun-Chr10 1557917 1563528 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00206 3 230 WRKY Transcription Factor Family AT2G44745 56.780 4.64e-76 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun10g00206 WRKY 1.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00206 - - var:108347245 415.231