Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00192 ATGGCTGAGTTCGAATTCGAACTTGATCTCGAAGAAAAATCATGGCATCTCTTTGCACTCCTTCTCCGAATTGGCCACGCAGTATATCCTTCACGCCTCGCCGCAGAGTGCCGATTATTCGCCGCCTCGCCAGAATTTGTCTGCTACATCAGTTCTCTCCCTGGTTCACCACTATCTGTCACAGACAACGGACTCGTCACGCCCTCTGTTAGTACGGTTTTTGCACTTGGAAACTTCTTCTCTCTTCGTCTCTCACCTGAACCCCAGACGCACCGTCTCAGGAAACGCAAGTTACTATTGGACTCGTCTGAAGCAAATGGAGTAGAACACAAAAGGTTAGCGATTCGAAATGGAATTCGAGAAATGTCTTTCCAGAGTTTTGCTGATGCTGCAGAGGCTCTGATGAAAAGAAACTTCCCTGTAATAAAATTTGAATCACAGAACATAGGTAGCGGGAATTTTGTATTCCCCTTGCGTGTTGATAAAAATGAAAAATGTTCAGGTTGTCTAATGCCAAATTTTAAACATAGGCAAGCCAATAATGATGCCAGCCCAACCATGTCTAACGAAGAGGTTTCTAAATCAATTATCAAAGACTTAAACGGTCCAAAGCTAGCGGACGTAAACAGATTCATGGCATGTAATCTTCGTATTGATCGTGCTCTGTTATATTCCTCAATATTCAAGAACGGAATTGATGCTAATAGTTTTGGATTTGGGAAGAAAATGGATTGTTTTGATGCATTTACGCATGACTGTACTGAACTAAATAGTATTAATCATGTGGAAAGTGGTACGGGTGAAAGTAATGCATGTAAAAATCTACCAGGAAGACCTGATGAAGATGATGAACTGCAAAGTGGTTCAAAGAAGGGGTTGAAGGATACTGGCTCAAATAGAGACAAGGTAGATGTCATTCAGATGGTCAATGCTGCACTCTGTGGAGAAGAATTGACTAATGGTTTGCAAAAAAAGAACCCATGCCATGCAATAAATTTGGAAACAATGGAGGGTGAGAGAGACATAATAACTTATAAAAGAGCCAATTCCTCTTCAAATCCCAAGCGGCCTCTGAAATCTTCCAGCACATTAAAGGGGGGACAGAAGAATGATCTGCACCCTAAATCACAAATTCTAAAAGAGTCACCAGCCAGCAGTAAATGTAATAATGTTCCAAAAAATGTTGATCAATTTAAAAATGATCAGAAACTTGCAACGAGGAAGCAAAATCATAAAGAGAACAAAGCAGAAAATATTCCCGCTACTACTAAGGTGGAGAAAAAAGCATATCCATCATTTGAAGCTTTTACAATAGAGGAAGAAGAAGGTTCAGGTGGTTATGGCACTGTCTACCGTGCGCAAAGAACTACGGATGGAAAACGGGTTGCAATAAAATGTCCTCATAGTAATGCTCATAAAAACCACGTAACTACTGAACGGAATATGCTCGAGCGTTTTGGTGGTAAAAACTTCATAATAAGGTATGAAGGTTCTTTGAAAAATGACAACACCGACTGCTTTGTTTTAGAGCATGTTGAGCACGAGAGACCTGAGGTTTTGAAAAAGGAAATTGATTTATTCCAGATTCAATGGTACGGTTATTGCCTGTTCAGGGCCCTTTATTGCTTGCACAAAGAGGGAGTTGTTCACAGAGACGTTAAACCTGGAAACTTCCTTTTCTCTCGAAAGCAAAGCAGAGGCTACCTTATTGATTTCAACCTTGCCATGGATTTGAAGCAGAAGAACAACTTTGGAAGTAAATCAAAACCCAACCTGGTTGCATCATCTCATAATGTTTCTCTTTCTTCTCGTTCTGCCCCTTTGGTCCGAGGCAAGAACCTTGGAGGCAGCAAGTCTTTAACATCCAATAAAAGGGCCTTAGCGGATTATAAGAATTATTCTGAACTTAATAGGCATGTGAAACAAAAGGCTTTTAATGGTCCTCAGAAAAGTGGTCCCGACATGGTTGGTGGGAGTTTTCATAGAGCACAAGGAACAGACGGCTCGGGTATAACTTCTGCGAGAGATGCTAGCACTAGGACTGCTTCTGCAGAGAGGCTCAGGGAACCTTTACCTTCCCACGGAAGAAAGGAGCTTATCAGCTTTGTGAATACTATGAAATGTACAAACAACAGTTCAATAATAGGTCCTTCCTCTCAAAGGAAAAGGGTTACTGCTCCCTCAAGCAGGGTAGATGGCAAGATTTTTCATATTACCCCGATGCCTCTGCATTCATCTACTGTTGGTGCGGGATTATTGAGAAGCAAAGGAGATGGAAAACAGAAGAAGGAAGGTTCATGTGTTGGAACCAAAGGATTCCGTGCACCAGAGGTTTTGTTAAGATCTCAGCATCAGGGATATAAGATTGATATTTGGTCAGCTGGCGTCACTCTACTGTATATGGTGATAGGGAAGACTCCTTTCACTGGCGACCCGGAACAGAACATAAAAGAAATTGTTAAATTGCGGGGCAGCGAAGAGTTTTGGGAAGTGGCCAAGTTACATGACCGTGAAGTGTCTTTTCCTGTGGAGTTACTTGATGCGCGATACTTGCAGCCATTGGACTTGGAAGCCTGGTGCAAAACTCACACAAAGAGACCAGAATTTCTTGAGCAGATCCCGAAATCGTTGTTTGATTTGATAGACAAGTGTCTAACAGTTAATCCAAGAAATAGACTTAGTGCTGAAGATGTTCTAAGACATCAATTCTTTGACTCACTTAACGAGTCTCTGAGAAAGCAAAGGATGATGCAACGCGCTATCAGATCGGAGGCTGCAGCAGCTTCTGCTGCAATCTGA 2799 0.4187 MAEFEFELDLEEKSWHLFALLLRIGHAVYPSRLAAECRLFAASPEFVCYISSLPGSPLSVTDNGLVTPSVSTVFALGNFFSLRLSPEPQTHRLRKRKLLLDSSEANGVEHKRLAIRNGIREMSFQSFADAAEALMKRNFPVIKFESQNIGSGNFVFPLRVDKNEKCSGCLMPNFKHRQANNDASPTMSNEEVSKSIIKDLNGPKLADVNRFMACNLRIDRALLYSSIFKNGIDANSFGFGKKMDCFDAFTHDCTELNSINHVESGTGESNACKNLPGRPDEDDELQSGSKKGLKDTGSNRDKVDVIQMVNAALCGEELTNGLQKKNPCHAINLETMEGERDIITYKRANSSSNPKRPLKSSSTLKGGQKNDLHPKSQILKESPASSKCNNVPKNVDQFKNDQKLATRKQNHKENKAENIPATTKVEKKAYPSFEAFTIEEEEGSGGYGTVYRAQRTTDGKRVAIKCPHSNAHKNHVTTERNMLERFGGKNFIIRYEGSLKNDNTDCFVLEHVEHERPEVLKKEIDLFQIQWYGYCLFRALYCLHKEGVVHRDVKPGNFLFSRKQSRGYLIDFNLAMDLKQKNNFGSKSKPNLVASSHNVSLSSRSAPLVRGKNLGGSKSLTSNKRALADYKNYSELNRHVKQKAFNGPQKSGPDMVGGSFHRAQGTDGSGITSARDASTRTASAERLREPLPSHGRKELISFVNTMKCTNNSSIIGPSSQRKRVTAPSSRVDGKIFHITPMPLHSSTVGAGLLRSKGDGKQKKEGSCVGTKGFRAPEVLLRSQHQGYKIDIWSAGVTLLYMVIGKTPFTGDPEQNIKEIVKLRGSEEFWEVAKLHDREVSFPVELLDARYLQPLDLEAWCKTHTKRPEFLEQIPKSLFDLIDKCLTVNPRNRLSAEDVLRHQFFDSLNESLRKQRMMQRAIRSEAAAASAAI 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00192 932 ProSitePatterns Serine/Threonine protein kinases active-site signature. 548 560 IPR008271 GO:0004672|GO:0006468
Viun10g00192 932 PANTHER OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED 377 919 - -
Viun10g00192 932 MobiDBLite consensus disorder prediction 345 401 - -
Viun10g00192 932 Pfam Protein kinase domain 438 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g00192 932 Pfam Protein kinase domain 763 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g00192 932 MobiDBLite consensus disorder prediction 664 686 - -
Viun10g00192 932 SUPERFAMILY Protein kinase-like (PK-like) 427 909 IPR011009 -
Viun10g00192 932 SMART serkin_6 436 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g00192 932 MobiDBLite consensus disorder prediction 275 299 - -
Viun10g00192 932 MobiDBLite consensus disorder prediction 264 299 - -
Viun10g00192 932 MobiDBLite consensus disorder prediction 379 399 - -
Viun10g00192 932 MobiDBLite consensus disorder prediction 665 680 - -
Viun10g00192 932 FunFam Probable serine/threonine-protein kinase DDB_G0291918 428 596 - -
Viun10g00192 932 Gene3D Transferase(Phosphotransferase) domain 1 748 930 - -
Viun10g00192 932 MobiDBLite consensus disorder prediction 345 370 - -
Viun10g00192 932 FunFam Kinase like protein 744 915 - -
Viun10g00192 932 Gene3D Transferase(Phosphotransferase) domain 1 397 596 - -
Viun10g00192 932 ProSiteProfiles Protein kinase domain profile. 436 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00192 Viun-Chr10 1464640 1472336 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00192 768 907 Core Cell Cycle Gene Families AT3G48750 31.944 1.04e-11 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-2 Viun10g00192 Pkinase 2.3e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00192 K02214 - gmx:100783107 1431.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g00192 10 1464640 1472336 Viun10g00192 10 1464640 1472336 ECH