Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00137 ATGAACCCTCATGCTTCAAACACCCACGTGAATGATGCCCTTGATCTCTCCGAGCTCCCTTCAACGACGCCGTTTCAGGACGCGTCGCCGTCGTTGTGGCCGACGGCGGTGTTCGGCCGCAGCAGCATTTTCTCCGCGGAGCTGCCGCTGAAGGAGGACGACGCCGACGACATGGTTATCTACGGCGCTCTGCTTGAGGCCGCCGCCGCCGAATGGTTCCCCGCAAATGGCGGTGGGGTGAGCAATGTAGCAGTTAAAATGGAAAAGGGGGGTGGGAGCAGTGGCACCAAAGGCGCGAGTGGAACTCACGCGCCTCCGGTGAAGGGGTTGAGCTACCGCGGCGTGCGGAGGAGGCCGTGGGGAAAGTTCGCGGCGGAGATAAGGGATGCTAAGAGGAATGGCGTGAGAGTGTGGCTTGGAACCTATGAAACTGCTGAAGACGCAGCTTTGGCTTATGATCGAGCTGCGTTTCGAATGCATGGCTCCAAAGCAAAGCTCAATTTTCCTCATTTGATTGGTTCTGATGAAGCCGAACCAATTAGGGTTACGTCAAAGAAACGTTCGTTGAATGTTTTACCGGCGAGTTTATCGTTGGTGACTGCAAAACGGAGTAAAGATAATTCTTTGGTTGATTCGGAGATGAAGAAGTTGAATATGTGGTAG 663 0.5445 MNPHASNTHVNDALDLSELPSTTPFQDASPSLWPTAVFGRSSIFSAELPLKEDDADDMVIYGALLEAAAAEWFPANGGGVSNVAVKMEKGGGSSGTKGASGTHAPPVKGLSYRGVRRRPWGKFAAEIRDAKRNGVRVWLGTYETAEDAALAYDRAAFRMHGSKAKLNFPHLIGSDEAEPIRVTSKKRSLNVLPASLSLVTAKRSKDNSLVDSEMKKLNMW 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00137 220 FunFam Ethylene-responsive transcription factor 2 111 170 - -
Viun10g00137 220 CDD AP2 112 171 IPR001471 GO:0003700|GO:0006355
Viun10g00137 220 SUPERFAMILY DNA-binding domain 112 170 IPR016177 GO:0003677
Viun10g00137 220 PANTHER DNA-BINDING DOMAIN 92 185 IPR044808 GO:0003700|GO:0009873
Viun10g00137 220 MobiDBLite consensus disorder prediction 90 111 - -
Viun10g00137 220 Pfam AP2 domain 112 161 IPR001471 GO:0003700|GO:0006355
Viun10g00137 220 SMART rav1_2 111 175 IPR001471 GO:0003700|GO:0006355
Viun10g00137 220 Gene3D AP2/ERF domain 111 170 IPR036955 GO:0003700|GO:0006355
Viun10g00137 220 PRINTS Ethylene responsive element binding protein signature 112 123 IPR001471 GO:0003700|GO:0006355
Viun10g00137 220 PRINTS Ethylene responsive element binding protein signature 135 151 IPR001471 GO:0003700|GO:0006355
Viun10g00137 220 ProSiteProfiles AP2/ERF domain profile. 111 169 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00137 Viun-Chr10 826422 827331 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00137 46 213 AP2-EREBP Transcription Factor Family AT2G44840 53.571 1.34e-54 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Viun10g00137 AP2 3.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00137 K09286 - gmx:100804762 252.292