Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00132 ATGGGAGAAGGGTCCGTTGAACTTGAGGCTATCATAAAGGAAGCTGTTGATCTGGAGAACATTCCTCTTGAAGAGGTTTTTGATAATCTCAAATGCACAAGAGAAGGTTTAAGCTCTCAGCAAGTGCAAGAGAGGCTAGACTTGTTTGGATACAATAAGCTTGAAGAAAAGAAGGAAAGTAAGATACTGAAGTTTTTAGGGTTTATGTGGAATCCTCTGTCATGGGTTATGGAAGCTGCTGCTATCATGGCCATAGGCATGGCACATGGAGGGCATGAAAGAGCAGATTATCAAGATTTTATTGGCATAGTTCTATTGCTACTTATAAACTCCACCATTAGTTTCATAGAAGAAAACAATGCTGGCAATGCAGCTGCTGCTCTTATGGCCAGATTAGCCCCAAAAGCAAAGGTACTTCGTGATGGAAAATGGAGTGAAGAAGAAGCTTCAGTGTTGGTTCCTGGAGACATAATAAGCATCAAGCTTGGTGACATCATTCCTGCTGATGCACGTCTCCTTGAAGGTGATCCTTTGAAGATTGATCAGTCTGCTCTTACTGGGGAGTCACTTCCTGTCAGCAAACACCCTGGAGAAGGAGTATATTCTGGTTCAACCTGCAAGCAAGGAGAAATTGAGGCAGTAGTTATTGCAACTGGAGTTCACACCTTTTTTGGGAAGGCAGCTCATCTTGTGGAGAACACAACACATGTTGGACATTTCCAGAAGGTTCTCACATATAGAATTTGTAGTGCTCTTAATGTTCTAACATCTATTGGGAACTTCTGCATCTGTTCAATTGCTGTTGGTATGGTCATTGAAATCATTGTGATATATGCAATCCATCAAAAGGGATACAGAAATGGTATTGATAACCTTCTGGTGCTATTAATTGGTGGGATTCCTATTGCAATGCCAACAGTGCTTTCTGTTACAATGGCTATTGGTTCACACAGGTTGTCTCAGCAGGGTGCCATAACAAAGAGAATGACTGCCATTGAAGAGATGGCTGGAATGGATGTGTTATGCAGTGACAAGACAGGCACATTAACTCTTAACAAGCTTTCAGTAGACAAGAATATCATTGAGGTTTTTGTTAAAGACGTTGACAGTGATATGGTTGTACTTATGGCTGCAAGAGCATCAAGGCTAGAGAACCAGGATGCAATTGATGGTGCTATAGTTTCAATGTTAGCAGACCCAAAGGAGGCAAGAGCTGGAATAAAAGAAGTTCACTTCCTTCCATTCAATCCAACTGATAAAAGAACTGCATTAACATACCTTGATGCTGCTGGTAAGATGCACAGGGTTAGCAAAGGAGCACCAGAGCAGATTCTCAATCTTGCACATAACAAATCAGAAATACAACAAAAGGTTCATGCAATTATTGACAAGTTTGCAGAACGTGGACTTCGTTCTCTTGCAGTTGCCCGCCAGGAAGTGCCTGAGGGAACTAAAGACAGTTCAGGAGGACCATGGGAGTTTGTTGGCCTTCTTCCTCTTTTCGATCCACCTCGCCATGATAGTGCAGAAACAATTAGAAGAGCTCTTGATCTTGGCGTGAGTGTCAAAATGATCACTGGTGATCAACTTGCAATAGGTAAGGAAACAGGAAGACGTCTCGGGATGGGGACTAACATGTATCCTTCTTCATCGCTACTTGGTGAAAACAAAGATGGATTGGGTGCTGTCGCTGTTGATGATCTCATTGAGAATGCTGATGGTTTTGCTGGAGTCTTTCCTGAGCACAAGTATGAGATTGTGAAGAGGTTACAAGCTAGAAAACACATTTGTGGAATGACTGGTGATGGGGTGAACGATGCACCTGCCTTAAAGATAGCAGACATAGGTATTGCTGTAGCAGATGCTACAGATGCTGCCAGAAGCGCATCTGACATAGTCCTAACAGAACCTGGGTTGAGTGTGATCATAAGTGCAGTTTTAACTAGCCGTGCAATTTTCCAGAGAATGAAAAATTACACAATATATGCTATATCTATCACTATTCGTATTGTGCTTGGTTTCATGTTACTGAACAGCTTTTGGAAATTTGACTTTCCTCCCTTTATGGTTCTTGTCATTGCCATTCTCAATGATGGTACCATCATGACAATATCTAAAGATAGGGTTAAGCCCTCTCCAATTCCTGATAGTTGGAAGCTTAGTGAAATTTTTGCAACTGGGATTGTTCTTGGCAGCTATCTGGCTCTAATGACTGTGATCTTCTTCTATATAGTTGTTGAAACAGACTTCTTTCCTAACCATTTTGGCGTGAAACACTTTCATTATAATCCAAATGCTGAGGACAGTGATCCAACCAAAAGAATGTTGGGATCTGCTGTCTATCTTCAAGTTAGTACCATTAGTCAAGCCTTAATTTTCGTGACAAGGTCAAGGGGTTGGTCCTACACAGAAAGACCTGGTCTTTTGCTTGTCACTGCCTTCATCATTGCTCAAGCGATTGCTACTGTTATATCTGCCACTCTCACTTGGAGTGTTGCTGGGATCAGAAGTATCGGTTGGGGCTGGACAGGAGCCATTTGGCTATACAATACTGTCACTTATTTACTTCTAGATCCTTTGAAGTTTGCAGTTCGTTATGCATTAAGTGGAAGGGCATGGAATCTGGTGGTAAACCAAAGGACCGCATTCATCAACAAAAACGACTTTGGTAGAGAAGCTCGTGAGGCTGCATGGGCTACTGAGCAGAGAACCTTACATGGCCTCCACTCTGCTGAGTCAAAAGGGTTTACAGATAAGCACACCTTCAGAGAAATTAATACACTGGCAGAAGAGGCAAGGAGGAGAGCAGAGATAGCAAGGCTGAGAGAGCTTCACACTCTGAAAGGTAGAGTGGAATCATTTGCCAAGCTAAGGGGTTTAGACATAGATGCCATGAACGGACACTACACTGTCTAA 2916 0.4235 MGEGSVELEAIIKEAVDLENIPLEEVFDNLKCTREGLSSQQVQERLDLFGYNKLEEKKESKILKFLGFMWNPLSWVMEAAAIMAIGMAHGGHERADYQDFIGIVLLLLINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEEASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVSKHPGEGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENTTHVGHFQKVLTYRICSALNVLTSIGNFCICSIAVGMVIEIIVIYAIHQKGYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNIIEVFVKDVDSDMVVLMAARASRLENQDAIDGAIVSMLADPKEARAGIKEVHFLPFNPTDKRTALTYLDAAGKMHRVSKGAPEQILNLAHNKSEIQQKVHAIIDKFAERGLRSLAVARQEVPEGTKDSSGGPWEFVGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGENKDGLGAVAVDDLIENADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKIADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAISITIRIVLGFMLLNSFWKFDFPPFMVLVIAILNDGTIMTISKDRVKPSPIPDSWKLSEIFATGIVLGSYLALMTVIFFYIVVETDFFPNHFGVKHFHYNPNAEDSDPTKRMLGSAVYLQVSTISQALIFVTRSRGWSYTERPGLLLVTAFIIAQAIATVISATLTWSVAGIRSIGWGWTGAIWLYNTVTYLLLDPLKFAVRYALSGRAWNLVVNQRTAFINKNDFGREAREAAWATEQRTLHGLHSAESKGFTDKHTFREINTLAEEARRRAEIARLRELHTLKGRVESFAKLRGLDIDAMNGHYTV 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00132 971 PRINTS P-type cation-transporting ATPase superfamily signature 342 356 - -
Viun10g00132 971 PRINTS P-type cation-transporting ATPase superfamily signature 600 619 - -
Viun10g00132 971 PRINTS P-type cation-transporting ATPase superfamily signature 181 195 - -
Viun10g00132 971 PRINTS P-type cation-transporting ATPase superfamily signature 518 528 - -
Viun10g00132 971 PRINTS P-type cation-transporting ATPase superfamily signature 496 507 - -
Viun10g00132 971 PRINTS P-type cation-transporting ATPase superfamily signature 623 635 - -
Viun10g00132 971 Gene3D - 339 637 IPR023214 -
Viun10g00132 971 SUPERFAMILY HAD-like 338 647 IPR036412 -
Viun10g00132 971 Gene3D - 96 835 - -
Viun10g00132 971 NCBIfam plasma-membrane proton-efflux P-type ATPase 36 826 IPR006534 GO:0008553|GO:0016020|GO:0120029
Viun10g00132 971 Pfam haloacid dehalogenase-like hydrolase 338 614 - -
Viun10g00132 971 Gene3D - 920 971 - -
Viun10g00132 971 Gene3D - 134 218 - -
Viun10g00132 971 SUPERFAMILY Calcium ATPase, transmembrane domain M 17 868 IPR023298 -
Viun10g00132 971 Gene3D - 354 501 IPR023299 GO:0000166
Viun10g00132 971 SFLD p-type atpase 324 651 IPR044492 -
Viun10g00132 971 CDD P-type_ATPase_H 36 862 IPR006534 GO:0008553|GO:0016020|GO:0120029
Viun10g00132 971 NCBIfam HAD-IC family P-type ATPase 103 549 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Viun10g00132 971 NCBIfam HAD-IC family P-type ATPase 575 677 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Viun10g00132 971 SMART Cation_ATPase_N_a_2 17 89 IPR004014 -
Viun10g00132 971 Pfam E1-E2 ATPase 132 321 - -
Viun10g00132 971 Pfam Cation transporter/ATPase, N-terminus 20 83 IPR004014 -
Viun10g00132 971 ProSitePatterns E1-E2 ATPases phosphorylation site. 344 350 IPR018303 -
Viun10g00132 971 FunFam Plasma membrane ATPase 494 648 - -
Viun10g00132 971 PANTHER CALCIUM-TRANSPORTING ATPASE 19 904 - -
Viun10g00132 971 PRINTS H+-transporting ATPase (proton pump) signature 572 588 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Viun10g00132 971 PRINTS H+-transporting ATPase (proton pump) signature 600 616 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Viun10g00132 971 PRINTS H+-transporting ATPase (proton pump) signature 781 802 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Viun10g00132 971 PRINTS H+-transporting ATPase (proton pump) signature 631 656 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Viun10g00132 971 PRINTS H+-transporting ATPase (proton pump) signature 458 476 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Viun10g00132 971 FunFam Plasma membrane ATPase 354 501 - -
Viun10g00132 971 SFLD Haloacid Dehalogenase 324 651 - -
Viun10g00132 971 SUPERFAMILY Calcium ATPase, transduction domain A 134 231 IPR008250 -
Viun10g00132 971 FunFam Plasma membrane ATPase 134 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00132 Viun-Chr10 788068 795335 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00132 1 971 Primary Pumps ATPases AT5G62670 77.675 0.0 1521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00132 K01535 - gmx:100794938 1736.08