Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00117 ATGTTGCGTTCTGAAAAATCATTGAGGAGAACACTCTTCTTCTCTGTCTTGGTCTCAACTGGTTTTTTTCCAACTTTGTCTTCTTATGCGAAGACAAAGAGTACGAATCCTTATGACGAAAAACGGTTGCTACAACAAAATCGGCGGATACAGAAGGAAAACAATGCGCCGGAGGACTTCCCAAATTTTATCAGAGAAGGTTTTCAAGTTAAAATAGTATCTTCAGAAAACTATTTAAAGAGTGAGTCAGGGCTCATATACCGGGATTTTGTAGTTGGTGAAGGTGATTGCCCAAAGGATGGTCAGCAGGTAACTTTTCACTATGTTGGTTATAATGAATCTGGTCGTCGAATCGACAGCACTTACTTGCAGGGTACTCCTGCCAAAATCCGCATGGGTACCAAGGCATTAGTTCCAGGATTTGAGGAGGGAATTAGAGAAATGAAACCAGGTGGGAAGAGAAGAATCATCATCCCCCCTGAACTTGGACCACCAGTAGGGCCTTCAACCTTTTTCAGCTCAAAACAGTTTGAAGTTTTTGATGTGGAGCTATTAAGCGTACAAAACTGTGAAAGGAGAACAGTAGCCTTTTACTCAGATGTCATTTGCAATTAA 615 0.413 MLRSEKSLRRTLFFSVLVSTGFFPTLSSYAKTKSTNPYDEKRLLQQNRRIQKENNAPEDFPNFIREGFQVKIVSSENYLKSESGLIYRDFVVGEGDCPKDGQQVTFHYVGYNESGRRIDSTYLQGTPAKIRMGTKALVPGFEEGIREMKPGGKRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQNCERRTVAFYSDVICN 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00117 204 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 98 184 IPR001179 GO:0003755
Viun10g00117 204 SUPERFAMILY FKBP-like 24 188 - -
Viun10g00117 204 Gene3D - 44 196 IPR046357 GO:0003755
Viun10g00117 204 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-2, CHLOROPLASTIC 4 204 IPR044239 -
Viun10g00117 204 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 101 188 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00117 Viun-Chr10 724495 728102 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00117 96 190 Calmodulin-binding Proteins AT5G48570 35.052 1.03e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00117 - - var:108347486 395.586