Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00086 ATGTTTGGACGTGGGCCGAGGAAGAGTGATAACTCCAAATATTATGATGTTCTTGGAGTTTCAAAGAATGCCACTGAAGATGAAATCAAGAAGGCATACAGAAAGGCTGCTATGAAGAATCATCCAGATAAAGGTGGAGATCCTGAGAAGTTTAAGGAGTTAGGTCAAGCATATGAAGTTTTAAGTGATTCGGAGAAGAAAGAATTGTATGATCAGTATGGGGAAGATGCCCTTAAAGAAGGGATGGGAGGAGGAGGAGGTGGCTCGTTTCATAATCCATTTGATATATTTGAGTCATTTTTTGGAGGATCAAGCTTTGGTGGTGGTGGTAGTTCTCGAGGCAGAAGACAAAAACATGGTGAAGATGTGGTGCACTCTTTAAAAGTGTCCTTGGAGGATGTCTATAATGGTGCAACTAAGAAATTATCTCTTTCTAGAAATGTTTTATGCCCAAAATGTAAAGGGAAAGGGTCAAAAAGTGGAGCAGCTAGTAGGTGTTTTGGTTGCCAAGGCACTGGTATGAAGGTCACAAGAAGGCAGATAGGACTAGGCATGATTCAACAAATGCAGCATGTCTGCTCGGACTGCAAAGGATCTGGTGAGGTTATTAGTGAGAGAGATAAATGTCCTCAGTGCAAAGGAAACAAGGTTACTCATGAAAAGAAGGTACTGGAGGTGCATGTTGAAAAGGGGATGCAGCAGGGTCAGAAGATTGTTTTTGAAGGACAAGCTGATGAAGCTCCTGATGCATTGACAGGGGACATTGTTTTAGTATTGGCAGTGAAGGAGCACCCAAAGTTCAGAAGGGAGCGAGATGATCTCTTCATTGATCACAATCTCAGCTTACGTGAGGCACTCTGTGGCTTCCAGTTTGCTATCACACATCTTGATGGCAGGCAATTACTGATCAAATCAAACCCTGGGGAAGTCATCAAGCCAGGTCAATCTAAAGCAATAAATGATGAGGGAATGCCACAACACAACAGGCCATTCATGAAGGGTCGACTCTACATCCAGTTCAATGTTGAATTCCCAGACTCAGGGTTTATTTCCCCTGATCAATGCCAGTTATTGGAAAAGGTATTACCTCAGAAGGGCAGCAAGCGCATTTCAGATGCAGAGCTTGATGACTGTGAGGAGACCACTTTGCATGATGTGAACTTGAAGGAGGAGATGAAACGAAAGCATCAACACCATTACCGGGAGGCATACGATGAAGATGAAGATGAAGGTCCTTCTGGTGGTCACCGAGTGCAATGTGCTCAACAGTAG 1272 0.4355 MFGRGPRKSDNSKYYDVLGVSKNATEDEIKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDSEKKELYDQYGEDALKEGMGGGGGGSFHNPFDIFESFFGGSSFGGGGSSRGRRQKHGEDVVHSLKVSLEDVYNGATKKLSLSRNVLCPKCKGKGSKSGAASRCFGCQGTGMKVTRRQIGLGMIQQMQHVCSDCKGSGEVISERDKCPQCKGNKVTHEKKVLEVHVEKGMQQGQKIVFEGQADEAPDALTGDIVLVLAVKEHPKFRRERDDLFIDHNLSLREALCGFQFAITHLDGRQLLIKSNPGEVIKPGQSKAINDEGMPQHNRPFMKGRLYIQFNVEFPDSGFISPDQCQLLEKVLPQKGSKRISDAELDDCEETTLHDVNLKEEMKRKHQHHYREAYDEDEDEGPSGGHRVQCAQQ 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00086 423 CDD DnaJ 14 63 IPR001623 -
Viun10g00086 423 MobiDBLite consensus disorder prediction 389 414 - -
Viun10g00086 423 ProSiteProfiles Zinc finger CR-type profile. 137 221 IPR001305 GO:0031072|GO:0051082
Viun10g00086 423 Gene3D DnaJ domain 10 111 IPR036869 -
Viun10g00086 423 MobiDBLite consensus disorder prediction 389 423 - -
Viun10g00086 423 SUPERFAMILY Chaperone J-domain 10 109 IPR036869 -
Viun10g00086 423 ProSitePatterns Nt-dnaJ domain signature. 51 70 IPR018253 -
Viun10g00086 423 SUPERFAMILY HSP40/DnaJ peptide-binding domain 267 347 IPR008971 GO:0006457|GO:0051082
Viun10g00086 423 Pfam DnaJ C terminal domain 124 345 IPR002939 -
Viun10g00086 423 FunFam Chaperone protein DNAj, putative 10 114 - -
Viun10g00086 423 Gene3D - 265 346 - -
Viun10g00086 423 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 12 402 IPR044713 GO:0006457|GO:0030544
Viun10g00086 423 Hamap Chaperone protein DnaJ [dnaJ]. 10 373 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Viun10g00086 423 Gene3D - 150 216 - -
Viun10g00086 423 SMART dnaj_3 12 66 IPR001623 -
Viun10g00086 423 CDD DnaJ_zf 150 216 IPR001305 GO:0031072|GO:0051082
Viun10g00086 423 CDD DnaJ_C 121 347 - -
Viun10g00086 423 Gene3D - 112 264 - -
Viun10g00086 423 FunFam DnaJ subfamily A member 2 150 216 - -
Viun10g00086 423 Pfam DnaJ central domain 150 216 IPR001305 GO:0031072|GO:0051082
Viun10g00086 423 FunFam DnaJ subfamily A member 2 264 346 - -
Viun10g00086 423 PRINTS DnaJ domain signature 15 33 IPR001623 -
Viun10g00086 423 PRINTS DnaJ domain signature 46 66 IPR001623 -
Viun10g00086 423 PRINTS DnaJ domain signature 66 85 IPR001623 -
Viun10g00086 423 ProSiteProfiles dnaJ domain profile. 13 74 IPR001623 -
Viun10g00086 423 Pfam DnaJ domain 13 71 IPR001623 -
Viun10g00086 423 SUPERFAMILY HSP40/DnaJ peptide-binding domain 121 265 IPR008971 GO:0006457|GO:0051082
Viun10g00086 423 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 147 218 IPR036410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00086 Viun-Chr10 565793 570205 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00086 14 73 C2H2 Transcription Factor Family AT1G74250 43.478 2.75e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00086 K09503 - gmx:100812236 732.635