Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00084 ATGAGAAAACGTATCAATATGGAAACTGATGCTGACTTCTTCTTCAGTTCCAGTTCCACTTCCACCACCACAACCACCCCTTCAATCTTCACACACACAAACACTTCTATTTCTACAACATCCTCGTCATCTTCATCCTCAAACTCAGATTCATGTAACAAACAACACTCCAAATTAACCCTTCAGAATGACTCAAACACTTCTCAAACCATGTCGGAGGAGAATGAGAAGGACTCGAAAGGGTGCAAGAAGAGGAAGTTATTAGAGAGTCCTACAAATGAGAGGTGCTGCCCTTCTTATAGGGGTGTGAGGATGAGAAACTGGGGCAAATGGGTGTCCGAAATCCGTGAGCCAAGGAAAAAATCGAGAATTTGGCTTGGGACATACCCTACAGCAGAAATGGCTGCTAGAGCACATGATGTAGCAGCCTTAGCCATCAAGGGCCATTCTGCATACCTCAATTTCCCCGAATTGGCTCAAGAACTTCCGACACCAGCTTCGACTTCACCTAAGGACATTCAAGCTGCAGCAGCAAAAGCAGCAAACACGCACTTTGAGGTTGTCGTTAATCGTTGCCAAAGTACTGTTCTTGAAGAAGAAGGAGAAGAAGAAAAAGAACGAAGGCAAGTAGAACATGTCTCAATGGATAACACACAAGACTCTTCAAGCTCAAACTCTACCATTGATGATGATGAGACTCTGTTTGATCTACCAGATCTTTTCCCTCATGAACTTTCTTCTTGGCATCTGTGTGCAGTTGGTAGTGGATTTAGGCTTCAGGAGTCACTTTTTTGGGAGAATTATTAG 807 0.4362 MRKRINMETDADFFFSSSSTSTTTTTPSIFTHTNTSISTTSSSSSSSNSDSCNKQHSKLTLQNDSNTSQTMSEENEKDSKGCKKRKLLESPTNERCCPSYRGVRMRNWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHSAYLNFPELAQELPTPASTSPKDIQAAAAKAANTHFEVVVNRCQSTVLEEEGEEEKERRQVEHVSMDNTQDSSSSNSTIDDDETLFDLPDLFPHELSSWHLCAVGSGFRLQESLFWENY 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00084 268 MobiDBLite consensus disorder prediction 198 214 - -
Viun10g00084 268 MobiDBLite consensus disorder prediction 198 229 - -
Viun10g00084 268 MobiDBLite consensus disorder prediction 16 85 - -
Viun10g00084 268 PRINTS Ethylene responsive element binding protein signature 122 138 IPR001471 GO:0003700|GO:0006355
Viun10g00084 268 PRINTS Ethylene responsive element binding protein signature 100 111 IPR001471 GO:0003700|GO:0006355
Viun10g00084 268 MobiDBLite consensus disorder prediction 16 70 - -
Viun10g00084 268 Gene3D AP2/ERF domain 99 157 IPR036955 GO:0003700|GO:0006355
Viun10g00084 268 Pfam AP2 domain 98 149 IPR001471 GO:0003700|GO:0006355
Viun10g00084 268 ProSiteProfiles AP2/ERF domain profile. 99 156 IPR001471 GO:0003700|GO:0006355
Viun10g00084 268 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 60 243 - -
Viun10g00084 268 MobiDBLite consensus disorder prediction 71 85 - -
Viun10g00084 268 SUPERFAMILY DNA-binding domain 99 157 IPR016177 GO:0003677
Viun10g00084 268 CDD AP2 98 158 IPR001471 GO:0003700|GO:0006355
Viun10g00084 268 SMART rav1_2 99 162 IPR001471 GO:0003700|GO:0006355
Viun10g00084 268 MobiDBLite consensus disorder prediction 215 229 - -
Viun10g00084 268 FunFam Ethylene-responsive transcription factor 2 99 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00084 Viun-Chr10 543122 544133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00084 98 264 AP2-EREBP Transcription Factor Family AT2G44940 53.061 6.72e-59 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Viun10g00084 AP2 1.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00084 - - gsj:114420351 298.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g00084 10 543122 544133 Viun10g00084 10 543122 544133 ECH