Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00079 ATGGGAACGTTAAAGTCGTATCTTCCAGTAATGGGTATGGTGTTTAATCAGTTCATTTATACAGGACTTAGTCTCAGCACAAGACTTGTTTTCTCAGAAGGAATGAATCCAAGGGTCTTTGTGGTCTATCGCCATCTTCTTGCAACCATTGTAATTGCTCCAATAGCTTATTTATCAGGGAGAAATTCTGGTTCCTATTACTTAAACTTGAAGAGTTTTTCCTGGATATTCTTGGTCTCCTTCGTAGGGATTACCTTGAATCAAAATCTGTTTTGCGAGGGTTTATACCTGACAAATTCTTCAGTGGCAACTGCAATGGTGAATCTTGTTCCAGCAGTAACATTTGTGATAGCAGTTTGTGCAGGAATGGAGAAAGTGAGCATTGGAAGCTTGAGATCCATAGCGAAGATAGTAGGAACAGTGATATGTGTGAGTGGAGCAGTGTCCATAGCTTTGTTGAAGGGTCCAAAGCTTCTAAATGCAGAAAACCTGCCATCAAAATCCATCATCATGGCCTCCTCAGCAACTGATAATTGGTTCCTTGGTTGTCTCTTTCTCATTGGATGCTGCTTCTCTTGGTCAACCTGGCTCATACTGATGGTTCCTGCCTCCAAAAGCCACCCAGATCCCTTGTCCTTTTCGGCTTGGATGTGTTTTATAGCAACAGTGCAATCAGCTTTAGTGACACTACTGTTGGAACCAGATCCAAATACATGGAAGATTAATTCTTTACTTGAAGTTGGTTCTGCTTTATATGGAGGAGTTATGGGATCTGCAGTATCATTCTTTCTCCAAGCATGGTGCATCTCAATCACAGGTCCTCTTTTCAGTGCAATGTTCAATCCTCTTATGGCAGTGTTTGTCACCATATTGGCTCCTTTTCTACTACAGGAGGAAGTATACGTTGGAAGCTTGACTGGCTCAATAGCAGTGATCATTGGGTTGTATATTGTGCTTTGGGGAAAAGCTGAAGAAGTTGTGAATGTTAAGAGAGATTCAGAATCAATGCTTAATTCCACAGAGGAAGTCAAAATATCCATAAACAAGGATTCTTCTTCAGTAAAAGAATGTTGTAAAACCAATTTGGAAGAACCCCTTCTATCTCCTCATTCTCCTTCACATAATTAA 1128 0.4051 MGTLKSYLPVMGMVFNQFIYTGLSLSTRLVFSEGMNPRVFVVYRHLLATIVIAPIAYLSGRNSGSYYLNLKSFSWIFLVSFVGITLNQNLFCEGLYLTNSSVATAMVNLVPAVTFVIAVCAGMEKVSIGSLRSIAKIVGTVICVSGAVSIALLKGPKLLNAENLPSKSIIMASSATDNWFLGCLFLIGCCFSWSTWLILMVPASKSHPDPLSFSAWMCFIATVQSALVTLLLEPDPNTWKINSLLEVGSALYGGVMGSAVSFFLQAWCISITGPLFSAMFNPLMAVFVTILAPFLLQEEVYVGSLTGSIAVIIGLYIVLWGKAEEVVNVKRDSESMLNSTEEVKISINKDSSSVKECCKTNLEEPLLSPHSPSHN 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00079 375 Pfam EamA-like transporter family 181 319 IPR000620 GO:0016020
Viun10g00079 375 Pfam EamA-like transporter family 31 144 IPR000620 GO:0016020
Viun10g00079 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 216 322 - -
Viun10g00079 375 PANTHER WAT1-RELATED PROTEIN 8 332 IPR030184 GO:0016020|GO:0022857
Viun10g00079 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00079 Viun-Chr10 500297 504264 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00079 1 375 Nodulin-like Gene Family AT4G30420 49.606 1.55e-125 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00079 - - gmx:100812331 553.903