Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00066 ATGGCCGAGTGGGAGAAGTTGAGTGTTCTCGGGGAAGGTTCATATGGCACAGTGTATCTTGTTGGTGTGCATCTTCTAGAAGAACACAATTCAAAGTTCTTACTTTTAGCTTTGAAGACAAGTTCTTCTTATACAATGCTAAGGGAGAAAAAGGTTTTGGAGTTATTATTGGGTTGTGAAGGAATTGTTCAATGTTATTTTTACAAATACATTGTTGAGAGAGGTTGTTTAACTTACAACCTTTTCATGGAGTATGCCCCTCATGGTTCTCTAGGTGATTTAATAAAGACAGAGTTATTATCCGACAAGGAAGTGATCGTCTACACTCACATGATTCTCAAGGGACTTTCTTGCATGCACGAAAAGGGAATTGTTCATTGTGATCTTAAATCGAATAATATTCTCCTCTTTCCTTCATCAGATGGTCGTGCAAAATATAAACTAAAGATTGCTGATTTTGGATTGTCCAAGACTAGAGAAGAGGCAAATACTGATTTAGGAGAGATCAAGTTCAGAGGGACACCCTACTATATGTCGCCGGAATCAGTTAGAGGTTTTAAGGAAACACCTTTAGATATATGGTCTCTCGGATGCATTGTTATTGAGATGAGCACTGGACTTAGAGAATGGTGGAACTTCCAAACCAGAGACCAATTATTGTGGAAGCTTGCATTTTTTGAAGAAGCACCGAAGATACCAGATAAACTTAGTTACGATTGCAAAAACTTTTTGGAAAAGTGTTTGATGAAAAATCCTGAACAAAGATGGACAGCTAAAATGCTTCTGGATCATCCTTTTATTTAA 804 0.3744 MAEWEKLSVLGEGSYGTVYLVGVHLLEEHNSKFLLLALKTSSSYTMLREKKVLELLLGCEGIVQCYFYKYIVERGCLTYNLFMEYAPHGSLGDLIKTELLSDKEVIVYTHMILKGLSCMHEKGIVHCDLKSNNILLFPSSDGRAKYKLKIADFGLSKTREEANTDLGEIKFRGTPYYMSPESVRGFKETPLDIWSLGCIVIEMSTGLREWWNFQTRDQLLWKLAFFEEAPKIPDKLSYDCKNFLEKCLMKNPEQRWTAKMLLDHPFI 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00066 267 SUPERFAMILY Protein kinase-like (PK-like) 3 267 IPR011009 -
Viun10g00066 267 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 4 267 - -
Viun10g00066 267 Gene3D Transferase(Phosphotransferase) domain 1 1 267 - -
Viun10g00066 267 ProSiteProfiles Protein kinase domain profile. 4 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g00066 267 ProSitePatterns Protein kinases ATP-binding region signature. 10 39 IPR017441 GO:0005524
Viun10g00066 267 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Viun10g00066 267 SMART serkin_6 4 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g00066 267 Pfam Protein kinase domain 5 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00066 Viun-Chr10 387617 388420 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00066 3 267 MAP Kinase Kinase Kinase AT4G36950 42.294 1.13e-60 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Viun10g00066 Pkinase 3.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00066 - - vum:124830341 371.318