Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00065 ATGGAGTATGCCCCTCATGTTTCTCTAGGTGATTTAATAAAGACAGAGTTATTATCCGACAAGGAAGTGATACTTGTTGACATATTGCAGCTGGTGAAGATATATCTTGGATCAATTCTTAGAGGTTTTTGCTTATGTTTGGACCTTGGAGAAAGAGTTTGTGGTAGCCAGGGCTATGCTACCATTGAGGAGAGATCAAGTTCAGAGGGACACCCTACTATATGTCGCCAGAATCAGTTAGAGGTTTTAAGGAAAACACCTTTAGATATATGGTCTCTCGGATGCATTGTTATTGAGATGAGCACTAGACTTAGAGAATGGTTGAACTTCCAAACCAGAGACCAATTATTGTGGAGACTTGCATTTCTTGAAGAAACACCGAAGATACCAGATAAACTTAGTTGCGATTGCAAGGATTTTTTGGGGAAGTGTCTGATTAAAAATCCTGAACAAAGATGGACAACTAAAATGCTTCTGGATCATCCTTTTATTCAAAAGGAATATCAAATTTTATCACCTACGTGTAATACTTAG 534 0.3801 MEYAPHVSLGDLIKTELLSDKEVILVDILQLVKIYLGSILRGFCLCLDLGERVCGSQGYATIEERSSSEGHPTICRQNQLEVLRKTPLDIWSLGCIVIEMSTRLREWLNFQTRDQLLWRLAFLEETPKIPDKLSCDCKDFLGKCLIKNPEQRWTTKMLLDHPFIQKEYQILSPTCNT 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00065 177 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 85 166 - -
Viun10g00065 177 Gene3D Transferase(Phosphotransferase) domain 1 40 170 - -
Viun10g00065 177 Pfam Protein kinase domain 85 164 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g00065 177 ProSiteProfiles Protein kinase domain profile. 1 164 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g00065 177 SUPERFAMILY Protein kinase-like (PK-like) 85 170 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00065 Viun-Chr10 383171 385130 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00065 32 164 MAP Kinase Kinase Kinase AT5G67080 33.742 9.68e-21 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Viun10g00065 Pkinase 5.2e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00065 - K20716 vun:114166895 367.851