Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00053 ATGGCATCTTCAACACTGTGTTTCGTTCTTCTCCTTTCTCTGATGTTGTTCCATAATTTCCATGCTTCGTCTTCTTTATCTCTTTCCGTCGAAAACTTCAAAAAAGATGTGATAGAGTCATCGCCGGAAAAAACATTCACAGCAGGCTTTTACGCCGTCGGAGAAAACGCTTTCTGCTTCGCAATATGGTACACGCGCTCACCGGACACCGTCGTTTGGATGGCCAACCGGGACCAGCCGGTTAACGGAAAACGCTCCACGCTATCCCTTCTCACGACCGGCAACCTCGTACTCACCGACGCCGGCCAGTTCCAAGTGTGGTCCACCAACACCGCCGCCGAATCCAGACAAGTCCAGTTACGTTTGCACGACAACGGCAACCTCGTACTCCTCGAAAGCCGGAACAGTTCCTCCGAGGTTGTGATGTGGCAGAGCTTCCATTTCCCAACCGACACGCTTCTTCCCGGACAATCTCTGACGAAGAGCAGCAGCCTGGTTTCCTCGAGAAGCGGGAGCAACTACTCCTCCGGTTTCTACAGGCTCTTCTTCGACTCCGAGAATGTTCTTCGCATCATGTACCAGGGTCCTCAAGTTTCCAGCGTTTATTGGCCGGACCCTTGGCTTCAGAATAACAACTTCGGGAACGGTGGCGCCGGAAACGGTAGATCCACTTACAACGATAGCAGGGTCGCCGTGCTTGATGATTTGGGGTACCTGGTTTCTTCCGATAACTTCACTTTCAGAAGCATTGACTACGGCACGGTGCTGCAACGGAGGTTGACCCTCGATCACGACGGTGGTGCGAGGATGTACAGCAGGAACAATGGGGAAGAGAAGTGGACAATGGCAGGGGAATTTCGCTCGCATCCATGCTACGTTCATGGGATTTGTGGGGCTAACAGTTATTGCAAATACGACCCTCCCAGTGGAAGAAAGTGTTCGTGCCTTCCAGGTCATTCCTGGGTTGATAGCGAAGACTGGTCTCAAGGTTGCAAACCAACCTTCGAGATTTTGTGCAGCAGCAACAACAACAGAACCGAGGACGAGACTCGCTTCCTGCGCATACCTGATGTTGATTTCTACGGATACGACTATGGATACTTTGGAAATTACACCTATCAACAGTGTGAGAATCTCTGCTCGCAGATGTGCGAATGCAGAGGGTTTCAACACAGCTTCTCAGTGGAAAATGCTTTCTTTCAGTGCTACCCGAAGACCCATTTGCGTAATGGGAATAGTCAACCAGGTTTCATGGGGTCATTCTTCCTGAAACTTCCTTCATCTTCTCGTGTTGAGTTTGAGAACAACATAAAAAAGAATGGCTTGGTTTGTGGGGGAGATAGTGATCAGGGCGCAGAGCTGCTTCACAGATCGTATGTCAAAGAGGGAGAAAATGGATCGGTGAAGTTCATGCTGTGGTTTGCAAGCGCCTTGGGAGGAGTTGAACTGGTGTGCATCTTTCTGGTGTGGTGTTTCTTGTTTAGGAATAACAGAACGTTACCCTCAGGTGCTGAGGGACAAGGGTATGTTCTTGCAGCGGCTGTGGGATTCAGGAAATTCAGTTACTCTGAGCTGAAACAAGCCACCAAAGGTTTCAATGAAGAGATAGGAAGAGGTGGTGGAGGTACAGTGTATAAGGGTGTCTTGGAAGATAATCAAATCGTGGCGATAAAAAGATTACACGAAGTAGCAAACCAAGGAGAGAGTGAGTTTCTGGCAGAGGTAAGCATCATTGGAAGGCTTAACCACATGAACTTGATATGCATGTTGGGGTATTGTGCAGAGGGAAAGCATAGGTTGTTGGTTTATGAGTACATGGAGAATGGTTCTTTGGCTCAGAACCTTTCATCAGCTTCAAATGTGCTTGACTGGAGCAAAAGGTATATCATTGCCCTGGGAACAGCAAGGGGTCTGGCATACTTGCATGAAGAATGCTTGGAGTGGATTCTGCATTGTGACATCAAGCCACAAAATATACTTCTTGACTCTGATTACAAACCAAAAGTAGGGGATTTTGGGTTGTCTAAGCTACTTAACAGGAACAACCTCAACAATTCAAGCTTTTCAAGGATACGAGGAACAAGAGGTTACATGGCACCTGAATGGGTGTTCAACCTGCCAATCACTTCCAAGGTGGATGTCTACAGCTATGGCATTGTTGTGTTGGAGATGATCACTGGAAGGAGTCCAACAACAGGTGCTCCAATCACAGAGTTAGAAGCAGAGTCAACTCATCATGAGAGGTTGGTGACATGGGTGAGGGAGAAAAGGATGAAAGGATCAGAAAATGGATCATCTTGGGTGGATCAAATTGTTGACCCTGCTTTGGGAACAAACTATGACATGAATGAAGTGGAGATATTGGCAACAGTGGCTTTGGAATGTGTGGAGGAAGAGAAAAATGCTAGGCCCAGCATGAGTCGAGTAACAGAGAAGCTGCAGAGTCATATGCACACGATTGTTGATGTTTTGAACAAAGAATAG 2484 0.4762 MASSTLCFVLLLSLMLFHNFHASSSLSLSVENFKKDVIESSPEKTFTAGFYAVGENAFCFAIWYTRSPDTVVWMANRDQPVNGKRSTLSLLTTGNLVLTDAGQFQVWSTNTAAESRQVQLRLHDNGNLVLLESRNSSSEVVMWQSFHFPTDTLLPGQSLTKSSSLVSSRSGSNYSSGFYRLFFDSENVLRIMYQGPQVSSVYWPDPWLQNNNFGNGGAGNGRSTYNDSRVAVLDDLGYLVSSDNFTFRSIDYGTVLQRRLTLDHDGGARMYSRNNGEEKWTMAGEFRSHPCYVHGICGANSYCKYDPPSGRKCSCLPGHSWVDSEDWSQGCKPTFEILCSSNNNRTEDETRFLRIPDVDFYGYDYGYFGNYTYQQCENLCSQMCECRGFQHSFSVENAFFQCYPKTHLRNGNSQPGFMGSFFLKLPSSSRVEFENNIKKNGLVCGGDSDQGAELLHRSYVKEGENGSVKFMLWFASALGGVELVCIFLVWCFLFRNNRTLPSGAEGQGYVLAAAVGFRKFSYSELKQATKGFNEEIGRGGGGTVYKGVLEDNQIVAIKRLHEVANQGESEFLAEVSIIGRLNHMNLICMLGYCAEGKHRLLVYEYMENGSLAQNLSSASNVLDWSKRYIIALGTARGLAYLHEECLEWILHCDIKPQNILLDSDYKPKVGDFGLSKLLNRNNLNNSSFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMITGRSPTTGAPITELEAESTHHERLVTWVREKRMKGSENGSSWVDQIVDPALGTNYDMNEVEILATVALECVEEEKNARPSMSRVTEKLQSHMHTIVDVLNKE 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00053 827 Gene3D Phosphorylase Kinase; domain 1 505 605 - -
Viun10g00053 827 Pfam S-locus glycoprotein domain 255 319 IPR000858 GO:0048544
Viun10g00053 827 Pfam D-mannose binding lectin 70 162 IPR001480 -
Viun10g00053 827 Pfam Protein kinase domain 533 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g00053 827 ProSiteProfiles Protein kinase domain profile. 530 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g00053 827 SMART serkin_6 530 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g00053 827 FunFam Serine/threonine-protein kinase 606 820 - -
Viun10g00053 827 ProSiteProfiles Bulb-type lectin domain profile. 23 143 IPR001480 -
Viun10g00053 827 SMART blect_4 29 149 IPR001480 -
Viun10g00053 827 Gene3D Transferase(Phosphotransferase) domain 1 606 824 - -
Viun10g00053 827 ProSitePatterns Serine/Threonine protein kinases active-site signature. 649 661 IPR008271 GO:0004672|GO:0006468
Viun10g00053 827 CDD STKc_IRAK 536 814 - -
Viun10g00053 827 FunFam S-receptor-like serine/threonine-protein kinase 501 605 - -
Viun10g00053 827 SUPERFAMILY alpha-D-mannose-specific plant lectins 59 206 IPR036426 -
Viun10g00053 827 PANTHER OS07G0415500 PROTEIN 7 817 - -
Viun10g00053 827 SUPERFAMILY Protein kinase-like (PK-like) 514 813 IPR011009 -
Viun10g00053 827 ProSitePatterns Protein kinases ATP-binding region signature. 536 558 IPR017441 GO:0005524
Viun10g00053 827 CDD B_lectin 40 149 IPR001480 -
Viun10g00053 827 Gene3D - 29 148 IPR036426 -
Viun10g00053 827 PIRSF SRK 1 825 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00053 Viun-Chr10 291828 294658 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00053 520 825 Trihelix Transcription Factor Family AT5G38560 43.226 5.24e-72 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Viun10g00053 Pkinase 8.8e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00053 - - gmx:100808940 1290.4