Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00047 ATGGCTTCTTCAACACTGTGTTTGGCTATTCTCATTCCTTTGATATTCTTCCACAATTTGCATGCTTCATCGTCCTTCTCTCTCTCCGTAGAGAACTTCAAAGAAGAAGTGATAGTGTCATCACCCAAACCAACGTTCACAGTAGGCTTTTACGCCGTCGGAAAAAATGCTTTCTGCTTCGCAGTATGGTACACTCACTCACCCGACACCCTTGTTTGGATCGCCAACCGGGACCAACCGGTTAACGGAAAACGATCCACGCTCTCCCTTCTCAAAACCGGCAACCTCGTACTCACCGACGCCGGCCAGTTCCAAGTGTGGTCCACCAACACAGCCACCGCATCCGAACAAGTCCGCTTACATTTGCACGACTCCGGCAACCTCGTACTCCTCGAAGATTCCTCCGACAACGCTGTTTTGTGGCAGAGCTTCGATTTCCCAACCGACACGCTTCTTCCGGATCAACCTCTGCAAGGGAGCACCAACCTCGTTTCCTCGAGAAGTGGGAGCAACTACTCCTCCGGTTTCTACAGGCTCTTCTTCGACTTCGAGAACGTTCTACGCCTCATGTACAAGGGTCCTCGAGTTTCCAGCGTTTTCTGGCCTTACGCTTGGCTTCAGAGCAATAACTTCGGGAATGGCAACGGCAATGGTAGATCCATTTTCAACGATAGCAGGGTTGTTGTGATGGATGATTTAGGCTATTTGGTTTCTTCTGATAACTTCACTTTCAAAACAAGTGATTACGGAATGAGACTCCTACGCAGATTGACTCTTGATCACGACGGCAACGTTCGCTTTTATAGCATGAAAGACGGAGAAGACAAGTGGTCTGTGTCAGGACTATTTCGACAACAACCTTGTTTTATTCATGGGATTTGTGGACCCGACAGTATTTGCAGCTATGAGCCAAGAAACGGAAGAAAGTGTTCCTGTAGTCCAGGGTATAGATGGTTTGATAGTGAAGACTGGTCTCAAGGTTGCATACCCAGTTTCCAACTTTGGTGCAACAACACTGAGCAAAAATCTCGTTTTCTAAGCTTACCTGGAGTTGATTTTTATGGATATGACTATGGCCTCTTTGACAATCACACCAACCGACAATGTGCGAGTCTGTGCTCGCAGTTGTGCGAATGCAAAGGGTTTCAATACAAGCCTGTGAGGGGTGCTAATGGTCAGTGCTATCTCAAGACACAGTTGTTAAATGGCCATCGTGCACCGAGTTTCACCAATTCATTCTTCCTGAGACTGCCTTTGCTCCTCCATGACTATGATGAGAGCGCTAGCAATAATGGTTTGGTTTGTGGAAGAAACGGTGGAGGAATTATAGAACTTGAGAGGCCTTACGTTGAAGAAAAAGAAAATGAGTTGGTGAAGTTCATGTTATGGTTTGCGATTTCCTTCGGAGGAATTGAGGTCGTGTGCATCTTTATGGTGTGGTGTTTCCTGTTTAGGAATAACAGGATGTTACCCAGACAAGGTTATGTTCTTGCAGCTGCAACGGGATTTAGAAAATTCAGTTACTCTGAACTGAAGCATGCCACTAAAGGTTTCAGTGAAGAGATTGGAAGAGGGGGTGGAGGTACCGTTTATAAAGGGTTCTTGTCTGATGATCGAGTTGTGGCGATAAAAAGACTACACGAAGTAGCAAACCAAGGAGAGAGTGAGTTTCTGGCAGAGGTAAGCATCATTGGAAGGCTTAACCACATGAACTTGATATGCATGTTGGGGTATTGTGCAGAGGGAAAGCATAGGTTGTTGGTTTATGAGTACATGGAGAATGGTTCTTTGGCTCAGAACCTTTCATCAGCTTCAAATGTGCTTGACTGGAGCAAAAGGTATAACATTGCCCTGGGAACAGCAAGGGGTCTGGCATACTTGCATGAAGAATGCTTGGAGTGGATTCTGCATTGTGACATCAAGCCCCAAAATATACTTCTTGACTCTGATTATAAACCAAAAGTAGGGGATTTTGGGTTGTCTAAGCTACTTAACAGGAACAACCTCAACAATTCAAGCTTTTCAAGGATACGAGGAACAAGAGGTTACATGGCACCTGAATGGGTTTTCAACTTGCCAATCACTTCCAAGGTGGATATCTACAGCTATGGCATTGTTGTGTTGGAGATGATCACTGGAAGGAGCCCAACAACAGGTGCTCAAATCACAGAGATAGAAGCAGAGACACCTCATCATGAGAGGTTGGTGACATGGGTGAGGGAGAAAAGGATGAAAGGATCAGAAAATGGATCATCTTGGGTGGATCAAATTGTTGACCCTGCTTTGGGAACAAACTATGACATGAATGAAGTGGAGATATTGGCAACAGTGGCTTTGGAATGTGTAAAGGAAGACAGAGAGGGGAGACCTAACATGAGTCAAGTTGCTGAGAGGCTCCAAATTCATGAACATGATTCTTAA 2421 0.4535 MASSTLCLAILIPLIFFHNLHASSSFSLSVENFKEEVIVSSPKPTFTVGFYAVGKNAFCFAVWYTHSPDTLVWIANRDQPVNGKRSTLSLLKTGNLVLTDAGQFQVWSTNTATASEQVRLHLHDSGNLVLLEDSSDNAVLWQSFDFPTDTLLPDQPLQGSTNLVSSRSGSNYSSGFYRLFFDFENVLRLMYKGPRVSSVFWPYAWLQSNNFGNGNGNGRSIFNDSRVVVMDDLGYLVSSDNFTFKTSDYGMRLLRRLTLDHDGNVRFYSMKDGEDKWSVSGLFRQQPCFIHGICGPDSICSYEPRNGRKCSCSPGYRWFDSEDWSQGCIPSFQLWCNNTEQKSRFLSLPGVDFYGYDYGLFDNHTNRQCASLCSQLCECKGFQYKPVRGANGQCYLKTQLLNGHRAPSFTNSFFLRLPLLLHDYDESASNNGLVCGRNGGGIIELERPYVEEKENELVKFMLWFAISFGGIEVVCIFMVWCFLFRNNRMLPRQGYVLAAATGFRKFSYSELKHATKGFSEEIGRGGGGTVYKGFLSDDRVVAIKRLHEVANQGESEFLAEVSIIGRLNHMNLICMLGYCAEGKHRLLVYEYMENGSLAQNLSSASNVLDWSKRYNIALGTARGLAYLHEECLEWILHCDIKPQNILLDSDYKPKVGDFGLSKLLNRNNLNNSSFSRIRGTRGYMAPEWVFNLPITSKVDIYSYGIVVLEMITGRSPTTGAQITEIEAETPHHERLVTWVREKRMKGSENGSSWVDQIVDPALGTNYDMNEVEILATVALECVKEDREGRPNMSQVAERLQIHEHDS 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00047 806 PANTHER OS07G0415500 PROTEIN 14 800 - -
Viun10g00047 806 Pfam Protein kinase domain 519 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g00047 806 ProSiteProfiles Protein kinase domain profile. 516 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g00047 806 ProSiteProfiles Bulb-type lectin domain profile. 24 143 IPR001480 -
Viun10g00047 806 Gene3D Hepatocyte Growth Factor 346 412 - -
Viun10g00047 806 Gene3D - 29 146 IPR036426 -
Viun10g00047 806 CDD B_lectin 35 147 IPR001480 -
Viun10g00047 806 SUPERFAMILY Protein kinase-like (PK-like) 499 802 IPR011009 -
Viun10g00047 806 SMART ntp_6 340 417 IPR003609 -
Viun10g00047 806 SMART serkin_6 516 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g00047 806 Pfam PAN domain 346 399 IPR003609 -
Viun10g00047 806 FunFam Serine/threonine-protein kinase 592 806 - -
Viun10g00047 806 ProSitePatterns Protein kinases ATP-binding region signature. 522 544 IPR017441 GO:0005524
Viun10g00047 806 SMART blect_4 29 147 IPR001480 -
Viun10g00047 806 Pfam S-locus glycoprotein domain 241 317 IPR000858 GO:0048544
Viun10g00047 806 Gene3D Phosphorylase Kinase; domain 1 486 591 - -
Viun10g00047 806 Gene3D Transferase(Phosphotransferase) domain 1 592 806 - -
Viun10g00047 806 ProSiteProfiles PAN/Apple domain profile. 336 418 IPR003609 -
Viun10g00047 806 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Viun10g00047 806 CDD STKc_IRAK 522 800 - -
Viun10g00047 806 Pfam D-mannose binding lectin 70 158 IPR001480 -
Viun10g00047 806 PIRSF SRK 1 805 IPR024171 GO:0004674
Viun10g00047 806 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 201 IPR036426 -
Viun10g00047 806 FunFam S-receptor-like serine/threonine-protein kinase 485 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00047 Viun-Chr10 272074 275116 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00047 506 803 Trihelix Transcription Factor Family AT5G38560 44.186 2.47e-72 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Viun10g00047 Pkinase 1.6e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00047 - - gmx:100786566 1287.71